RNA–Protein interactions for RNA: ENST00000490431.2

GTF2I-210, Transcript of general transcription factor IIi, humanhuman

TSL 3

Gene GTF2I, Length 252 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-210ENST00000490431 SMCR5Q8TEV8 140 aa0.88□□□□□ -2.27
GTF2I-210ENST00000490431 PLEKHB2Q96CS7 222 aa0.88□□□□□ -2.27
GTF2I-210ENST00000490431 SCGB3A1Q96QR1 104 aa0.88□□□□□ -2.27
GTF2I-210ENST00000490431 C20orf78Q9BR46 151 aa0.88□□□□□ -2.27
GTF2I-210ENST00000490431 IMUPQ9GZP8 106 aa0.88□□□□□ -2.27
GTF2I-210ENST00000490431 MAP1LC3AQ9H492 121 aa0.88□□□□□ -2.27
GTF2I-210ENST00000490431 SMCO4Q9NRQ5 59 aa0.88□□□□□ -2.27
GTF2I-210ENST00000490431 NAT8BQ9UHF3 227 aa0.88□□□□□ -2.27
GTF2I-210ENST00000490431 PKD1P98161 4303 aa0.88□□□□□ -2.27
GTF2I-210ENST00000490431 SACSQ9NZJ4 4579 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 FCGBPQ9Y6R7 5405 aaPredicted RBP0.87□□□□□ -2.27
GTF2I-210ENST00000490431 VPS13BQ7Z7G8 4022 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 TRBV6-5A0A0K0K1A5 114 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 A8MUU9 505 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 HIGD1CA8MV81 97 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 TMEM250H0YL14 139 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 ARPC5O15511 151 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 RAB4AP20338 218 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 RPS29P62273 56 aaKnown RBP0.87□□□□□ -2.27
GTF2I-210ENST00000490431 RPL23P62829 140 aaKnown RBP0.87□□□□□ -2.27
GTF2I-210ENST00000490431 MRPS36P82909 103 aaKnown RBP0.87□□□□□ -2.27
GTF2I-210ENST00000490431 PDZD11Q5EBL8 140 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 TMEM170BQ5T4T1 132 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 ALKAL2Q6UX46 152 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 TMEM136Q6ZRR5 245 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 FA2HQ7L5A8 372 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 AMN1Q8IY45 258 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 TCTE3Q8IZS6 198 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 ORMDL3Q8N138 153 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 C3orf22Q8N5N4 141 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 DEFB105AQ8NG35 78 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 ZNF625Q96I27 306 aaPredicted RBP0.87□□□□□ -2.27
GTF2I-210ENST00000490431 PRELID3AQ96N28 172 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 SPRR4Q96PI1 79 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 SMIM2Q9BVW6 85 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 RNASE7Q9H1E1 156 aaKnown RBP0.87□□□□□ -2.27
GTF2I-210ENST00000490431 PRO1933Q9H354 126 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 DNAH6Q9C0G6 4158 aa0.87□□□□□ -2.27
GTF2I-210ENST00000490431 MYCBP2O75592 4640 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 HSPG2P98160 4391 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 IGHV3OR16-9A0A0B4J2B5 98 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 ZNF815PA8K554 130 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 TMEM238C9JI98 176 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 D6R8Y8 96 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 SMKR1H3BMG3 65 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 K7EMI3 77 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 SPINK8P0C7L1 97 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 IGLC6P0CF74 106 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 POLR2KP53803 58 aaKnown RBP0.86□□□□□ -2.27
GTF2I-210ENST00000490431 RPL39P62891 51 aaKnown RBP0.86□□□□□ -2.27
GTF2I-210ENST00000490431 ADIRFQ15847 76 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 COA6Q5JTJ3 125 aaKnown RBP0.86□□□□□ -2.27
GTF2I-210ENST00000490431 MRPL54Q6P161 138 aaKnown RBP0.86□□□□□ -2.27
GTF2I-210ENST00000490431 LINC00299Q6ZSB3 139 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 BOD1L2Q8IYS8 172 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 SLC7A5P1Q8MH63 180 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 COPS9Q8WXC6 57 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 Q96NJ1 140 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 SMIM7Q9BQ49 75 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 NHP2Q9NX24 153 aaKnown RBP0.86□□□□□ -2.27
GTF2I-210ENST00000490431 ERG28Q9UKR5 140 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 LAMTOR2Q9Y2Q5 125 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 V9GYH0 126 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 DNAH10Q8IVF4 4471 aa0.86□□□□□ -2.27
GTF2I-210ENST00000490431 PLECQ15149 4684 aaKnown RBP0.86□□□□□ -2.27
GTF2I-210ENST00000490431 APOBP04114 4563 aaKnown RBP0.86□□□□□ -2.27
GTF2I-210ENST00000490431 FAT2Q9NYQ8 4349 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 MYMXA0A1B0GTQ4 84 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 TINCRA0A1B0GVN0 87 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 NCR3O14931 201 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 PLA2G10O15496 165 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 P0C880 135 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 S100PP25815 95 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 DDTP30046 118 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 H2BFSP57053 126 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 IFITM2Q01629 132 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 IL15RAQ13261 267 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 PEA15Q15121 130 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 RHEBQ15382 184 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 VAMP3Q15836 100 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 MRPL51Q4U2R6 128 aaKnown RBP0.85□□□□□ -2.27
GTF2I-210ENST00000490431 Q5BKY6 102 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 FAM104BQ5XKR9 115 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 MBD3L1Q8WWY6 194 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 C20orf166-AS1Q96NR2 134 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 DSCR8Q96T75 97 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 Q9BRP9 147 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 SNHG12Q9BXW3 62 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 SND1-IT1Q9HBX3 110 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 CDKN2A-AS1Q9UH64 79 aa0.85□□□□□ -2.27
GTF2I-210ENST00000490431 SYNE2Q8WXH0 6885 aaKnown RBP0.84□□□□□ -2.27
GTF2I-210ENST00000490431 TRBV24-1A0A075B6N3 115 aa0.84□□□□□ -2.27
GTF2I-210ENST00000490431 TRAV23DV6A0A075B6W5 121 aa0.84□□□□□ -2.27
GTF2I-210ENST00000490431 TEX49A0A1B0GTD5 131 aa0.84□□□□□ -2.27
GTF2I-210ENST00000490431 FAM236AA0A1B0GUQ0 79 aa0.84□□□□□ -2.27
GTF2I-210ENST00000490431 FAM236BA0A1B0GV22 79 aa0.84□□□□□ -2.27
GTF2I-210ENST00000490431 C9JQL5 133 aa0.84□□□□□ -2.27
GTF2I-210ENST00000490431 LST1O00453 97 aa0.84□□□□□ -2.27
GTF2I-210ENST00000490431 MT-ND4LP03901 98 aa0.84□□□□□ -2.27
GTF2I-210ENST00000490431 RPL37P61927 97 aaKnown RBP0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms