RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	S100A12	P80511	92 aa		10.98	□□□□□ -0.65
C4A-256	ENST00000490663	KRTAP13-2	Q52LG2	175 aa		10.98	□□□□□ -0.65
C4A-256	ENST00000490663	MUSTN1	Q8IVN3	82 aa		10.97	□□□□□ -0.65
C4A-256	ENST00000490663	SMCR5	Q8TEV8	140 aa		10.97	□□□□□ -0.65
C4A-256	ENST00000490663	HMCN2	Q8NDA2	5059 aa		10.97	□□□□□ -0.65
C4A-256	ENST00000490663	RPL13A	P40429	203 aa	Known RBP	10.96	□□□□□ -0.65
C4A-256	ENST00000490663	ERC2-IT1	O76042	136 aa		10.95	□□□□□ -0.66
C4A-256	ENST00000490663	CRYGA	P11844	174 aa		10.95	□□□□□ -0.66
C4A-256	ENST00000490663		Q9BRP9	147 aa		10.95	□□□□□ -0.66
C4A-256	ENST00000490663	SPRR4	Q96PI1	79 aa		10.94	□□□□□ -0.66
C4A-256	ENST00000490663	PPDPF	Q9H3Y8	114 aa		10.94	□□□□□ -0.66
C4A-256	ENST00000490663	ZNF73	O43830	326 aa	Predicted RBP	10.93	□□□□□ -0.66
C4A-256	ENST00000490663		Q6ZRX8	168 aa		10.93	□□□□□ -0.66
C4A-256	ENST00000490663	C3orf22	Q8N5N4	141 aa		10.93	□□□□□ -0.66
C4A-256	ENST00000490663	TYMSOS	Q8TAI1	123 aa		10.93	□□□□□ -0.66
C4A-256	ENST00000490663	PAM16	Q9Y3D7	125 aa		10.93	□□□□□ -0.66
C4A-256	ENST00000490663	IFITM1	P13164	125 aa		10.92	□□□□□ -0.66
C4A-256	ENST00000490663	FAM229B	Q4G0N7	80 aa		10.9	□□□□□ -0.66
C4A-256	ENST00000490663	SPATA45	Q537H7	98 aa		10.9	□□□□□ -0.66
C4A-256	ENST00000490663	TSPAN13	O95857	204 aa		10.89	□□□□□ -0.67
C4A-256	ENST00000490663	COX8A	P10176	69 aa		10.89	□□□□□ -0.67
C4A-256	ENST00000490663		Q6ZVH6	145 aa		10.89	□□□□□ -0.67
C4A-256	ENST00000490663	LINC00518	Q8N0U6	118 aa		10.89	□□□□□ -0.67
C4A-256	ENST00000490663	C14orf144	Q96I85	54 aa		10.89	□□□□□ -0.67
C4A-256	ENST00000490663	JOSD1	Q15040	202 aa	Predicted RBP	10.88	□□□□□ -0.67
C4A-256	ENST00000490663	COPS9	Q8WXC6	57 aa		10.88	□□□□□ -0.67
C4A-256	ENST00000490663		A6NDN8	102 aa		10.87	□□□□□ -0.67
C4A-256	ENST00000490663	GAGE2A	Q6NT46	116 aa		10.87	□□□□□ -0.67
C4A-256	ENST00000490663	VAMP8	Q9BV40	100 aa		10.87	□□□□□ -0.67
C4A-256	ENST00000490663	ZNF706	Q9Y5V0	76 aa	Predicted RBP	10.87	□□□□□ -0.67
C4A-256	ENST00000490663	C6orf99	Q4VX62	202 aa		10.86	□□□□□ -0.67
C4A-256	ENST00000490663	ST20-AS1	Q8NBB2	130 aa		10.85	□□□□□ -0.67
C4A-256	ENST00000490663		A4D1N5	150 aa		10.84	□□□□□ -0.67
C4A-256	ENST00000490663	C12orf57	Q99622	126 aa		10.84	□□□□□ -0.67
C4A-256	ENST00000490663	PYY3	Q5JQD4	70 aa		10.83	□□□□□ -0.68
C4A-256	ENST00000490663	HIST1H4G	Q99525	98 aa		10.83	□□□□□ -0.68
C4A-256	ENST00000490663	COX7B	P24311	80 aa		10.82	□□□□□ -0.68
C4A-256	ENST00000490663	HINT1	P49773	126 aa	Predicted RBP	10.82	□□□□□ -0.68
C4A-256	ENST00000490663	CBY1	Q9Y3M2	126 aa		10.82	□□□□□ -0.68
C4A-256	ENST00000490663	LINC00304	Q8N9R0	145 aa		10.81	□□□□□ -0.68
C4A-256	ENST00000490663	ELOF1	P60002	83 aa	Known RBP	10.8	□□□□□ -0.68
C4A-256	ENST00000490663	LINC00483	Q53H64	154 aa		10.8	□□□□□ -0.68
C4A-256	ENST00000490663	C2orf91	Q6ZV80	131 aa		10.8	□□□□□ -0.68
C4A-256	ENST00000490663	IGLV9-49	A0A0B4J1Y8	123 aa		10.79	□□□□□ -0.68
C4A-256	ENST00000490663	DLEU1	O43261	78 aa		10.79	□□□□□ -0.68
C4A-256	ENST00000490663	SMIM11B	Q8TCY0	68 aa		10.79	□□□□□ -0.68
C4A-256	ENST00000490663	TRAV13-2	A0A0B4J235	113 aa		10.78	□□□□□ -0.68
C4A-256	ENST00000490663	SLC25A34	Q6PIV7	304 aa		10.78	□□□□□ -0.68
C4A-256	ENST00000490663	MOBP	Q13875	183 aa		10.76	□□□□□ -0.69
C4A-256	ENST00000490663	PRR4	Q16378	134 aa		10.75	□□□□□ -0.69
C4A-256	ENST00000490663		Q8NBF4	154 aa		10.75	□□□□□ -0.69
C4A-256	ENST00000490663	RETNLB	Q9BQ08	111 aa		10.75	□□□□□ -0.69
C4A-256	ENST00000490663	LRP2	P98164	4655 aa		10.75	□□□□□ -0.69
C4A-256	ENST00000490663	DHRS4-AS1	Q9P1J3	65 aa		10.74	□□□□□ -0.69
C4A-256	ENST00000490663	HIGD1B	Q9P298	99 aa		10.73	□□□□□ -0.69
C4A-256	ENST00000490663	LPA	P08519	4548 aa		10.73	□□□□□ -0.69
C4A-256	ENST00000490663		A0A1B0GWB2	263 aa		10.72	□□□□□ -0.69
C4A-256	ENST00000490663	DEFB105A	Q8NG35	78 aa		10.72	□□□□□ -0.69
C4A-256	ENST00000490663	C9orf153	Q5TBE3	101 aa		10.71	□□□□□ -0.69
C4A-256	ENST00000490663	TRBV7-6	A0A0J9YX20	115 aa		10.7	□□□□□ -0.7
C4A-256	ENST00000490663		H7C2G1	150 aa		10.7	□□□□□ -0.7
C4A-256	ENST00000490663	CFC1B	P0CG36	223 aa		10.68	□□□□□ -0.7
C4A-256	ENST00000490663	CFC1	P0CG37	223 aa		10.68	□□□□□ -0.7
C4A-256	ENST00000490663	UBR4	Q5T4S7	5183 aa		10.68	□□□□□ -0.7
C4A-256	ENST00000490663		Q1RN00	199 aa		10.67	□□□□□ -0.7
C4A-256	ENST00000490663	TAL2	Q16559	108 aa		10.66	□□□□□ -0.7
C4A-256	ENST00000490663	SPRR1B	P22528	89 aa		10.65	□□□□□ -0.7
C4A-256	ENST00000490663	FXYD2	P54710	66 aa		10.65	□□□□□ -0.7
C4A-256	ENST00000490663	CEND1	Q8N111	149 aa		10.65	□□□□□ -0.7
C4A-256	ENST00000490663	LINC01547	P58512	204 aa	Predicted RBP	10.64	□□□□□ -0.71
C4A-256	ENST00000490663	C4orf48	Q5BLP8	95 aa		10.64	□□□□□ -0.71
C4A-256	ENST00000490663	RAB37	Q96AX2	223 aa		10.64	□□□□□ -0.71
C4A-256	ENST00000490663	VAMP3	Q15836	100 aa		10.61	□□□□□ -0.71
C4A-256	ENST00000490663	SPAG11A	Q6PDA7	123 aa		10.61	□□□□□ -0.71
C4A-256	ENST00000490663	LINC00575	Q6W349	94 aa		10.61	□□□□□ -0.71
C4A-256	ENST00000490663	SSBP3-AS1	Q7Z2R9	100 aa		10.61	□□□□□ -0.71
C4A-256	ENST00000490663		A0A0B4J2C4	111 aa		10.6	□□□□□ -0.71
C4A-256	ENST00000490663	TEX49	A0A1B0GTD5	131 aa		10.6	□□□□□ -0.71
C4A-256	ENST00000490663	LAMTOR3	Q9UHA4	124 aa		10.6	□□□□□ -0.71
C4A-256	ENST00000490663	HRCT1	Q6UXD1	115 aa		10.59	□□□□□ -0.71
C4A-256	ENST00000490663	SMIM29	Q86T20	159 aa		10.59	□□□□□ -0.71
C4A-256	ENST00000490663	NHP2	Q9NX24	153 aa	Known RBP	10.59	□□□□□ -0.71
C4A-256	ENST00000490663	IGLV5-48	A0A075B6I7	105 aa		10.58	□□□□□ -0.72
C4A-256	ENST00000490663	SLC25A20	O43772	301 aa		10.58	□□□□□ -0.72
C4A-256	ENST00000490663		Q8N377	158 aa		10.58	□□□□□ -0.72
C4A-256	ENST00000490663	PRO1933	Q9H354	126 aa		10.58	□□□□□ -0.72
C4A-256	ENST00000490663		A0A0G2JQZ4	141 aa		10.57	□□□□□ -0.72
C4A-256	ENST00000490663	HSD52	Q0P140	79 aa		10.57	□□□□□ -0.72
C4A-256	ENST00000490663		Q6ZQY7	126 aa		10.57	□□□□□ -0.72
C4A-256	ENST00000490663	UQCR10	Q9UDW1	63 aa		10.57	□□□□□ -0.72
C4A-256	ENST00000490663	hADV29S1	A0JD25	119 aa		10.56	□□□□□ -0.72
C4A-256	ENST00000490663		K7ERJ3	54 aa		10.56	□□□□□ -0.72
C4A-256	ENST00000490663	SPINK1	P00995	79 aa		10.56	□□□□□ -0.72
C4A-256	ENST00000490663	TMEM238L	A0A1B0GVL6	79 aa		10.55	□□□□□ -0.72
C4A-256	ENST00000490663		A6NJY4	79 aa		10.55	□□□□□ -0.72
C4A-256	ENST00000490663	BVES-AS1	Q5T3Y7	98 aa		10.54	□□□□□ -0.72
C4A-256	ENST00000490663	PRO1854	Q9UHT4	67 aa		10.53	□□□□□ -0.72
C4A-256	ENST00000490663	IGLV7-46	A0A075B6I9	117 aa		10.52	□□□□□ -0.73
C4A-256	ENST00000490663	FAM218A	Q96MZ4	157 aa		10.52	□□□□□ -0.73
C4A-256	ENST00000490663	CTAG1A	P78358	180 aa		10.5	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms