RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 M0R378 163 aa7.73□□□□□ -1.17
HLA-DOB-209ENST00000488325 C9orf129Q5T035 196 aaKnown RBP7.73□□□□□ -1.17
HLA-DOB-209ENST00000488325 NKAPP1Q8N9T2 125 aa7.73□□□□□ -1.17
HLA-DOB-209ENST00000488325 TRBV20-1A0A075B6N2 111 aa7.72□□□□□ -1.17
HLA-DOB-209ENST00000488325 TRIAP1O43715 76 aa7.72□□□□□ -1.17
HLA-DOB-209ENST00000488325 FUSP35637 526 aaKnown RBP eCLIP7.72□□□□□ -1.17
HLA-DOB-209ENST00000488325 RPL28P46779 137 aaKnown RBP7.72□□□□□ -1.17
HLA-DOB-209ENST00000488325 IGLV5-37A0A075B6J1 123 aa7.71□□□□□ -1.18
HLA-DOB-209ENST00000488325 PRR3P79522 188 aaKnown RBP7.71□□□□□ -1.18
HLA-DOB-209ENST00000488325 Q8NDZ9 215 aa7.71□□□□□ -1.18
HLA-DOB-209ENST00000488325 LINC00474Q9P2X8 69 aa7.71□□□□□ -1.18
HLA-DOB-209ENST00000488325 UBE2V1Q13404 147 aa7.7□□□□□ -1.18
HLA-DOB-209ENST00000488325 SMIM11BQ8TCY0 68 aa7.7□□□□□ -1.18
HLA-DOB-209ENST00000488325 A0A096LNI7 61 aa7.69□□□□□ -1.18
HLA-DOB-209ENST00000488325 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
HLA-DOB-209ENST00000488325 LRP1Q07954 4544 aaKnown RBP7.69□□□□□ -1.18
HLA-DOB-209ENST00000488325 IGLV5-52A0A0A0MRZ9 124 aa7.68□□□□□ -1.18
HLA-DOB-209ENST00000488325 IGKV2-24A0A0C4DH68 120 aa7.68□□□□□ -1.18
HLA-DOB-209ENST00000488325 H0YGX0 51 aa7.68□□□□□ -1.18
HLA-DOB-209ENST00000488325 KRTAP10-1P60331 282 aa7.68□□□□□ -1.18
HLA-DOB-209ENST00000488325 ATXN8Q156A1 80 aa7.68□□□□□ -1.18
HLA-DOB-209ENST00000488325 TRBV10-3A0A0K0K1G6 114 aa7.67□□□□□ -1.18
HLA-DOB-209ENST00000488325 TCL1BO95988 128 aa7.67□□□□□ -1.18
HLA-DOB-209ENST00000488325 HAMPP81172 84 aa7.67□□□□□ -1.18
HLA-DOB-209ENST00000488325 SDIM1Q6ZPB5 146 aa7.67□□□□□ -1.18
HLA-DOB-209ENST00000488325 LINC00528Q8N1L1 170 aa7.67□□□□□ -1.18
HLA-DOB-209ENST00000488325 TRAV23DV6A0A075B6W5 121 aa7.66□□□□□ -1.18
HLA-DOB-209ENST00000488325 FAM19A5Q7Z5A7 132 aaPredicted RBP7.66□□□□□ -1.18
HLA-DOB-209ENST00000488325 C7orf33Q8WU49 177 aa7.65□□□□□ -1.18
HLA-DOB-209ENST00000488325 DIRC1Q969H9 104 aa7.65□□□□□ -1.18
HLA-DOB-209ENST00000488325 C22orf24Q9Y442 160 aa7.65□□□□□ -1.18
HLA-DOB-209ENST00000488325 LRP2P98164 4655 aa7.65□□□□□ -1.19
HLA-DOB-209ENST00000488325 FAM168BA1KXE4 195 aa7.64□□□□□ -1.19
HLA-DOB-209ENST00000488325 LST1O00453 97 aa7.64□□□□□ -1.19
HLA-DOB-209ENST00000488325 SNCGO76070 127 aa7.64□□□□□ -1.19
HLA-DOB-209ENST00000488325 C6orf99Q4VX62 202 aa7.64□□□□□ -1.19
HLA-DOB-209ENST00000488325 MRPL55Q7Z7F7 128 aaKnown RBP7.64□□□□□ -1.19
HLA-DOB-209ENST00000488325 H3BMG7 143 aa7.63□□□□□ -1.19
HLA-DOB-209ENST00000488325 M0QXV9 152 aa7.63□□□□□ -1.19
HLA-DOB-209ENST00000488325 PRYO14603 147 aa7.63□□□□□ -1.19
HLA-DOB-209ENST00000488325 CLEC2BQ92478 149 aa7.63□□□□□ -1.19
HLA-DOB-209ENST00000488325 TRBV7-6A0A0J9YX20 115 aa7.62□□□□□ -1.19
HLA-DOB-209ENST00000488325 A0A1B0GX51 115 aa7.62□□□□□ -1.19
HLA-DOB-209ENST00000488325 ZNF73O43830 326 aaPredicted RBP7.62□□□□□ -1.19
HLA-DOB-209ENST00000488325 TRACP01848 142 aa7.62□□□□□ -1.19
HLA-DOB-209ENST00000488325 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
HLA-DOB-209ENST00000488325 LINC01620Q4KN68 170 aa7.62□□□□□ -1.19
HLA-DOB-209ENST00000488325 DPH3Q96FX2 82 aa7.62□□□□□ -1.19
HLA-DOB-209ENST00000488325 LINC00167Q96N53 147 aa7.62□□□□□ -1.19
HLA-DOB-209ENST00000488325 KRTAP9-2Q9BYQ4 174 aa7.62□□□□□ -1.19
HLA-DOB-209ENST00000488325 KCNQ1DNQ9H478 68 aa7.62□□□□□ -1.19
HLA-DOB-209ENST00000488325 A0A1W2PNN7 141 aa7.61□□□□□ -1.19
HLA-DOB-209ENST00000488325 KRTAP7-1Q8IUC3 87 aa7.61□□□□□ -1.19
HLA-DOB-209ENST00000488325 SPACA4Q8TDM5 124 aa7.61□□□□□ -1.19
HLA-DOB-209ENST00000488325 IGLV1-50A0A075B6I6 118 aa7.6□□□□□ -1.19
HLA-DOB-209ENST00000488325 F8W1H4 67 aa7.6□□□□□ -1.19
HLA-DOB-209ENST00000488325 DNAL4O96015 105 aa7.6□□□□□ -1.19
HLA-DOB-209ENST00000488325 COX7BP24311 80 aa7.6□□□□□ -1.19
HLA-DOB-209ENST00000488325 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
HLA-DOB-209ENST00000488325 PLA2G1BP04054 148 aaKnown RBP7.59□□□□□ -1.19
HLA-DOB-209ENST00000488325 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
HLA-DOB-209ENST00000488325 KRTAP9-6A0A140TA67 174 aa7.58□□□□□ -1.2
HLA-DOB-209ENST00000488325 RPL37AP8A6NKH3 93 aa7.58□□□□□ -1.2
HLA-DOB-209ENST00000488325 C9JAW5 83 aa7.58□□□□□ -1.2
HLA-DOB-209ENST00000488325 SLC25A20O43772 301 aa7.58□□□□□ -1.2
HLA-DOB-209ENST00000488325 FAM218AQ96MZ4 157 aa7.58□□□□□ -1.2
HLA-DOB-209ENST00000488325 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.58□□□□□ -1.2
HLA-DOB-209ENST00000488325 ETDCA0A1B0GVM5 59 aa7.57□□□□□ -1.2
HLA-DOB-209ENST00000488325 OXTP01178 125 aa7.57□□□□□ -1.2
HLA-DOB-209ENST00000488325 ELOF1P60002 83 aaKnown RBP7.57□□□□□ -1.2
HLA-DOB-209ENST00000488325 UBE2BP63146 152 aa7.57□□□□□ -1.2
HLA-DOB-209ENST00000488325 LINC00575Q6W349 94 aa7.57□□□□□ -1.2
HLA-DOB-209ENST00000488325 A0A087WYN8 130 aa7.56□□□□□ -1.2
HLA-DOB-209ENST00000488325 H3BT86 120 aa7.56□□□□□ -1.2
HLA-DOB-209ENST00000488325 SPRR1AP35321 89 aa7.56□□□□□ -1.2
HLA-DOB-209ENST00000488325 REG3GQ6UW15 175 aa7.56□□□□□ -1.2
HLA-DOB-209ENST00000488325 PRO0461Q9UI25 63 aa7.56□□□□□ -1.2
HLA-DOB-209ENST00000488325 hADV29S1A0JD25 119 aa7.55□□□□□ -1.2
HLA-DOB-209ENST00000488325 PANO1I0J062 215 aa7.55□□□□□ -1.2
HLA-DOB-209ENST00000488325 PHF5AQ7RTV0 110 aaKnown RBP7.55□□□□□ -1.2
HLA-DOB-209ENST00000488325 MTURNQ8N3F0 131 aa7.55□□□□□ -1.2
HLA-DOB-209ENST00000488325 PLAC8Q9NZF1 115 aa7.55□□□□□ -1.2
HLA-DOB-209ENST00000488325 PKHD1L1Q86WI1 4243 aa7.54□□□□□ -1.2
HLA-DOB-209ENST00000488325 ANKRD29Q8N6D5 301 aa7.54□□□□□ -1.2
HLA-DOB-209ENST00000488325 H3BQ85 93 aa7.53□□□□□ -1.2
HLA-DOB-209ENST00000488325 GHRHP01286 108 aa7.53□□□□□ -1.2
HLA-DOB-209ENST00000488325 B5MCH6 92 aa7.52□□□□□ -1.21
HLA-DOB-209ENST00000488325 Q6ZRX8 168 aa7.52□□□□□ -1.21
HLA-DOB-209ENST00000488325 LINC01600Q96MT4 127 aa7.52□□□□□ -1.21
HLA-DOB-209ENST00000488325 ORMDL1Q9P0S3 153 aa7.52□□□□□ -1.21
HLA-DOB-209ENST00000488325 DHRS4-AS1Q9P1J3 65 aa7.52□□□□□ -1.21
HLA-DOB-209ENST00000488325 KRTAP4-16G5E9R7 235 aaPredicted RBP7.51□□□□□ -1.21
HLA-DOB-209ENST00000488325 BAALC-AS2P0C853 105 aa7.51□□□□□ -1.21
HLA-DOB-209ENST00000488325 OCIAD2Q56VL3 154 aa7.51□□□□□ -1.21
HLA-DOB-209ENST00000488325 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.51□□□□□ -1.21
HLA-DOB-209ENST00000488325 FAM19A1Q7Z5A9 133 aa7.5□□□□□ -1.21
HLA-DOB-209ENST00000488325 TEN1Q86WV5 123 aa7.49□□□□□ -1.21
HLA-DOB-209ENST00000488325 TMEM256-PLSCR3K7ERE1 68 aa7.48□□□□□ -1.21
HLA-DOB-209ENST00000488325 Q6ZSA8 131 aa7.48□□□□□ -1.21
HLA-DOB-209ENST00000488325 FAM30AQ9NZY2 134 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms