RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 HIST1H2BCP62807 126 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 HIST2H2BEQ16778 126 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.19□□□□□ -1.26
SRRM1-216ENST00000489130 SOSTDC1Q6X4U4 206 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 HIST1H2BHQ93079 126 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 HIST1H2BNQ99877 126 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 HIST1H2BMQ99879 126 aa7.19□□□□□ -1.26
SRRM1-216ENST00000489130 ADAMTSL4-AS1Q5T5F5 129 aa7.18□□□□□ -1.26
SRRM1-216ENST00000489130 Q6ZRX8 168 aa7.18□□□□□ -1.26
SRRM1-216ENST00000489130 Q8NBF4 154 aa7.18□□□□□ -1.26
SRRM1-216ENST00000489130 Q9BRP9 147 aa7.18□□□□□ -1.26
SRRM1-216ENST00000489130 PPDPFQ9H3Y8 114 aa7.18□□□□□ -1.26
SRRM1-216ENST00000489130 EIF4EBP3O60516 100 aaPredicted RBP7.17□□□□□ -1.26
SRRM1-216ENST00000489130 ERC2-IT1O76042 136 aa7.17□□□□□ -1.26
SRRM1-216ENST00000489130 S100A7L2Q5SY68 101 aa7.17□□□□□ -1.26
SRRM1-216ENST00000489130 TRAV23DV6A0A075B6W5 121 aa7.16□□□□□ -1.26
SRRM1-216ENST00000489130 NPC2P61916 151 aa7.16□□□□□ -1.26
SRRM1-216ENST00000489130 LINC01545Q5VT33 79 aa7.16□□□□□ -1.26
SRRM1-216ENST00000489130 GAGE2AQ6NT46 116 aa7.16□□□□□ -1.26
SRRM1-216ENST00000489130 CDIP1Q9H305 208 aa7.16□□□□□ -1.26
SRRM1-216ENST00000489130 MUC17Q685J3 4493 aa7.15□□□□□ -1.26
SRRM1-216ENST00000489130 FP248Q71RG6 208 aaPredicted RBP7.15□□□□□ -1.26
SRRM1-216ENST00000489130 A0A0U1RQV1 116 aa7.14□□□□□ -1.27
SRRM1-216ENST00000489130 SPINK1P00995 79 aa7.14□□□□□ -1.27
SRRM1-216ENST00000489130 PET117Q6UWS5 81 aa7.14□□□□□ -1.27
SRRM1-216ENST00000489130 LITAFQ99732 161 aa7.14□□□□□ -1.27
SRRM1-216ENST00000489130 ZNF73O43830 326 aaPredicted RBP7.13□□□□□ -1.27
SRRM1-216ENST00000489130 TIMM17BO60830 172 aa7.13□□□□□ -1.27
SRRM1-216ENST00000489130 JOSD1Q15040 202 aaPredicted RBP7.13□□□□□ -1.27
SRRM1-216ENST00000489130 IGLV9-49A0A0B4J1Y8 123 aa7.12□□□□□ -1.27
SRRM1-216ENST00000489130 MOBPQ13875 183 aa7.12□□□□□ -1.27
SRRM1-216ENST00000489130 COA6Q5JTJ3 125 aaKnown RBP7.12□□□□□ -1.27
SRRM1-216ENST00000489130 SSBP3-AS1Q7Z2R9 100 aa7.12□□□□□ -1.27
SRRM1-216ENST00000489130 LINC00308Q8TCZ7 52 aa7.12□□□□□ -1.27
SRRM1-216ENST00000489130 SPANXCQ9NY87 97 aa7.12□□□□□ -1.27
SRRM1-216ENST00000489130 C3orf79P0CE67 100 aa7.11□□□□□ -1.27
SRRM1-216ENST00000489130 RPS29P62273 56 aaKnown RBP7.11□□□□□ -1.27
SRRM1-216ENST00000489130 CBY1Q9Y3M2 126 aa7.11□□□□□ -1.27
SRRM1-216ENST00000489130 ZNF815PA8K554 130 aa7.1□□□□□ -1.27
SRRM1-216ENST00000489130 C5orf52A6NGY3 159 aa7.09□□□□□ -1.27
SRRM1-216ENST00000489130 HINT1P49773 126 aaPredicted RBP7.08□□□□□ -1.28
SRRM1-216ENST00000489130 KRTAP13-3Q3SY46 172 aa7.08□□□□□ -1.28
SRRM1-216ENST00000489130 Q8N377 158 aa7.08□□□□□ -1.28
SRRM1-216ENST00000489130 KRTAP4-12Q9BQ66 201 aa7.08□□□□□ -1.28
SRRM1-216ENST00000489130 SPANXDQ9BXN6 97 aa7.08□□□□□ -1.28
SRRM1-216ENST00000489130 TTTY13Q9BZ97 58 aa7.08□□□□□ -1.28
SRRM1-216ENST00000489130 KRTDAPP60985 99 aa7.07□□□□□ -1.28
SRRM1-216ENST00000489130 ST20-AS1Q8NBB2 130 aa7.07□□□□□ -1.28
SRRM1-216ENST00000489130 OR13C6PQ8NH95 151 aa7.07□□□□□ -1.28
SRRM1-216ENST00000489130 SPRR1BP22528 89 aa7.05□□□□□ -1.28
SRRM1-216ENST00000489130 C9orf153Q5TBE3 101 aa7.05□□□□□ -1.28
SRRM1-216ENST00000489130 LINC00518Q8N0U6 118 aa7.05□□□□□ -1.28
SRRM1-216ENST00000489130 DHRS4-AS1Q9P1J3 65 aa7.05□□□□□ -1.28
SRRM1-216ENST00000489130 C20orf202A1L168 122 aa7.04□□□□□ -1.28
SRRM1-216ENST00000489130 SLC25A20O43772 301 aa7.03□□□□□ -1.28
SRRM1-216ENST00000489130 ELOF1P60002 83 aaKnown RBP7.03□□□□□ -1.28
SRRM1-216ENST00000489130 ANKRD39Q53RE8 183 aa7.03□□□□□ -1.28
SRRM1-216ENST00000489130 SCGB1D4Q6XE38 83 aa7.03□□□□□ -1.28
SRRM1-216ENST00000489130 SLC25A34Q6PIV7 304 aa7.02□□□□□ -1.29
SRRM1-216ENST00000489130 COX7BP24311 80 aa7.01□□□□□ -1.29
SRRM1-216ENST00000489130 ASB16-AS1Q495Z4 193 aa7.01□□□□□ -1.29
SRRM1-216ENST00000489130 C6orf99Q4VX62 202 aa7.01□□□□□ -1.29
SRRM1-216ENST00000489130 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
SRRM1-216ENST00000489130 COPS9Q8WXC6 57 aa7.01□□□□□ -1.29
SRRM1-216ENST00000489130 IFITM1P13164 125 aa7□□□□□ -1.29
SRRM1-216ENST00000489130 AKR1D1P51857 326 aa7□□□□□ -1.29
SRRM1-216ENST00000489130 Q6ZVH6 145 aa7□□□□□ -1.29
SRRM1-216ENST00000489130 ATOH7Q8N100 152 aa7□□□□□ -1.29
SRRM1-216ENST00000489130 TRBV7-6A0A0J9YX20 115 aa6.99□□□□□ -1.29
SRRM1-216ENST00000489130 PCP2Q8IVA1 136 aa6.99□□□□□ -1.29
SRRM1-216ENST00000489130 KRTAP9-9Q9BYP9 154 aa6.99□□□□□ -1.29
SRRM1-216ENST00000489130 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
SRRM1-216ENST00000489130 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
SRRM1-216ENST00000489130 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
SRRM1-216ENST00000489130 A0A1B0GWB2 263 aa6.96□□□□□ -1.3
SRRM1-216ENST00000489130 SEC61BP60468 96 aaKnown RBP6.96□□□□□ -1.3
SRRM1-216ENST00000489130 MUSTN1Q8IVN3 82 aa6.96□□□□□ -1.3
SRRM1-216ENST00000489130 LIMD2Q9BT23 127 aa6.96□□□□□ -1.3
SRRM1-216ENST00000489130 TEX49A0A1B0GTD5 131 aa6.95□□□□□ -1.3
SRRM1-216ENST00000489130 A6NDN8 102 aa6.95□□□□□ -1.3
SRRM1-216ENST00000489130 SNRPEP62304 92 aaKnown RBP6.95□□□□□ -1.3
SRRM1-216ENST00000489130 TAL2Q16559 108 aa6.95□□□□□ -1.3
SRRM1-216ENST00000489130 DEFB105AQ8NG35 78 aa6.94□□□□□ -1.3
SRRM1-216ENST00000489130 IGLV5-48A0A075B6I7 105 aa6.93□□□□□ -1.3
SRRM1-216ENST00000489130 TRAV13-2A0A0B4J235 113 aa6.93□□□□□ -1.3
SRRM1-216ENST00000489130 LINC01547P58512 204 aaPredicted RBP6.93□□□□□ -1.3
SRRM1-216ENST00000489130 CD164Q04900 197 aa6.93□□□□□ -1.3
SRRM1-216ENST00000489130 Q1RN00 199 aa6.93□□□□□ -1.3
SRRM1-216ENST00000489130 HRCT1Q6UXD1 115 aa6.93□□□□□ -1.3
SRRM1-216ENST00000489130 HIST3H2BBQ8N257 126 aa6.93□□□□□ -1.3
SRRM1-216ENST00000489130 HIST1H2BLQ99880 126 aa6.93□□□□□ -1.3
SRRM1-216ENST00000489130 A4D1N5 150 aa6.92□□□□□ -1.3
SRRM1-216ENST00000489130 SMIM29Q86T20 159 aa6.92□□□□□ -1.3
SRRM1-216ENST00000489130 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
SRRM1-216ENST00000489130 PRO1933Q9H354 126 aa6.92□□□□□ -1.3
SRRM1-216ENST00000489130 S100A2P29034 98 aa6.91□□□□□ -1.3
SRRM1-216ENST00000489130 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
SRRM1-216ENST00000489130 SMIM11BQ8TCY0 68 aa6.91□□□□□ -1.3
SRRM1-216ENST00000489130 NHP2Q9NX24 153 aaKnown RBP6.9□□□□□ -1.3
SRRM1-216ENST00000489130 Q5XG85 94 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms