RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 SND1-IT1Q9HBX3 110 aa2.9□□□□□ -1.95
RBM39-235ENST00000490354 HYDINQ4G0P3 5121 aa2.9□□□□□ -1.95
RBM39-235ENST00000490354 A0A0B4J2C4 111 aa2.89□□□□□ -1.95
RBM39-235ENST00000490354 LCE6AA0A183 80 aa2.89□□□□□ -1.95
RBM39-235ENST00000490354 NDUFC2O95298 119 aa2.89□□□□□ -1.95
RBM39-235ENST00000490354 GTF2H5Q6ZYL4 71 aa2.89□□□□□ -1.95
RBM39-235ENST00000490354 Q8N814 137 aa2.89□□□□□ -1.95
RBM39-235ENST00000490354 NHP2Q9NX24 153 aaKnown RBP2.89□□□□□ -1.95
RBM39-235ENST00000490354 DNAH5Q8TE73 4624 aa2.89□□□□□ -1.95
RBM39-235ENST00000490354 DNAH8Q96JB1 4490 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 GAGE10A6NGK3 116 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 RTL8CO15255 209 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 SCGB1A1P11684 91 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 NPC2P61916 151 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 Q6ZRP5 223 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 C9orf163Q8N9P6 203 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 VPS25Q9BRG1 176 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 PRO1854Q9UHT4 67 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 PKIGQ9Y2B9 76 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 RYR2Q92736 4967 aa2.88□□□□□ -1.95
RBM39-235ENST00000490354 IGKV2-28A0A075B6P5 120 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 TRAV13-2A0A0B4J235 113 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 TRBV10-2A0A0K0K1G8 114 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 LOC107984640A0A0U1RRK4 108 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 C16orf90A8MZG2 172 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 K7EP34 96 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 K7ERJ3 54 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 IGKV2D-28P01615 120 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 GAGE2EQ4V326 116 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 SDIM1Q6ZPB5 146 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 RAB37Q96AX2 223 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 XAGE1AQ9HD64 81 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 GAGE2DQ9UEU5 116 aa2.87□□□□□ -1.95
RBM39-235ENST00000490354 LRP1BQ9NZR2 4599 aa2.86□□□□□ -1.95
RBM39-235ENST00000490354 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.86□□□□□ -1.95
RBM39-235ENST00000490354 RPL18AQ02543 176 aaKnown RBP2.86□□□□□ -1.95
RBM39-235ENST00000490354 GAGE2BQ13066 116 aa2.86□□□□□ -1.95
RBM39-235ENST00000490354 C9orf129Q5T035 196 aaKnown RBP2.86□□□□□ -1.95
RBM39-235ENST00000490354 LINC00337Q8N6G1 96 aa2.86□□□□□ -1.95
RBM39-235ENST00000490354 Q8NDZ9 215 aa2.86□□□□□ -1.95
RBM39-235ENST00000490354 LINC00474Q9P2X8 69 aa2.86□□□□□ -1.95
RBM39-235ENST00000490354 DYNC1H1Q14204 4646 aaKnown RBP2.85□□□□□ -1.95
RBM39-235ENST00000490354 A0A1W2PPM0 123 aa2.85□□□□□ -1.95
RBM39-235ENST00000490354 F8W1H4 67 aa2.85□□□□□ -1.95
RBM39-235ENST00000490354 M0R378 163 aa2.85□□□□□ -1.95
RBM39-235ENST00000490354 TSPAN13O95857 204 aa2.85□□□□□ -1.95
RBM39-235ENST00000490354 VPREB1P12018 145 aa2.85□□□□□ -1.95
RBM39-235ENST00000490354 PRR3P79522 188 aaKnown RBP2.85□□□□□ -1.95
RBM39-235ENST00000490354 LINC00336Q6ZUF6 198 aa2.85□□□□□ -1.95
RBM39-235ENST00000490354 TMEM126AQ9H061 195 aa2.85□□□□□ -1.95
RBM39-235ENST00000490354 RYR3Q15413 4870 aa2.85□□□□□ -1.95
RBM39-235ENST00000490354 PKD1P98161 4303 aa2.85□□□□□ -1.95
RBM39-235ENST00000490354 A0A087X002 238 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 A0A096LNI7 61 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 H3BUT2 72 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 IGLV6-57P01721 117 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 COX6CP09669 75 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 FABP2P12104 132 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 RPL13AP40429 203 aaKnown RBP2.84□□□□□ -1.95
RBM39-235ENST00000490354 Q1RN00 199 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 SERTAD4-AS1Q5TG53 156 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 OR13C6PQ8NH95 151 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 C22orf24Q9Y442 160 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 SPCS1Q9Y6A9 102 aa2.84□□□□□ -1.95
RBM39-235ENST00000490354 IGKV2-24A0A0C4DH68 120 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 TRBV10-3A0A0K0K1G6 114 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 A0A1W2PNN7 141 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 FAM168BA1KXE4 195 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 EPM2AB3EWF7 344 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 H7C2G1 150 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 J3QR89 54 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 NCR3O14931 201 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 SCGB1C2P0DMR2 95 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 RPL28P46779 137 aaKnown RBP2.83□□□□□ -1.96
RBM39-235ENST00000490354 S100A7L2Q5SY68 101 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 NKAPP1Q8N9T2 125 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 SMIM11BQ8TCY0 68 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 KCNQ1DNQ9H478 68 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 HECTD4Q9Y4D8 3996 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 FRAS1Q86XX4 4008 aa2.83□□□□□ -1.96
RBM39-235ENST00000490354 IGLV1-50A0A075B6I6 118 aa2.82□□□□□ -1.96
RBM39-235ENST00000490354 TRBV20-1A0A075B6N2 111 aa2.82□□□□□ -1.96
RBM39-235ENST00000490354 H0YGX0 51 aa2.82□□□□□ -1.96
RBM39-235ENST00000490354 PANO1I0J062 215 aa2.82□□□□□ -1.96
RBM39-235ENST00000490354 PSMB2P49721 201 aa2.82□□□□□ -1.96
RBM39-235ENST00000490354 LINC01620Q4KN68 170 aa2.82□□□□□ -1.96
RBM39-235ENST00000490354 MRPL55Q7Z7F7 128 aaKnown RBP2.82□□□□□ -1.96
RBM39-235ENST00000490354 SPACA4Q8TDM5 124 aa2.82□□□□□ -1.96
RBM39-235ENST00000490354 C7orf33Q8WU49 177 aa2.82□□□□□ -1.96
RBM39-235ENST00000490354 DPH3Q96FX2 82 aa2.82□□□□□ -1.96
RBM39-235ENST00000490354 SIGMAR1Q99720 223 aa2.82□□□□□ -1.96
RBM39-235ENST00000490354 NAA38Q9BRA0 125 aaKnown RBP2.82□□□□□ -1.96
RBM39-235ENST00000490354 TRAV23DV6A0A075B6W5 121 aa2.81□□□□□ -1.96
RBM39-235ENST00000490354 TRBV7-6A0A0J9YX20 115 aa2.81□□□□□ -1.96
RBM39-235ENST00000490354 ZNF73O43830 326 aaPredicted RBP2.81□□□□□ -1.96
RBM39-235ENST00000490354 CHTF8P0CG12 524 aa2.81□□□□□ -1.96
RBM39-235ENST00000490354 FUSP35637 526 aaKnown RBP eCLIP2.81□□□□□ -1.96
RBM39-235ENST00000490354 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms