RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 COLCA2A8K830 154 aa4.92□□□□□ -1.62
SSBP1-212ENST00000489378 HIGD1CA8MV81 97 aa4.92□□□□□ -1.62
SSBP1-212ENST00000489378 SLC25A20O43772 301 aa4.92□□□□□ -1.62
SSBP1-212ENST00000489378 DDTP30046 118 aa4.92□□□□□ -1.62
SSBP1-212ENST00000489378 ZC2HC1BQ5TFG8 222 aa4.92□□□□□ -1.62
SSBP1-212ENST00000489378 GNB1LQ9BYB4 327 aa4.92□□□□□ -1.62
SSBP1-212ENST00000489378 C20orf202A1L168 122 aa4.91□□□□□ -1.62
SSBP1-212ENST00000489378 MT-ND4LP03901 98 aa4.91□□□□□ -1.62
SSBP1-212ENST00000489378 CFC1P0CG37 223 aa4.91□□□□□ -1.62
SSBP1-212ENST00000489378 Q8N9P0 234 aaPredicted RBP4.91□□□□□ -1.62
SSBP1-212ENST00000489378 C20orf78Q9BR46 151 aa4.91□□□□□ -1.62
SSBP1-212ENST00000489378 A0A1B0GX51 115 aa4.9□□□□□ -1.62
SSBP1-212ENST00000489378 J3KT08 172 aa4.9□□□□□ -1.62
SSBP1-212ENST00000489378 NDUFC2O95298 119 aa4.9□□□□□ -1.62
SSBP1-212ENST00000489378 MRPL51Q4U2R6 128 aaKnown RBP4.9□□□□□ -1.62
SSBP1-212ENST00000489378 MRPL54Q6P161 138 aaKnown RBP4.9□□□□□ -1.62
SSBP1-212ENST00000489378 FAM218AQ96MZ4 157 aa4.9□□□□□ -1.62
SSBP1-212ENST00000489378 SMIM2Q9BVW6 85 aa4.9□□□□□ -1.62
SSBP1-212ENST00000489378 TRBV24-1A0A075B6N3 115 aa4.89□□□□□ -1.63
SSBP1-212ENST00000489378 FAM236DA0A1B0GTK5 79 aa4.89□□□□□ -1.63
SSBP1-212ENST00000489378 FAM236CP0DP71 79 aa4.89□□□□□ -1.63
SSBP1-212ENST00000489378 IFI27P40305 119 aaPredicted RBP4.89□□□□□ -1.63
SSBP1-212ENST00000489378 RPS29P62273 56 aaKnown RBP4.89□□□□□ -1.63
SSBP1-212ENST00000489378 OCIAD2Q56VL3 154 aa4.89□□□□□ -1.63
SSBP1-212ENST00000489378 TMEM136Q6ZRR5 245 aa4.89□□□□□ -1.63
SSBP1-212ENST00000489378 TMEM141Q96I45 108 aa4.89□□□□□ -1.63
SSBP1-212ENST00000489378 C9orf92A6NGG3 77 aa4.89□□□□□ -1.63
SSBP1-212ENST00000489378 TEX43Q6ZNM6 134 aa4.89□□□□□ -1.63
SSBP1-212ENST00000489378 PYGO1Q9Y3Y4 419 aa4.89□□□□□ -1.63
SSBP1-212ENST00000489378 IGLV5-45A0A087WSX0 123 aa4.88□□□□□ -1.63
SSBP1-212ENST00000489378 FAM104BQ5XKR9 115 aa4.88□□□□□ -1.63
SSBP1-212ENST00000489378 URB1-AS1Q96HZ7 61 aa4.88□□□□□ -1.63
SSBP1-212ENST00000489378 SMCO4Q9NRQ5 59 aa4.88□□□□□ -1.63
SSBP1-212ENST00000489378 NAT8BQ9UHF3 227 aa4.88□□□□□ -1.63
SSBP1-212ENST00000489378 ZNF706Q9Y5V0 76 aaPredicted RBP4.88□□□□□ -1.63
SSBP1-212ENST00000489378 CKS2P33552 79 aa4.87□□□□□ -1.63
SSBP1-212ENST00000489378 PSMB2P49721 201 aa4.87□□□□□ -1.63
SSBP1-212ENST00000489378 MOBPQ13875 183 aa4.87□□□□□ -1.63
SSBP1-212ENST00000489378 SCGB1D4Q6XE38 83 aa4.87□□□□□ -1.63
SSBP1-212ENST00000489378 CDKN2A-AS1Q9UH64 79 aa4.87□□□□□ -1.63
SSBP1-212ENST00000489378 ERG28Q9UKR5 140 aa4.87□□□□□ -1.63
SSBP1-212ENST00000489378 TRAV9-1A0A075B6T8 112 aa4.86□□□□□ -1.63
SSBP1-212ENST00000489378 NPYP01303 97 aa4.86□□□□□ -1.63
SSBP1-212ENST00000489378 CXCL5P42830 114 aa4.86□□□□□ -1.63
SSBP1-212ENST00000489378 HIST1H4GQ99525 98 aa4.86□□□□□ -1.63
SSBP1-212ENST00000489378 C8orf87E5RJ46 101 aa4.85□□□□□ -1.63
SSBP1-212ENST00000489378 M0R143 59 aa4.85□□□□□ -1.63
SSBP1-212ENST00000489378 NDUFS5O43920 106 aa4.85□□□□□ -1.63
SSBP1-212ENST00000489378 JOSD1Q15040 202 aaPredicted RBP4.85□□□□□ -1.63
SSBP1-212ENST00000489378 KRTAP6-3Q3LI67 103 aa4.85□□□□□ -1.63
SSBP1-212ENST00000489378 KIAA1644Q3SXP7 199 aa4.85□□□□□ -1.63
SSBP1-212ENST00000489378 ATP5L2Q7Z4Y8 100 aa4.85□□□□□ -1.63
SSBP1-212ENST00000489378 Q8NDZ9 215 aa4.85□□□□□ -1.63
SSBP1-212ENST00000489378 AMELXQ99217 191 aa4.85□□□□□ -1.63
SSBP1-212ENST00000489378 LAMTOR2Q9Y2Q5 125 aa4.85□□□□□ -1.63
SSBP1-212ENST00000489378 D6R8Y8 96 aa4.84□□□□□ -1.63
SSBP1-212ENST00000489378 LINC00483Q53H64 154 aa4.84□□□□□ -1.63
SSBP1-212ENST00000489378 C2orf66Q6UXQ4 117 aa4.84□□□□□ -1.63
SSBP1-212ENST00000489378 FAM19A3Q7Z5A8 133 aa4.84□□□□□ -1.63
SSBP1-212ENST00000489378 NOTCH2NLQ7Z3S9 236 aa4.83□□□□□ -1.64
SSBP1-212ENST00000489378 ANKRD29Q8N6D5 301 aa4.83□□□□□ -1.64
SSBP1-212ENST00000489378 SMCR5Q8TEV8 140 aa4.83□□□□□ -1.64
SSBP1-212ENST00000489378 COX7B2Q8TF08 81 aa4.83□□□□□ -1.64
SSBP1-212ENST00000489378 SMIM1B2RUZ4 78 aa4.82□□□□□ -1.64
SSBP1-212ENST00000489378 TRGC2P03986 189 aa4.82□□□□□ -1.64
SSBP1-212ENST00000489378 HERVK_113P63121 156 aa4.82□□□□□ -1.64
SSBP1-212ENST00000489378 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
SSBP1-212ENST00000489378 FABP9Q0Z7S8 132 aa4.81□□□□□ -1.64
SSBP1-212ENST00000489378 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
SSBP1-212ENST00000489378 Q6Q795 121 aa4.81□□□□□ -1.64
SSBP1-212ENST00000489378 CST9LQ9H4G1 147 aa4.81□□□□□ -1.64
SSBP1-212ENST00000489378 SND1-IT1Q9HBX3 110 aa4.81□□□□□ -1.64
SSBP1-212ENST00000489378 C9JAW5 83 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 LAMTOR3Q9UHA4 124 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST1H2BKO60814 126 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST1H2BJP06899 126 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST1H2BOP23527 126 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST1H2BBP33778 126 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST1H2BDP58876 126 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST1H2BCP62807 126 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST2H2BEQ16778 126 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.8□□□□□ -1.64
SSBP1-212ENST00000489378 C18orf32Q8TCD1 76 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST1H2BHQ93079 126 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST1H2BNQ99877 126 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 HIST1H2BMQ99879 126 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 TRAPPC1Q9Y5R8 145 aa4.8□□□□□ -1.64
SSBP1-212ENST00000489378 LOC389332A0A1B0GUA5 103 aa4.79□□□□□ -1.64
SSBP1-212ENST00000489378 IGIPA6NJ69 53 aa4.79□□□□□ -1.64
SSBP1-212ENST00000489378 IGLV6-57P01721 117 aa4.79□□□□□ -1.64
SSBP1-212ENST00000489378 MT2AP02795 61 aa4.79□□□□□ -1.64
SSBP1-212ENST00000489378 SEC11AP67812 179 aa4.79□□□□□ -1.64
SSBP1-212ENST00000489378 TIMM17AQ99595 171 aa4.79□□□□□ -1.64
SSBP1-212ENST00000489378 CYSLTR1Q9Y271 337 aa4.79□□□□□ -1.64
SSBP1-212ENST00000489378 A0A096LNJ9 63 aa4.78□□□□□ -1.64
SSBP1-212ENST00000489378 J3QR89 54 aa4.78□□□□□ -1.64
SSBP1-212ENST00000489378 RPL37P61927 97 aaKnown RBP4.78□□□□□ -1.64
SSBP1-212ENST00000489378 KRTAP5-11Q6L8G4 156 aa4.78□□□□□ -1.64
SSBP1-212ENST00000489378 PRELID3AQ96N28 172 aa4.78□□□□□ -1.64
SSBP1-212ENST00000489378 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms