RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 LINC01545Q5VT33 79 aa7.83□□□□□ -1.16
TRAIP-211ENST00000491060 PET117Q6UWS5 81 aa7.83□□□□□ -1.16
TRAIP-211ENST00000491060 Q9BRP9 147 aa7.83□□□□□ -1.16
TRAIP-211ENST00000491060 IGLV7-46A0A075B6I9 117 aa7.82□□□□□ -1.16
TRAIP-211ENST00000491060 LOC107984156A0A0G2JMH3 177 aa7.82□□□□□ -1.16
TRAIP-211ENST00000491060 TRBV10-2A0A0K0K1G8 114 aa7.82□□□□□ -1.16
TRAIP-211ENST00000491060 ARL17AQ8IVW1 177 aa7.82□□□□□ -1.16
TRAIP-211ENST00000491060 ST20-AS1Q8NBB2 130 aa7.81□□□□□ -1.16
TRAIP-211ENST00000491060 LINC00308Q8TCZ7 52 aa7.81□□□□□ -1.16
TRAIP-211ENST00000491060 IGLV6-57P01721 117 aa7.8□□□□□ -1.16
TRAIP-211ENST00000491060 S100A6P06703 90 aa7.8□□□□□ -1.16
TRAIP-211ENST00000491060 C9orf153Q5TBE3 101 aa7.8□□□□□ -1.16
TRAIP-211ENST00000491060 Q6ZRX8 168 aa7.8□□□□□ -1.16
TRAIP-211ENST00000491060 LITAFQ99732 161 aa7.8□□□□□ -1.16
TRAIP-211ENST00000491060 ZNF73O43830 326 aaPredicted RBP7.79□□□□□ -1.16
TRAIP-211ENST00000491060 NDUFC2O95298 119 aa7.79□□□□□ -1.16
TRAIP-211ENST00000491060 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
TRAIP-211ENST00000491060 ANKRD39Q53RE8 183 aa7.78□□□□□ -1.16
TRAIP-211ENST00000491060 SCGB1D4Q6XE38 83 aa7.77□□□□□ -1.17
TRAIP-211ENST00000491060 COA6Q5JTJ3 125 aaKnown RBP7.76□□□□□ -1.17
TRAIP-211ENST00000491060 SPANXCQ9NY87 97 aa7.76□□□□□ -1.17
TRAIP-211ENST00000491060 C20orf202A1L168 122 aa7.75□□□□□ -1.17
TRAIP-211ENST00000491060 JOSD1Q15040 202 aaPredicted RBP7.75□□□□□ -1.17
TRAIP-211ENST00000491060 LINC00483Q53H64 154 aa7.75□□□□□ -1.17
TRAIP-211ENST00000491060 SPAG11AQ6PDA7 123 aa7.75□□□□□ -1.17
TRAIP-211ENST00000491060 HRCT1Q6UXD1 115 aa7.75□□□□□ -1.17
TRAIP-211ENST00000491060 C5orf52A6NGY3 159 aa7.74□□□□□ -1.17
TRAIP-211ENST00000491060 HINT1P49773 126 aaPredicted RBP7.74□□□□□ -1.17
TRAIP-211ENST00000491060 PCP2Q8IVA1 136 aa7.74□□□□□ -1.17
TRAIP-211ENST00000491060 TIMM17BO60830 172 aa7.73□□□□□ -1.17
TRAIP-211ENST00000491060 DEFB105AQ8NG35 78 aa7.73□□□□□ -1.17
TRAIP-211ENST00000491060 SNRPEP62304 92 aaKnown RBP7.72□□□□□ -1.17
TRAIP-211ENST00000491060 LOC105371267A0A1B0GV96 52 aa7.71□□□□□ -1.18
TRAIP-211ENST00000491060 COX7BP24311 80 aa7.71□□□□□ -1.18
TRAIP-211ENST00000491060 C6orf99Q4VX62 202 aa7.71□□□□□ -1.18
TRAIP-211ENST00000491060 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
TRAIP-211ENST00000491060 A6NDN8 102 aa7.7□□□□□ -1.18
TRAIP-211ENST00000491060 MUSTN1Q8IVN3 82 aa7.7□□□□□ -1.18
TRAIP-211ENST00000491060 SPANXDQ9BXN6 97 aa7.7□□□□□ -1.18
TRAIP-211ENST00000491060 MUC2Q02817 5179 aa7.7□□□□□ -1.18
TRAIP-211ENST00000491060 S100A2P29034 98 aa7.69□□□□□ -1.18
TRAIP-211ENST00000491060 TPRXLQ17RH7 258 aa7.69□□□□□ -1.18
TRAIP-211ENST00000491060 SPINK1P00995 79 aa7.68□□□□□ -1.18
TRAIP-211ENST00000491060 Q1RN00 199 aa7.68□□□□□ -1.18
TRAIP-211ENST00000491060 HIST3H2BBQ8N257 126 aa7.68□□□□□ -1.18
TRAIP-211ENST00000491060 TAL2Q16559 108 aa7.67□□□□□ -1.18
TRAIP-211ENST00000491060 SSBP3-AS1Q7Z2R9 100 aa7.67□□□□□ -1.18
TRAIP-211ENST00000491060 CBY1Q9Y3M2 126 aa7.67□□□□□ -1.18
TRAIP-211ENST00000491060 LINC00518Q8N0U6 118 aa7.66□□□□□ -1.18
TRAIP-211ENST00000491060 Q8N377 158 aa7.66□□□□□ -1.18
TRAIP-211ENST00000491060 DHRS4-AS1Q9P1J3 65 aa7.66□□□□□ -1.18
TRAIP-211ENST00000491060 HIST1H2BLQ99880 126 aa7.65□□□□□ -1.18
TRAIP-211ENST00000491060 A0A0G2JQZ4 141 aa7.64□□□□□ -1.19
TRAIP-211ENST00000491060 H7C2G1 150 aa7.64□□□□□ -1.19
TRAIP-211ENST00000491060 ELOF1P60002 83 aaKnown RBP7.64□□□□□ -1.19
TRAIP-211ENST00000491060 FP248Q71RG6 208 aaPredicted RBP7.64□□□□□ -1.19
TRAIP-211ENST00000491060 KRTAP13-3Q3SY46 172 aa7.63□□□□□ -1.19
TRAIP-211ENST00000491060 LAMTOR3Q9UHA4 124 aa7.63□□□□□ -1.19
TRAIP-211ENST00000491060 SLC25A20O43772 301 aa7.62□□□□□ -1.19
TRAIP-211ENST00000491060 AKR1D1P51857 326 aa7.62□□□□□ -1.19
TRAIP-211ENST00000491060 A0A0U1RQV1 116 aa7.61□□□□□ -1.19
TRAIP-211ENST00000491060 HSBP1L1C9JCN9 74 aa7.61□□□□□ -1.19
TRAIP-211ENST00000491060 SCGB1D1O95968 90 aa7.61□□□□□ -1.19
TRAIP-211ENST00000491060 IFITM1P13164 125 aa7.61□□□□□ -1.19
TRAIP-211ENST00000491060 CTAG1AP78358 180 aa7.61□□□□□ -1.19
TRAIP-211ENST00000491060 COPS9Q8WXC6 57 aa7.61□□□□□ -1.19
TRAIP-211ENST00000491060 C12orf57Q99622 126 aa7.61□□□□□ -1.19
TRAIP-211ENST00000491060 SMIM6P0DI80 62 aa7.59□□□□□ -1.19
TRAIP-211ENST00000491060 SLC25A34Q6PIV7 304 aa7.59□□□□□ -1.19
TRAIP-211ENST00000491060 SMIM11BQ8TCY0 68 aa7.59□□□□□ -1.19
TRAIP-211ENST00000491060 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
TRAIP-211ENST00000491060 SPRR1BP22528 89 aa7.58□□□□□ -1.2
TRAIP-211ENST00000491060 TEX49A0A1B0GTD5 131 aa7.57□□□□□ -1.2
TRAIP-211ENST00000491060 A0A1B0GWB2 263 aa7.57□□□□□ -1.2
TRAIP-211ENST00000491060 FAT4Q6V0I7 4981 aa7.56□□□□□ -1.2
TRAIP-211ENST00000491060 TRAV13-2A0A0B4J235 113 aa7.56□□□□□ -1.2
TRAIP-211ENST00000491060 A4D1N5 150 aa7.56□□□□□ -1.2
TRAIP-211ENST00000491060 Q6ZVH6 145 aa7.56□□□□□ -1.2
TRAIP-211ENST00000491060 RPS29P62273 56 aaKnown RBP7.55□□□□□ -1.2
TRAIP-211ENST00000491060 LINC01547P58512 204 aaPredicted RBP7.54□□□□□ -1.2
TRAIP-211ENST00000491060 SMIM29Q86T20 159 aa7.54□□□□□ -1.2
TRAIP-211ENST00000491060 LIMD2Q9BT23 127 aa7.54□□□□□ -1.2
TRAIP-211ENST00000491060 TRBV7-6A0A0J9YX20 115 aa7.53□□□□□ -1.2
TRAIP-211ENST00000491060 KRTAP4-1Q9BYQ7 146 aa7.53□□□□□ -1.2
TRAIP-211ENST00000491060 PRO1933Q9H354 126 aa7.53□□□□□ -1.2
TRAIP-211ENST00000491060 PYY3Q5JQD4 70 aa7.52□□□□□ -1.21
TRAIP-211ENST00000491060 XP32Q5T750 250 aa7.52□□□□□ -1.21
TRAIP-211ENST00000491060 HIST1H4GQ99525 98 aa7.52□□□□□ -1.21
TRAIP-211ENST00000491060 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
TRAIP-211ENST00000491060 VAMP3Q15836 100 aa7.5□□□□□ -1.21
TRAIP-211ENST00000491060 ASB16-AS1Q495Z4 193 aa7.5□□□□□ -1.21
TRAIP-211ENST00000491060 C14orf144Q96I85 54 aa7.5□□□□□ -1.21
TRAIP-211ENST00000491060 NHP2Q9NX24 153 aaKnown RBP7.49□□□□□ -1.21
TRAIP-211ENST00000491060 IGLV5-48A0A075B6I7 105 aa7.48□□□□□ -1.21
TRAIP-211ENST00000491060 F8WEM9 126 aa7.48□□□□□ -1.21
TRAIP-211ENST00000491060 Q6ZQY7 126 aa7.48□□□□□ -1.21
TRAIP-211ENST00000491060 PAM16Q9Y3D7 125 aa7.48□□□□□ -1.21
TRAIP-211ENST00000491060 LINC00575Q6W349 94 aa7.47□□□□□ -1.21
TRAIP-211ENST00000491060 hADV29S1A0JD25 119 aa7.46□□□□□ -1.22
TRAIP-211ENST00000491060 COX8AP10176 69 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms