RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 SPANXN1Q5VSR9 72 aa3.93□□□□□ -1.78
CNOT9-207ENST00000489687 Q6ZRN7 208 aaPredicted RBP3.93□□□□□ -1.78
CNOT9-207ENST00000489687 FAM19A3Q7Z5A8 133 aa3.93□□□□□ -1.78
CNOT9-207ENST00000489687 WFDC10BQ8IUB3 73 aa3.93□□□□□ -1.78
CNOT9-207ENST00000489687 LINC00167Q96N53 147 aa3.93□□□□□ -1.78
CNOT9-207ENST00000489687 TRGV4A0A0C4DH28 118 aa3.92□□□□□ -1.78
CNOT9-207ENST00000489687 LINC00467Q9BRT7 94 aa3.92□□□□□ -1.78
CNOT9-207ENST00000489687 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
CNOT9-207ENST00000489687 C11orf21Q9P2W6 132 aa3.92□□□□□ -1.78
CNOT9-207ENST00000489687 NDUFA12Q9UI09 145 aa3.92□□□□□ -1.78
CNOT9-207ENST00000489687 IGHV3-73A0A0B4J1V6 119 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 H3BNG1 76 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 H3BQ85 93 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 K7EQD1 137 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 GNRH2O43555 120 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 CDK2AP2O75956 126 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 DGAT2L7PQ6IED9 249 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 C20orf197Q8N268 126 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 C20orf203Q8NBC4 194 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 BRK1Q8WUW1 75 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 PRO0255Q9UI72 69 aa3.91□□□□□ -1.78
CNOT9-207ENST00000489687 TRAV21A0A0B4J279 112 aa3.9□□□□□ -1.79
CNOT9-207ENST00000489687 IGLV5-39A0A0G2JS06 123 aa3.9□□□□□ -1.79
CNOT9-207ENST00000489687 H7C2G1 150 aa3.9□□□□□ -1.79
CNOT9-207ENST00000489687 ADAMTSL4-AS1Q5T5F5 129 aa3.9□□□□□ -1.79
CNOT9-207ENST00000489687 SUMO4Q6EEV6 95 aa3.9□□□□□ -1.79
CNOT9-207ENST00000489687 CD164L2Q6UWJ8 174 aa3.9□□□□□ -1.79
CNOT9-207ENST00000489687 LINC00308Q8TCZ7 52 aa3.9□□□□□ -1.79
CNOT9-207ENST00000489687 HMCN2Q8NDA2 5059 aa3.9□□□□□ -1.79
CNOT9-207ENST00000489687 TRBV7-4A0A0J9YYF1 115 aa3.89□□□□□ -1.79
CNOT9-207ENST00000489687 PDE6GP18545 87 aa3.89□□□□□ -1.79
CNOT9-207ENST00000489687 KRTAP10-1P60331 282 aa3.89□□□□□ -1.79
CNOT9-207ENST00000489687 CXCL6P80162 114 aa3.89□□□□□ -1.79
CNOT9-207ENST00000489687 PIK3CD-AS1Q5SR53 167 aa3.89□□□□□ -1.79
CNOT9-207ENST00000489687 Q8N1X5 172 aa3.89□□□□□ -1.79
CNOT9-207ENST00000489687 Q9HAA7 133 aa3.89□□□□□ -1.79
CNOT9-207ENST00000489687 IGLV4-3A0A075B6K6 122 aa3.88□□□□□ -1.79
CNOT9-207ENST00000489687 A0A087WTM6 91 aa3.88□□□□□ -1.79
CNOT9-207ENST00000489687 NDUFS5O43920 106 aa3.88□□□□□ -1.79
CNOT9-207ENST00000489687 MRPL55Q7Z7F7 128 aaKnown RBP3.88□□□□□ -1.79
CNOT9-207ENST00000489687 RPL39LQ96EH5 51 aaKnown RBP3.88□□□□□ -1.79
CNOT9-207ENST00000489687 LOC110117498A0A087WWA1 95 aa3.87□□□□□ -1.79
CNOT9-207ENST00000489687 IGKV3D-7A0A0C4DH55 119 aa3.87□□□□□ -1.79
CNOT9-207ENST00000489687 LECT2O14960 151 aa3.87□□□□□ -1.79
CNOT9-207ENST00000489687 SMR3BP02814 79 aaPredicted RBP3.87□□□□□ -1.79
CNOT9-207ENST00000489687 RBM3P98179 157 aaKnown RBP3.87□□□□□ -1.79
CNOT9-207ENST00000489687 PHF5AQ7RTV0 110 aaKnown RBP3.87□□□□□ -1.79
CNOT9-207ENST00000489687 UBL5Q9BZL1 73 aa3.87□□□□□ -1.79
CNOT9-207ENST00000489687 Q9UF83 564 aa3.87□□□□□ -1.79
CNOT9-207ENST00000489687 FAT3Q8TDW7 4589 aa3.87□□□□□ -1.79
CNOT9-207ENST00000489687 A0A087WVE0 104 aa3.86□□□□□ -1.79
CNOT9-207ENST00000489687 RNASE3P12724 160 aaKnown RBP3.86□□□□□ -1.79
CNOT9-207ENST00000489687 Q5VSD8 79 aa3.86□□□□□ -1.79
CNOT9-207ENST00000489687 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
CNOT9-207ENST00000489687 FAM104AQ969W3 186 aa3.86□□□□□ -1.79
CNOT9-207ENST00000489687 ZNF625Q96I27 306 aaPredicted RBP3.86□□□□□ -1.79
CNOT9-207ENST00000489687 PHLDA3Q9Y5J5 127 aa3.86□□□□□ -1.79
CNOT9-207ENST00000489687 LRP1Q07954 4544 aaKnown RBP3.85□□□□□ -1.79
CNOT9-207ENST00000489687 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
CNOT9-207ENST00000489687 IGHV3-38A0A0C4DH36 116 aa3.85□□□□□ -1.79
CNOT9-207ENST00000489687 A0A0J9YXV3 536 aa3.85□□□□□ -1.79
CNOT9-207ENST00000489687 F8WEM9 126 aa3.85□□□□□ -1.79
CNOT9-207ENST00000489687 M0QY20 66 aa3.85□□□□□ -1.79
CNOT9-207ENST00000489687 PSCAO43653 123 aa3.85□□□□□ -1.79
CNOT9-207ENST00000489687 FAM218AQ96MZ4 157 aa3.85□□□□□ -1.79
CNOT9-207ENST00000489687 PKHD1L1Q86WI1 4243 aa3.84□□□□□ -1.79
CNOT9-207ENST00000489687 A0A087X002 238 aa3.84□□□□□ -1.79
CNOT9-207ENST00000489687 IGLV5-52A0A0A0MRZ9 124 aa3.84□□□□□ -1.79
CNOT9-207ENST00000489687 TMEM256-PLSCR3K7ERE1 68 aa3.84□□□□□ -1.79
CNOT9-207ENST00000489687 RPL39P62891 51 aaKnown RBP3.84□□□□□ -1.79
CNOT9-207ENST00000489687 SS18Q15532 418 aa3.84□□□□□ -1.79
CNOT9-207ENST00000489687 LINC01556Q5JQF7 62 aa3.84□□□□□ -1.79
CNOT9-207ENST00000489687 FAM74A4Q5TZK3 123 aa3.84□□□□□ -1.79
CNOT9-207ENST00000489687 KRTAP3-1Q9BYR8 98 aa3.84□□□□□ -1.79
CNOT9-207ENST00000489687 LINC00474Q9P2X8 69 aa3.84□□□□□ -1.79
CNOT9-207ENST00000489687 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.83□□□□□ -1.8
CNOT9-207ENST00000489687 hDV103S1A0JD37 113 aa3.83□□□□□ -1.8
CNOT9-207ENST00000489687 LRCOL1A6NCL2 159 aa3.83□□□□□ -1.8
CNOT9-207ENST00000489687 S100A4P26447 101 aaKnown RBP3.83□□□□□ -1.8
CNOT9-207ENST00000489687 CYP4F30PQ9H0H9 118 aa3.83□□□□□ -1.8
CNOT9-207ENST00000489687 C14orf132Q9NPU4 83 aa3.83□□□□□ -1.8
CNOT9-207ENST00000489687 ORMDL1Q9P0S3 153 aa3.83□□□□□ -1.8
CNOT9-207ENST00000489687 TRAV23DV6A0A075B6W5 121 aa3.82□□□□□ -1.8
CNOT9-207ENST00000489687 A0A087WZ39 114 aa3.82□□□□□ -1.8
CNOT9-207ENST00000489687 TRBV6-4A0A1B0GX49 114 aa3.82□□□□□ -1.8
CNOT9-207ENST00000489687 VPREB1P12018 145 aa3.82□□□□□ -1.8
CNOT9-207ENST00000489687 UBE2BP63146 152 aa3.82□□□□□ -1.8
CNOT9-207ENST00000489687 LELP1Q5T871 98 aa3.82□□□□□ -1.8
CNOT9-207ENST00000489687 ATP11AUNQ6ZP68 121 aa3.82□□□□□ -1.8
CNOT9-207ENST00000489687 Q8N814 137 aa3.82□□□□□ -1.8
CNOT9-207ENST00000489687 TMEM254Q8TBM7 123 aa3.82□□□□□ -1.8
CNOT9-207ENST00000489687 OPRPNQ99935 248 aaPredicted RBP3.82□□□□□ -1.8
CNOT9-207ENST00000489687 CRPP02741 224 aa3.81□□□□□ -1.8
CNOT9-207ENST00000489687 ENHOQ6UWT2 76 aa3.81□□□□□ -1.8
CNOT9-207ENST00000489687 SOSTDC1Q6X4U4 206 aa3.81□□□□□ -1.8
CNOT9-207ENST00000489687 Q6ZVQ6 151 aa3.81□□□□□ -1.8
CNOT9-207ENST00000489687 RBM12B-AS1Q9P1G2 102 aa3.81□□□□□ -1.8
CNOT9-207ENST00000489687 A0A1B0GW54 56 aa3.8□□□□□ -1.8
CNOT9-207ENST00000489687 M0R378 163 aa3.8□□□□□ -1.8
CNOT9-207ENST00000489687 MGPP08493 103 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms