RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 HCG22E2RYF7 251 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 IGLV6-57P01721 117 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 DIRC1Q969H9 104 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 CELA1Q9UNI1 258 aa3.21□□□□□ -1.9
SNRNP40-206ENST00000489853 HIVEP1P15822 2718 aa3.2□□□□□ -1.9
SNRNP40-206ENST00000489853 A0A1B0GW54 56 aa3.2□□□□□ -1.9
SNRNP40-206ENST00000489853 C19orf84I3L1E1 186 aa3.2□□□□□ -1.9
SNRNP40-206ENST00000489853 HIGD2BQ4VC39 106 aa3.2□□□□□ -1.9
SNRNP40-206ENST00000489853 C7orf65Q6ZTY9 151 aa3.2□□□□□ -1.9
SNRNP40-206ENST00000489853 LCA10Q71F78 164 aa3.2□□□□□ -1.9
SNRNP40-206ENST00000489853 Q8N9P0 234 aaPredicted RBP3.2□□□□□ -1.9
SNRNP40-206ENST00000489853 TACC2O95359 2948 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 IGHV4-61A0A0C4DH41 118 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 IGHV4-59P01825 116 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 KIAA0087Q14695 138 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 LY6EQ16553 131 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 LINC00612Q8N6U2 182 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 SPTSSBQ8NFR3 76 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 TRGV4A0A0C4DH28 118 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 C8orf87E5RJ46 101 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 IGHV4-30-4P0DP06 118 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 FBXL19-AS1Q494R0 122 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 Q75L30 129 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 SMIM29Q86T20 159 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 Q8NDZ9 215 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 B9D2Q9BPU9 175 aa3.19□□□□□ -1.9
SNRNP40-206ENST00000489853 MTORP42345 2549 aa3.18□□□□□ -1.9
SNRNP40-206ENST00000489853 A0A1B0GUV1 79 aa3.18□□□□□ -1.9
SNRNP40-206ENST00000489853 LOC101927531A0A1B0GV80 90 aa3.18□□□□□ -1.9
SNRNP40-206ENST00000489853 H3BUX3 64 aa3.18□□□□□ -1.9
SNRNP40-206ENST00000489853 DCHS2Q6V1P9 2916 aa3.18□□□□□ -1.9
SNRNP40-206ENST00000489853 AKAP6Q13023 2319 aa3.17□□□□□ -1.9
SNRNP40-206ENST00000489853 C10orf25Q5T742 122 aa3.17□□□□□ -1.9
SNRNP40-206ENST00000489853 SPANXA2-OT1Q8N9U9 137 aa3.17□□□□□ -1.9
SNRNP40-206ENST00000489853 Q9BRP9 147 aa3.17□□□□□ -1.9
SNRNP40-206ENST00000489853 PRR15LQ9BU68 103 aa3.17□□□□□ -1.9
SNRNP40-206ENST00000489853 CDC42SE1Q9NRR8 79 aa3.17□□□□□ -1.9
SNRNP40-206ENST00000489853 C2CD3Q4AC94 2353 aa3.17□□□□□ -1.9
SNRNP40-206ENST00000489853 FBN3Q75N90 2809 aa3.17□□□□□ -1.9
SNRNP40-206ENST00000489853 AKAP9Q99996 3911 aa3.17□□□□□ -1.9
SNRNP40-206ENST00000489853 BRD3OSQ6XYD6 125 aa3.17□□□□□ -1.9
SNRNP40-206ENST00000489853 ZNF469Q96JG9 3925 aaPredicted RBP3.16□□□□□ -1.9
SNRNP40-206ENST00000489853 NIPBLQ6KC79 2804 aaeCLIP3.16□□□□□ -1.9
SNRNP40-206ENST00000489853 LOC100131303A0A0U1RQF7 123 aa3.16□□□□□ -1.9
SNRNP40-206ENST00000489853 A6NED7 52 aa3.16□□□□□ -1.9
SNRNP40-206ENST00000489853 PRR4Q16378 134 aa3.16□□□□□ -1.9
SNRNP40-206ENST00000489853 C9orf116Q5BN46 136 aaPredicted RBP3.16□□□□□ -1.9
SNRNP40-206ENST00000489853 LINC00208Q96KT6 92 aa3.16□□□□□ -1.9
SNRNP40-206ENST00000489853 KLK12Q9UKR0 248 aa3.16□□□□□ -1.9
SNRNP40-206ENST00000489853 F8P00451 2351 aa3.16□□□□□ -1.9
SNRNP40-206ENST00000489853 MP68P56378 58 aa3.15□□□□□ -1.9
SNRNP40-206ENST00000489853 SEC61BP60468 96 aaKnown RBP3.15□□□□□ -1.9
SNRNP40-206ENST00000489853 NOP10Q9NPE3 64 aaKnown RBP3.15□□□□□ -1.9
SNRNP40-206ENST00000489853 HIVEP3Q5T1R4 2406 aa3.15□□□□□ -1.9
SNRNP40-206ENST00000489853 DNHD1Q96M86 4753 aa3.15□□□□□ -1.91
SNRNP40-206ENST00000489853 A0A0J9YWU9 116 aa3.15□□□□□ -1.91
SNRNP40-206ENST00000489853 H3BPC8 53 aa3.15□□□□□ -1.91
SNRNP40-206ENST00000489853 ST20-AS1Q8NBB2 130 aa3.15□□□□□ -1.91
SNRNP40-206ENST00000489853 KCNQ1DNQ9H478 68 aa3.15□□□□□ -1.91
SNRNP40-206ENST00000489853 C3orf84H3BNL1 204 aa3.14□□□□□ -1.91
SNRNP40-206ENST00000489853 MOBPQ13875 183 aa3.14□□□□□ -1.91
SNRNP40-206ENST00000489853 NKAPP1Q8N9T2 125 aa3.14□□□□□ -1.91
SNRNP40-206ENST00000489853 ANKHD1Q8IWZ3 2542 aaKnown RBP3.14□□□□□ -1.91
SNRNP40-206ENST00000489853 IGLV5-48A0A075B6I7 105 aa3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 GVQW2A0A096LPI5 108 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 INAFM1C9JVW0 142 aa3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 C10orf99Q6UWK7 81 aa3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 UNQ6190/PRO20217Q6UXQ8 127 aa3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 CHCHD10Q8WYQ3 142 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 C16orf74Q96GX8 76 aa3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 CR1P17927 2039 aa3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 MAP1AP78559 2803 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 DSCR10P59022 87 aa3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 KPRPQ5T749 579 aaPredicted RBP3.13□□□□□ -1.91
SNRNP40-206ENST00000489853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.12□□□□□ -1.917e-8■■■□□ 17.3
SNRNP40-206ENST00000489853 WNK1Q9H4A3 2382 aa3.12□□□□□ -1.91
SNRNP40-206ENST00000489853 PRB2P02812 416 aaPredicted RBP3.12□□□□□ -1.91
SNRNP40-206ENST00000489853 WFDC10AQ9H1F0 79 aa3.12□□□□□ -1.91
SNRNP40-206ENST00000489853 CCDC168Q8NDH2 2452 aa3.12□□□□□ -1.91
SNRNP40-206ENST00000489853 VPS13CQ709C8 3753 aa3.11□□□□□ -1.91
SNRNP40-206ENST00000489853 LINC01558Q9Y6Z2 57 aa3.11□□□□□ -1.91
SNRNP40-206ENST00000489853 A0A1W2PNM2 257 aa3.11□□□□□ -1.91
SNRNP40-206ENST00000489853 DSCR9P59020 149 aa3.11□□□□□ -1.91
SNRNP40-206ENST00000489853 SPAG11BQ08648 103 aa3.11□□□□□ -1.91
SNRNP40-206ENST00000489853 CLPSL2Q6UWE3 100 aa3.11□□□□□ -1.91
SNRNP40-206ENST00000489853 SPRR4Q96PI1 79 aa3.11□□□□□ -1.91
SNRNP40-206ENST00000489853 K7EQZ3 153 aa3.1□□□□□ -1.91
SNRNP40-206ENST00000489853 CMC4P56277 68 aaPredicted RBP3.1□□□□□ -1.91
SNRNP40-206ENST00000489853 Q8N1X5 172 aa3.1□□□□□ -1.91
SNRNP40-206ENST00000489853 Q8N377 158 aa3.1□□□□□ -1.91
SNRNP40-206ENST00000489853 PLAC8Q9NZF1 115 aa3.1□□□□□ -1.91
SNRNP40-206ENST00000489853 SPG11Q96JI7 2443 aa3.1□□□□□ -1.91
SNRNP40-206ENST00000489853 A0A087X002 238 aa3.09□□□□□ -1.91
SNRNP40-206ENST00000489853 REG3AQ06141 175 aa3.09□□□□□ -1.91
SNRNP40-206ENST00000489853 ASB16-AS1Q495Z4 193 aa3.09□□□□□ -1.91
SNRNP40-206ENST00000489853 LINC01554Q52M75 96 aa3.09□□□□□ -1.91
SNRNP40-206ENST00000489853 Q8NBF4 154 aa3.09□□□□□ -1.91
SNRNP40-206ENST00000489853 IGLV7-46A0A075B6I9 117 aa3.09□□□□□ -1.92
SNRNP40-206ENST00000489853 GIG44P09565 113 aaPredicted RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms