RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
SCAMP4-208ENST00000489554 SNCGO76070 127 aa6.66□□□□□ -1.34
SCAMP4-208ENST00000489554 TCL1BO95988 128 aa6.66□□□□□ -1.34
SCAMP4-208ENST00000489554 LINC00474Q9P2X8 69 aa6.66□□□□□ -1.34
SCAMP4-208ENST00000489554 A0A096LNI7 61 aa6.65□□□□□ -1.34
SCAMP4-208ENST00000489554 IGKV2-24A0A0C4DH68 120 aa6.65□□□□□ -1.34
SCAMP4-208ENST00000489554 NDUFC2-KCTD14E9PQ53 114 aa6.65□□□□□ -1.34
SCAMP4-208ENST00000489554 TRIAP1O43715 76 aa6.65□□□□□ -1.34
SCAMP4-208ENST00000489554 OXTP01178 125 aa6.65□□□□□ -1.34
SCAMP4-208ENST00000489554 RPL28P46779 137 aaKnown RBP6.65□□□□□ -1.34
SCAMP4-208ENST00000489554 OCIAD2Q56VL3 154 aa6.65□□□□□ -1.34
SCAMP4-208ENST00000489554 SOSTDC1Q6X4U4 206 aa6.65□□□□□ -1.34
SCAMP4-208ENST00000489554 LOC107984640A0A0U1RRK4 108 aa6.64□□□□□ -1.35
SCAMP4-208ENST00000489554 C9orf129Q5T035 196 aaKnown RBP6.64□□□□□ -1.35
SCAMP4-208ENST00000489554 Q8NDZ9 215 aa6.64□□□□□ -1.35
SCAMP4-208ENST00000489554 C7orf33Q8WU49 177 aa6.64□□□□□ -1.35
SCAMP4-208ENST00000489554 TMEM126AQ9H061 195 aa6.64□□□□□ -1.35
SCAMP4-208ENST00000489554 H3BT86 120 aa6.63□□□□□ -1.35
SCAMP4-208ENST00000489554 KRTAP7-1Q8IUC3 87 aa6.63□□□□□ -1.35
SCAMP4-208ENST00000489554 LINC01600Q96MT4 127 aa6.63□□□□□ -1.35
SCAMP4-208ENST00000489554 TRBV10-2A0A0K0K1G8 114 aa6.62□□□□□ -1.35
SCAMP4-208ENST00000489554 LST1O00453 97 aa6.62□□□□□ -1.35
SCAMP4-208ENST00000489554 SLC25A20O43772 301 aa6.62□□□□□ -1.35
SCAMP4-208ENST00000489554 TRACP01848 142 aa6.62□□□□□ -1.35
SCAMP4-208ENST00000489554 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
SCAMP4-208ENST00000489554 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
SCAMP4-208ENST00000489554 XAGE1AQ9HD64 81 aa6.62□□□□□ -1.35
SCAMP4-208ENST00000489554 PRO0461Q9UI25 63 aa6.62□□□□□ -1.35
SCAMP4-208ENST00000489554 A0A1B0GX51 115 aa6.61□□□□□ -1.35
SCAMP4-208ENST00000489554 C9JAW5 83 aa6.61□□□□□ -1.35
SCAMP4-208ENST00000489554 GAGE2EQ4V326 116 aa6.61□□□□□ -1.35
SCAMP4-208ENST00000489554 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
SCAMP4-208ENST00000489554 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
SCAMP4-208ENST00000489554 GAGE2BQ13066 116 aa6.6□□□□□ -1.35
SCAMP4-208ENST00000489554 TEN1Q86WV5 123 aa6.6□□□□□ -1.35
SCAMP4-208ENST00000489554 ANKRD29Q8N6D5 301 aa6.6□□□□□ -1.35
SCAMP4-208ENST00000489554 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.35
SCAMP4-208ENST00000489554 FAM168BA1KXE4 195 aa6.59□□□□□ -1.35
SCAMP4-208ENST00000489554 DNAL4O96015 105 aa6.59□□□□□ -1.35
SCAMP4-208ENST00000489554 IGKV2D-28P01615 120 aa6.59□□□□□ -1.35
SCAMP4-208ENST00000489554 ETDBQ3ZM63 59 aa6.59□□□□□ -1.35
SCAMP4-208ENST00000489554 S100A7L2Q5SY68 101 aa6.59□□□□□ -1.35
SCAMP4-208ENST00000489554 SERTAD4-AS1Q5TG53 156 aa6.59□□□□□ -1.35
SCAMP4-208ENST00000489554 LINC00337Q8N6G1 96 aa6.59□□□□□ -1.35
SCAMP4-208ENST00000489554 PPDPFLQ8WWR9 84 aa6.59□□□□□ -1.35
SCAMP4-208ENST00000489554 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
SCAMP4-208ENST00000489554 A0A1W2PNN7 141 aa6.58□□□□□ -1.36
SCAMP4-208ENST00000489554 GHRHP01286 108 aa6.58□□□□□ -1.36
SCAMP4-208ENST00000489554 VPREB1P12018 145 aa6.58□□□□□ -1.36
SCAMP4-208ENST00000489554 PRR3P79522 188 aaKnown RBP6.58□□□□□ -1.36
SCAMP4-208ENST00000489554 FAT3Q8TDW7 4589 aa6.58□□□□□ -1.36
SCAMP4-208ENST00000489554 H3BQ85 93 aa6.57□□□□□ -1.36
SCAMP4-208ENST00000489554 SMIM11BQ8TCY0 68 aa6.57□□□□□ -1.36
SCAMP4-208ENST00000489554 PLA2G2DQ9UNK4 145 aa6.57□□□□□ -1.36
SCAMP4-208ENST00000489554 IGLV5-37A0A075B6J1 123 aa6.56□□□□□ -1.36
SCAMP4-208ENST00000489554 CLEC2BQ92478 149 aa6.55□□□□□ -1.36
SCAMP4-208ENST00000489554 VPS25Q9BRG1 176 aa6.55□□□□□ -1.36
SCAMP4-208ENST00000489554 M0R378 163 aa6.54□□□□□ -1.36
SCAMP4-208ENST00000489554 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
SCAMP4-208ENST00000489554 TRBV7-6A0A0J9YX20 115 aa6.53□□□□□ -1.36
SCAMP4-208ENST00000489554 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
SCAMP4-208ENST00000489554 IGLV6-57P01721 117 aa6.52□□□□□ -1.37
SCAMP4-208ENST00000489554 BAALC-AS2P0C853 105 aa6.52□□□□□ -1.37
SCAMP4-208ENST00000489554 SPINK6Q6UWN8 80 aa6.52□□□□□ -1.37
SCAMP4-208ENST00000489554 KRTAP11-1Q8IUC1 163 aa6.52□□□□□ -1.37
SCAMP4-208ENST00000489554 MTURNQ8N3F0 131 aa6.52□□□□□ -1.37
SCAMP4-208ENST00000489554 C22orf24Q9Y442 160 aa6.52□□□□□ -1.37
SCAMP4-208ENST00000489554 NCR3O14931 201 aa6.51□□□□□ -1.37
SCAMP4-208ENST00000489554 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
SCAMP4-208ENST00000489554 PHF5AQ7RTV0 110 aaKnown RBP6.51□□□□□ -1.37
SCAMP4-208ENST00000489554 REG3GQ6UW15 175 aa6.5□□□□□ -1.37
SCAMP4-208ENST00000489554 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
SCAMP4-208ENST00000489554 ORMDL1Q9P0S3 153 aa6.5□□□□□ -1.37
SCAMP4-208ENST00000489554 TRAV23DV6A0A075B6W5 121 aa6.49□□□□□ -1.37
SCAMP4-208ENST00000489554 TMEM256-PLSCR3K7ERE1 68 aa6.49□□□□□ -1.37
SCAMP4-208ENST00000489554 ACYP1P07311 99 aa6.49□□□□□ -1.37
SCAMP4-208ENST00000489554 DIRC1Q969H9 104 aa6.49□□□□□ -1.37
SCAMP4-208ENST00000489554 LINC00167Q96N53 147 aa6.49□□□□□ -1.37
SCAMP4-208ENST00000489554 C21orf62-AS1Q17RA5 79 aa6.48□□□□□ -1.37
SCAMP4-208ENST00000489554 C6orf99Q4VX62 202 aa6.48□□□□□ -1.37
SCAMP4-208ENST00000489554 MRPL55Q7Z7F7 128 aaKnown RBP6.48□□□□□ -1.37
SCAMP4-208ENST00000489554 PSORS1C2Q9UIG4 136 aa6.48□□□□□ -1.37
SCAMP4-208ENST00000489554 IGLV1-50A0A075B6I6 118 aa6.47□□□□□ -1.37
SCAMP4-208ENST00000489554 TRBV10-3A0A0K0K1G6 114 aa6.47□□□□□ -1.37
SCAMP4-208ENST00000489554 JMJD7-PLA2G4BH0Y9G9 81 aa6.47□□□□□ -1.37
SCAMP4-208ENST00000489554 FAM240AA0A1B0GVK7 77 aa6.46□□□□□ -1.38
SCAMP4-208ENST00000489554 hADV29S1A0JD25 119 aa6.46□□□□□ -1.38
SCAMP4-208ENST00000489554 ZNF73O43830 326 aaPredicted RBP6.46□□□□□ -1.38
SCAMP4-208ENST00000489554 COX7BP24311 80 aa6.46□□□□□ -1.38
SCAMP4-208ENST00000489554 C1orf137Q5JT78 98 aa6.46□□□□□ -1.38
SCAMP4-208ENST00000489554 LINC00575Q6W349 94 aa6.46□□□□□ -1.38
SCAMP4-208ENST00000489554 FAM218AQ96MZ4 157 aa6.46□□□□□ -1.38
SCAMP4-208ENST00000489554 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
SCAMP4-208ENST00000489554 RPL37AP8A6NKH3 93 aa6.45□□□□□ -1.38
SCAMP4-208ENST00000489554 SIGMAR1Q99720 223 aa6.45□□□□□ -1.38
SCAMP4-208ENST00000489554 TEX49A0A1B0GTD5 131 aa6.44□□□□□ -1.38
SCAMP4-208ENST00000489554 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.44□□□□□ -1.38
SCAMP4-208ENST00000489554 KCNQ1DNQ9H478 68 aa6.44□□□□□ -1.38
SCAMP4-208ENST00000489554 TNXBP22105 4242 aa6.44□□□□□ -1.38
SCAMP4-208ENST00000489554 KRTAP4-16G5E9R7 235 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms