RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 CFTRP13569 1480 aa-2.9□□□□□ -2.87
CBWD1-216ENST00000489272 CPSF1Q10570 1443 aaKnown RBP-2.91□□□□□ -2.87
CBWD1-216ENST00000489272 RGPD8O14715 1765 aaPredicted RBP-2.91□□□□□ -2.88
CBWD1-216ENST00000489272 RGPD5Q99666 1765 aa-2.91□□□□□ -2.88
CBWD1-216ENST00000489272 IGLV5-48A0A075B6I7 105 aa-2.91□□□□□ -2.88
CBWD1-216ENST00000489272 H3BQF6 201 aa-2.91□□□□□ -2.88
CBWD1-216ENST00000489272 SMCO1Q147U7 214 aa-2.91□□□□□ -2.88
CBWD1-216ENST00000489272 DEFB107AQ8IZN7 70 aa-2.91□□□□□ -2.88
CBWD1-216ENST00000489272 CCDC167Q9P0B6 97 aa-2.91□□□□□ -2.88
CBWD1-216ENST00000489272 LINC00474Q9P2X8 69 aa-2.91□□□□□ -2.88
CBWD1-216ENST00000489272 RGPD3A6NKT7 1758 aaPredicted RBP-2.92□□□□□ -2.88
CBWD1-216ENST00000489272 RGPD4Q7Z3J3 1758 aa-2.92□□□□□ -2.88
CBWD1-216ENST00000489272 UBR3Q6ZT12 1888 aa-2.92□□□□□ -2.88
CBWD1-216ENST00000489272 H0Y9P7 68 aa-2.92□□□□□ -2.88
CBWD1-216ENST00000489272 SMIM15Q7Z3B0 74 aa-2.92□□□□□ -2.88
CBWD1-216ENST00000489272 TCEAL4Q96EI5 215 aa-2.92□□□□□ -2.88
CBWD1-216ENST00000489272 SERP1Q9Y6X1 66 aa-2.92□□□□□ -2.88
CBWD1-216ENST00000489272 SCN7AQ01118 1682 aa-2.92□□□□□ -2.88
CBWD1-216ENST00000489272 COX7BP24311 80 aa-2.93□□□□□ -2.88
CBWD1-216ENST00000489272 PSMG4Q5JS54 123 aa-2.93□□□□□ -2.88
CBWD1-216ENST00000489272 COPS9Q8WXC6 57 aa-2.93□□□□□ -2.88
CBWD1-216ENST00000489272 ARL11Q969Q4 196 aa-2.93□□□□□ -2.88
CBWD1-216ENST00000489272 PPP3R2Q96LZ3 170 aa-2.93□□□□□ -2.88
CBWD1-216ENST00000489272 CUL7Q14999 1698 aa-2.93□□□□□ -2.88
CBWD1-216ENST00000489272 PCNTO95613 3336 aa-2.93□□□□□ -2.88
CBWD1-216ENST00000489272 SPEF2Q9C093 1822 aa-2.93□□□□□ -2.88
CBWD1-216ENST00000489272 SHROOM2Q13796 1616 aa-2.93□□□□□ -2.88
CBWD1-216ENST00000489272 COPZ1P61923 177 aa-2.94□□□□□ -2.88
CBWD1-216ENST00000489272 SFTA2Q6UW10 78 aa-2.94□□□□□ -2.88
CBWD1-216ENST00000489272 COMMD6Q7Z4G1 85 aa-2.94□□□□□ -2.88
CBWD1-216ENST00000489272 RERGLQ9H628 205 aa-2.94□□□□□ -2.88
CBWD1-216ENST00000489272 USP32Q8NFA0 1604 aa-2.94□□□□□ -2.88
CBWD1-216ENST00000489272 MAGI3Q5TCQ9 1506 aa-2.94□□□□□ -2.88
CBWD1-216ENST00000489272 TNRC6CQ9HCJ0 1690 aaKnown RBP-2.95□□□□□ -2.88
CBWD1-216ENST00000489272 TOGARAM1Q9Y4F4 1720 aa-2.95□□□□□ -2.88
CBWD1-216ENST00000489272 IAPPP10997 89 aa-2.95□□□□□ -2.88
CBWD1-216ENST00000489272 RPS25P62851 125 aaKnown RBP-2.95□□□□□ -2.88
CBWD1-216ENST00000489272 PDCD10Q9BUL8 212 aa-2.95□□□□□ -2.88
CBWD1-216ENST00000489272 AP4S1Q9Y587 144 aa-2.95□□□□□ -2.88
CBWD1-216ENST00000489272 MRC2Q9UBG0 1479 aa-2.96□□□□□ -2.88
CBWD1-216ENST00000489272 CEP152O94986 1710 aa-2.96□□□□□ -2.88
CBWD1-216ENST00000489272 DCHS1Q96JQ0 3298 aa-2.96□□□□□ -2.88
CBWD1-216ENST00000489272 A8MTW9 85 aa-2.96□□□□□ -2.88
CBWD1-216ENST00000489272 TRAPPC2P0DI81 140 aa-2.96□□□□□ -2.88
CBWD1-216ENST00000489272 TRAPPC2BP0DI82 140 aa-2.96□□□□□ -2.88
CBWD1-216ENST00000489272 CKS1BP61024 79 aa-2.96□□□□□ -2.88
CBWD1-216ENST00000489272 RPL38P63173 70 aaKnown RBP-2.96□□□□□ -2.88
CBWD1-216ENST00000489272 CRYBG1Q9Y4K1 1723 aa-2.96□□□□□ -2.88
CBWD1-216ENST00000489272 TARBP1Q13395 1621 aaKnown RBP-2.97□□□□□ -2.88
CBWD1-216ENST00000489272 IFI6P09912 130 aa-2.97□□□□□ -2.88
CBWD1-216ENST00000489272 TRGV9Q99603 122 aa-2.97□□□□□ -2.88
CBWD1-216ENST00000489272 WDFY4Q6ZS81 3184 aa-2.97□□□□□ -2.89
CBWD1-216ENST00000489272 SPART-AS1P0CW21 52 aa-2.98□□□□□ -2.89
CBWD1-216ENST00000489272 HSD52Q0P140 79 aa-2.98□□□□□ -2.89
CBWD1-216ENST00000489272 SMIM21Q3B7S5 101 aa-2.98□□□□□ -2.89
CBWD1-216ENST00000489272 SZT2Q5T011 3432 aa-2.99□□□□□ -2.89
CBWD1-216ENST00000489272 C7orf77A4D0Y5 90 aa-2.99□□□□□ -2.89
CBWD1-216ENST00000489272 F8WEM9 126 aa-2.99□□□□□ -2.89
CBWD1-216ENST00000489272 MT-ATP8P03928 68 aa-2.99□□□□□ -2.89
CBWD1-216ENST00000489272 DEFB136Q30KP8 78 aa-2.99□□□□□ -2.89
CBWD1-216ENST00000489272 A2ML1A8K2U0 1454 aa-2.99□□□□□ -2.89
CBWD1-216ENST00000489272 GRIN2AQ12879 1464 aa-2.99□□□□□ -2.89
CBWD1-216ENST00000489272 EP400Q96L91 3159 aa-2.99□□□□□ -2.89
CBWD1-216ENST00000489272 DEPDC5O75140 1603 aa-3□□□□□ -2.89
CBWD1-216ENST00000489272 MUC3AQ02505 3323 aa-3□□□□□ -2.89
CBWD1-216ENST00000489272 WIZO95785 1651 aa-3□□□□□ -2.89
CBWD1-216ENST00000489272 GNG14A0A1W2PPG7 69 aa-3□□□□□ -2.89
CBWD1-216ENST00000489272 LYNX1G3V0Z9 82 aa-3□□□□□ -2.89
CBWD1-216ENST00000489272 Q56UQ5 140 aa-3□□□□□ -2.89
CBWD1-216ENST00000489272 C8orf59Q8N0T1 100 aaPredicted RBP-3□□□□□ -2.89
CBWD1-216ENST00000489272 LY75O60449 1722 aa-3□□□□□ -2.89
CBWD1-216ENST00000489272 QSER1Q2KHR3 1735 aa-3□□□□□ -2.89
CBWD1-216ENST00000489272 MAST1Q9Y2H9 1570 aa-3□□□□□ -2.89
CBWD1-216ENST00000489272 COX6CP09669 75 aa-3.01□□□□□ -2.89
CBWD1-216ENST00000489272 TSTD1Q8NFU3 115 aa-3.01□□□□□ -2.89
CBWD1-216ENST00000489272 C12orf57Q99622 126 aa-3.01□□□□□ -2.89
CBWD1-216ENST00000489272 VAMP8Q9BV40 100 aa-3.01□□□□□ -2.89
CBWD1-216ENST00000489272 MANBALQ9NQG1 85 aa-3.01□□□□□ -2.89
CBWD1-216ENST00000489272 SMARCA2P51531 1590 aa-3.02□□□□□ -2.89
CBWD1-216ENST00000489272 MON2Q7Z3U7 1717 aa-3.02□□□□□ -2.89
CBWD1-216ENST00000489272 LRRC9Q6ZRR7 1453 aa-3.03□□□□□ -2.89
CBWD1-216ENST00000489272 CEP250Q9BV73 2442 aa-3.03□□□□□ -2.89
CBWD1-216ENST00000489272 SHPRHQ149N8 1683 aa-3.03□□□□□ -2.89
CBWD1-216ENST00000489272 F6UZH7 168 aa-3.03□□□□□ -2.89
CBWD1-216ENST00000489272 S100PP25815 95 aa-3.03□□□□□ -2.89
CBWD1-216ENST00000489272 PARP4Q9UKK3 1724 aaKnown RBP-3.03□□□□□ -2.89
CBWD1-216ENST00000489272 SAMD9Q5K651 1589 aa-3.04□□□□□ -2.9
CBWD1-216ENST00000489272 TEX14Q8IWB6 1497 aa-3.04□□□□□ -2.9
CBWD1-216ENST00000489272 IGLC2P0DOY2 106 aa-3.05□□□□□ -2.9
CBWD1-216ENST00000489272 IGLC3P0DOY3 106 aa-3.05□□□□□ -2.9
CBWD1-216ENST00000489272 Q0VG73 95 aa-3.05□□□□□ -2.9
CBWD1-216ENST00000489272 NOP10Q9NPE3 64 aaKnown RBP-3.05□□□□□ -2.9
CBWD1-216ENST00000489272 MIF4GDA9UHW6 222 aaKnown RBP-3.06□□□□□ -2.9
CBWD1-216ENST00000489272 C5P01031 1676 aa-3.06□□□□□ -2.9
CBWD1-216ENST00000489272 WT1-ASQ06250 92 aa-3.06□□□□□ -2.9
CBWD1-216ENST00000489272 DNAH14Q0VDD8 3507 aa-3.06□□□□□ -2.9
CBWD1-216ENST00000489272 PRO1854Q9UHT4 67 aa-3.06□□□□□ -2.9
CBWD1-216ENST00000489272 M0QZ58 72 aa-3.07□□□□□ -2.9
CBWD1-216ENST00000489272 GNG11P61952 73 aa-3.07□□□□□ -2.9
CBWD1-216ENST00000489272 DR1Q01658 176 aa-3.07□□□□□ -2.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms