RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 TRIAP1O43715 76 aa6.7□□□□□ -1.34
USP11-209ENST00000488848 ZNF73O43830 326 aaPredicted RBP6.69□□□□□ -1.34
USP11-209ENST00000488848 FUSP35637 526 aaKnown RBP eCLIP6.69□□□□□ -1.34
USP11-209ENST00000488848 A0A1B0GX51 115 aa6.68□□□□□ -1.34
USP11-209ENST00000488848 H0YGX0 51 aa6.68□□□□□ -1.34
USP11-209ENST00000488848 H3BUT2 72 aa6.68□□□□□ -1.34
USP11-209ENST00000488848 OR13C6PQ8NH95 151 aa6.68□□□□□ -1.34
USP11-209ENST00000488848 FAM30AQ9NZY2 134 aa6.68□□□□□ -1.34
USP11-209ENST00000488848 TRBV20-1A0A075B6N2 111 aa6.67□□□□□ -1.34
USP11-209ENST00000488848 H0Y9J4 135 aa6.67□□□□□ -1.34
USP11-209ENST00000488848 COX6CP09669 75 aa6.67□□□□□ -1.34
USP11-209ENST00000488848 ELOF1P60002 83 aaKnown RBP6.67□□□□□ -1.34
USP11-209ENST00000488848 SCXQ7RTU7 201 aa6.67□□□□□ -1.34
USP11-209ENST00000488848 CIRBP-AS1Q8TBR5 109 aa6.67□□□□□ -1.34
USP11-209ENST00000488848 DIRC1Q969H9 104 aa6.67□□□□□ -1.34
USP11-209ENST00000488848 SRRM2Q9UQ35 2752 aaKnown RBP6.66□□□□□ -1.34
USP11-209ENST00000488848 HSPG2P98160 4391 aa6.66□□□□□ -1.34
USP11-209ENST00000488848 FAT1Q14517 4588 aa6.66□□□□□ -1.34
USP11-209ENST00000488848 FABP2P12104 132 aa6.66□□□□□ -1.34
USP11-209ENST00000488848 Q1RN00 199 aa6.66□□□□□ -1.34
USP11-209ENST00000488848 C6orf99Q4VX62 202 aa6.66□□□□□ -1.34
USP11-209ENST00000488848 LST1O00453 97 aa6.65□□□□□ -1.34
USP11-209ENST00000488848 INAFM2P0DMQ5 153 aa6.65□□□□□ -1.34
USP11-209ENST00000488848 PHF5AQ7RTV0 110 aaKnown RBP6.65□□□□□ -1.34
USP11-209ENST00000488848 LINC00528Q8N1L1 170 aa6.65□□□□□ -1.34
USP11-209ENST00000488848 GAGE10A6NGK3 116 aa6.64□□□□□ -1.35
USP11-209ENST00000488848 H7C2G1 150 aa6.64□□□□□ -1.35
USP11-209ENST00000488848 TRACP01848 142 aa6.64□□□□□ -1.35
USP11-209ENST00000488848 VAMP3Q15836 100 aa6.64□□□□□ -1.35
USP11-209ENST00000488848 REG3GQ6UW15 175 aa6.64□□□□□ -1.35
USP11-209ENST00000488848 Q6ZRX8 168 aa6.64□□□□□ -1.35
USP11-209ENST00000488848 KRTAP13-1Q8IUC0 172 aa6.64□□□□□ -1.35
USP11-209ENST00000488848 LINC01600Q96MT4 127 aa6.64□□□□□ -1.35
USP11-209ENST00000488848 B5MCH6 92 aa6.63□□□□□ -1.35
USP11-209ENST00000488848 K7EP34 96 aa6.63□□□□□ -1.35
USP11-209ENST00000488848 PSMB2P49721 201 aa6.63□□□□□ -1.35
USP11-209ENST00000488848 KRTAP11-1Q8IUC1 163 aa6.63□□□□□ -1.35
USP11-209ENST00000488848 RPL37AP8A6NKH3 93 aa6.62□□□□□ -1.35
USP11-209ENST00000488848 BCE1O60756 84 aa6.62□□□□□ -1.35
USP11-209ENST00000488848 LINC00575Q6W349 94 aa6.62□□□□□ -1.35
USP11-209ENST00000488848 NAA38Q9BRA0 125 aaKnown RBP6.62□□□□□ -1.35
USP11-209ENST00000488848 CDK2AP2O75956 126 aa6.61□□□□□ -1.35
USP11-209ENST00000488848 TCL1BO95988 128 aa6.61□□□□□ -1.35
USP11-209ENST00000488848 COX7BP24311 80 aa6.61□□□□□ -1.35
USP11-209ENST00000488848 XGP55808 180 aa6.61□□□□□ -1.35
USP11-209ENST00000488848 UBE2BP63146 152 aa6.61□□□□□ -1.35
USP11-209ENST00000488848 ATXN8Q156A1 80 aa6.61□□□□□ -1.35
USP11-209ENST00000488848 FAM218AQ96MZ4 157 aa6.61□□□□□ -1.35
USP11-209ENST00000488848 DHRS4-AS1Q9P1J3 65 aa6.61□□□□□ -1.35
USP11-209ENST00000488848 SPCS1Q9Y6A9 102 aa6.61□□□□□ -1.35
USP11-209ENST00000488848 GTF2H5Q6ZYL4 71 aa6.6□□□□□ -1.35
USP11-209ENST00000488848 DPH3Q96FX2 82 aa6.6□□□□□ -1.35
USP11-209ENST00000488848 PSORS1C2Q9UIG4 136 aa6.6□□□□□ -1.35
USP11-209ENST00000488848 KIAA1109Q2LD37 5005 aa6.59□□□□□ -1.35
USP11-209ENST00000488848 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.35
USP11-209ENST00000488848 A0A1B0GV90 55 aa6.59□□□□□ -1.35
USP11-209ENST00000488848 ETDCA0A1B0GVM5 59 aa6.59□□□□□ -1.35
USP11-209ENST00000488848 SCGB1C2P0DMR2 95 aa6.59□□□□□ -1.35
USP11-209ENST00000488848 H3BQ85 93 aa6.58□□□□□ -1.36
USP11-209ENST00000488848 CLEC2BQ92478 149 aa6.58□□□□□ -1.36
USP11-209ENST00000488848 Q9BRP9 147 aa6.58□□□□□ -1.36
USP11-209ENST00000488848 SNCGO76070 127 aa6.57□□□□□ -1.36
USP11-209ENST00000488848 UBE2V1Q13404 147 aa6.57□□□□□ -1.36
USP11-209ENST00000488848 OCIAD2Q56VL3 154 aa6.57□□□□□ -1.36
USP11-209ENST00000488848 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.57□□□□□ -1.36
USP11-209ENST00000488848 SMCR5Q8TEV8 140 aa6.57□□□□□ -1.36
USP11-209ENST00000488848 PPDPFLQ8WWR9 84 aa6.57□□□□□ -1.36
USP11-209ENST00000488848 PRO0461Q9UI25 63 aa6.57□□□□□ -1.36
USP11-209ENST00000488848 IGLV5-48A0A075B6I7 105 aa6.56□□□□□ -1.36
USP11-209ENST00000488848 hADV29S1A0JD25 119 aa6.56□□□□□ -1.36
USP11-209ENST00000488848 SLC25A20O43772 301 aa6.56□□□□□ -1.36
USP11-209ENST00000488848 H3BMG7 143 aa6.55□□□□□ -1.36
USP11-209ENST00000488848 H3BT86 120 aa6.55□□□□□ -1.36
USP11-209ENST00000488848 GHRHP01286 108 aa6.55□□□□□ -1.36
USP11-209ENST00000488848 ZNF861PO60384 105 aa6.54□□□□□ -1.36
USP11-209ENST00000488848 IGLV7-43P04211 117 aa6.54□□□□□ -1.36
USP11-209ENST00000488848 FAM19A1Q7Z5A9 133 aa6.54□□□□□ -1.36
USP11-209ENST00000488848 F8W1H4 67 aa6.53□□□□□ -1.36
USP11-209ENST00000488848 DNAL4O96015 105 aa6.53□□□□□ -1.36
USP11-209ENST00000488848 SPRR1BP22528 89 aa6.53□□□□□ -1.36
USP11-209ENST00000488848 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
USP11-209ENST00000488848 LINC01547P58512 204 aaPredicted RBP6.52□□□□□ -1.37
USP11-209ENST00000488848 PRLHP81277 87 aa6.52□□□□□ -1.37
USP11-209ENST00000488848 C1orf137Q5JT78 98 aa6.52□□□□□ -1.37
USP11-209ENST00000488848 UBE2AP49459 152 aa6.51□□□□□ -1.37
USP11-209ENST00000488848 Q6ZQY7 126 aa6.51□□□□□ -1.37
USP11-209ENST00000488848 ORMDL1Q9P0S3 153 aa6.51□□□□□ -1.37
USP11-209ENST00000488848 C9JAW5 83 aa6.5□□□□□ -1.37
USP11-209ENST00000488848 TMEM256-PLSCR3K7ERE1 68 aa6.5□□□□□ -1.37
USP11-209ENST00000488848 ERC2-IT1O76042 136 aa6.5□□□□□ -1.37
USP11-209ENST00000488848 SMCPP49901 116 aaPredicted RBP6.5□□□□□ -1.37
USP11-209ENST00000488848 LINC00483Q53H64 154 aa6.5□□□□□ -1.37
USP11-209ENST00000488848 HAMPP81172 84 aa6.49□□□□□ -1.37
USP11-209ENST00000488848 ANKRD29Q8N6D5 301 aa6.49□□□□□ -1.37
USP11-209ENST00000488848 OBSCN-AS1Q96MR7 158 aa6.48□□□□□ -1.37
USP11-209ENST00000488848 HIGD2AQ9BW72 106 aa6.48□□□□□ -1.37
USP11-209ENST00000488848 ZNF706Q9Y5V0 76 aaPredicted RBP6.48□□□□□ -1.37
USP11-209ENST00000488848 TEX49A0A1B0GTD5 131 aa6.47□□□□□ -1.37
USP11-209ENST00000488848 BAALC-AS2P0C853 105 aa6.47□□□□□ -1.37
USP11-209ENST00000488848 RPL37AP61513 92 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms