RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 HIGD2AQ9BW72 106 aa6.6□□□□□ -1.35
NIPAL3-207ENST00000488155 TTTY13Q9BZ97 58 aa6.6□□□□□ -1.35
NIPAL3-207ENST00000488155 NDUFA12Q9UI09 145 aa6.6□□□□□ -1.35
NIPAL3-207ENST00000488155 DLEU1O43261 78 aa6.59□□□□□ -1.35
NIPAL3-207ENST00000488155 TSPEAR-AS2P59090 65 aa6.59□□□□□ -1.35
NIPAL3-207ENST00000488155 FAM229BQ4G0N7 80 aa6.59□□□□□ -1.35
NIPAL3-207ENST00000488155 SCGB1D4Q6XE38 83 aa6.59□□□□□ -1.35
NIPAL3-207ENST00000488155 LINC00304Q8N9R0 145 aa6.59□□□□□ -1.35
NIPAL3-207ENST00000488155 NCR3O14931 201 aa6.58□□□□□ -1.36
NIPAL3-207ENST00000488155 C3orf22Q8N5N4 141 aa6.58□□□□□ -1.36
NIPAL3-207ENST00000488155 MIR7-3HGQ8N6C7 128 aa6.58□□□□□ -1.36
NIPAL3-207ENST00000488155 DDTP30046 118 aa6.56□□□□□ -1.36
NIPAL3-207ENST00000488155 HERV-K104P63124 156 aa6.56□□□□□ -1.36
NIPAL3-207ENST00000488155 MUC2Q02817 5179 aa6.55□□□□□ -1.36
NIPAL3-207ENST00000488155 A0A0J9YXY3 114 aa6.54□□□□□ -1.36
NIPAL3-207ENST00000488155 LINC00587B1AMM8 73 aa6.54□□□□□ -1.36
NIPAL3-207ENST00000488155 DAND5Q8N907 189 aa6.54□□□□□ -1.36
NIPAL3-207ENST00000488155 HIGD1BQ9P298 99 aa6.54□□□□□ -1.36
NIPAL3-207ENST00000488155 PRYO14603 147 aa6.53□□□□□ -1.36
NIPAL3-207ENST00000488155 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
NIPAL3-207ENST00000488155 HIST1H4GQ99525 98 aa6.53□□□□□ -1.36
NIPAL3-207ENST00000488155 PPDPFQ9H3Y8 114 aa6.53□□□□□ -1.36
NIPAL3-207ENST00000488155 TRBV10-3A0A0K0K1G6 114 aa6.52□□□□□ -1.37
NIPAL3-207ENST00000488155 C2orf91Q6ZV80 131 aa6.52□□□□□ -1.37
NIPAL3-207ENST00000488155 SMCR5Q8TEV8 140 aa6.52□□□□□ -1.37
NIPAL3-207ENST00000488155 ETDCA0A1B0GVM5 59 aa6.51□□□□□ -1.37
NIPAL3-207ENST00000488155 TIMM17BO60830 172 aa6.51□□□□□ -1.37
NIPAL3-207ENST00000488155 IGLV7-46A0A075B6I9 117 aa6.5□□□□□ -1.37
NIPAL3-207ENST00000488155 SPRR1AP35321 89 aa6.5□□□□□ -1.37
NIPAL3-207ENST00000488155 HSD52Q0P140 79 aa6.5□□□□□ -1.37
NIPAL3-207ENST00000488155 TAL2Q16559 108 aa6.5□□□□□ -1.37
NIPAL3-207ENST00000488155 KCNQ1DNQ9H478 68 aa6.5□□□□□ -1.37
NIPAL3-207ENST00000488155 M0R143 59 aa6.49□□□□□ -1.37
NIPAL3-207ENST00000488155 LINC00337Q8N6G1 96 aa6.49□□□□□ -1.37
NIPAL3-207ENST00000488155 CDIP1Q9H305 208 aa6.49□□□□□ -1.37
NIPAL3-207ENST00000488155 SPANXB1Q9NS25 103 aaPredicted RBP6.49□□□□□ -1.37
NIPAL3-207ENST00000488155 ZNF706Q9Y5V0 76 aaPredicted RBP6.49□□□□□ -1.37
NIPAL3-207ENST00000488155 KRTAP4-16G5E9R7 235 aaPredicted RBP6.48□□□□□ -1.37
NIPAL3-207ENST00000488155 HINT1P49773 126 aaPredicted RBP6.48□□□□□ -1.37
NIPAL3-207ENST00000488155 NPC2P61916 151 aa6.48□□□□□ -1.37
NIPAL3-207ENST00000488155 BATFQ16520 125 aa6.48□□□□□ -1.37
NIPAL3-207ENST00000488155 ADAMTSL4-AS1Q5T5F5 129 aa6.48□□□□□ -1.37
NIPAL3-207ENST00000488155 GAGE2AQ6NT46 116 aa6.48□□□□□ -1.37
NIPAL3-207ENST00000488155 Q6ZVH6 145 aa6.48□□□□□ -1.37
NIPAL3-207ENST00000488155 COPS9Q8WXC6 57 aa6.48□□□□□ -1.37
NIPAL3-207ENST00000488155 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
NIPAL3-207ENST00000488155 MUSTN1Q8IVN3 82 aa6.47□□□□□ -1.37
NIPAL3-207ENST00000488155 CEND1Q8N111 149 aa6.47□□□□□ -1.37
NIPAL3-207ENST00000488155 Q8NBF4 154 aa6.47□□□□□ -1.37
NIPAL3-207ENST00000488155 SPANXDQ9BXN6 97 aa6.47□□□□□ -1.37
NIPAL3-207ENST00000488155 SPANXCQ9NY87 97 aa6.47□□□□□ -1.37
NIPAL3-207ENST00000488155 B5MCH6 92 aa6.46□□□□□ -1.38
NIPAL3-207ENST00000488155 ERC2-IT1O76042 136 aa6.46□□□□□ -1.38
NIPAL3-207ENST00000488155 IFITM1P13164 125 aa6.46□□□□□ -1.38
NIPAL3-207ENST00000488155 LITAFQ99732 161 aa6.46□□□□□ -1.38
NIPAL3-207ENST00000488155 IGLV9-49A0A0B4J1Y8 123 aa6.45□□□□□ -1.38
NIPAL3-207ENST00000488155 BVES-AS1Q5T3Y7 98 aa6.45□□□□□ -1.38
NIPAL3-207ENST00000488155 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
NIPAL3-207ENST00000488155 SPAG11AQ6PDA7 123 aa6.45□□□□□ -1.38
NIPAL3-207ENST00000488155 LOC107984156A0A0G2JMH3 177 aa6.44□□□□□ -1.38
NIPAL3-207ENST00000488155 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
NIPAL3-207ENST00000488155 TPRXLQ17RH7 258 aa6.44□□□□□ -1.38
NIPAL3-207ENST00000488155 S100A7L2Q5SY68 101 aa6.44□□□□□ -1.38
NIPAL3-207ENST00000488155 SOSTDC1Q6X4U4 206 aa6.44□□□□□ -1.38
NIPAL3-207ENST00000488155 ARL17AQ8IVW1 177 aa6.44□□□□□ -1.38
NIPAL3-207ENST00000488155 LINC00308Q8TCZ7 52 aa6.44□□□□□ -1.38
NIPAL3-207ENST00000488155 Q9BRP9 147 aa6.44□□□□□ -1.38
NIPAL3-207ENST00000488155 TRBV10-2A0A0K0K1G8 114 aa6.43□□□□□ -1.38
NIPAL3-207ENST00000488155 A0A0U1RQV1 116 aa6.43□□□□□ -1.38
NIPAL3-207ENST00000488155 A6NDN8 102 aa6.43□□□□□ -1.38
NIPAL3-207ENST00000488155 MOBPQ13875 183 aa6.43□□□□□ -1.38
NIPAL3-207ENST00000488155 FAT4Q6V0I7 4981 aa6.42□□□□□ -1.38
NIPAL3-207ENST00000488155 FXYD2P54710 66 aa6.42□□□□□ -1.38
NIPAL3-207ENST00000488155 LINC00483Q53H64 154 aa6.42□□□□□ -1.38
NIPAL3-207ENST00000488155 SNHG12Q9BXW3 62 aa6.42□□□□□ -1.38
NIPAL3-207ENST00000488155 IGLV6-57P01721 117 aa6.41□□□□□ -1.38
NIPAL3-207ENST00000488155 Q6ZRX8 168 aa6.41□□□□□ -1.38
NIPAL3-207ENST00000488155 RAB37Q96AX2 223 aa6.41□□□□□ -1.38
NIPAL3-207ENST00000488155 NHP2Q9NX24 153 aaKnown RBP6.41□□□□□ -1.38
NIPAL3-207ENST00000488155 TRAV23DV6A0A075B6W5 121 aa6.4□□□□□ -1.38
NIPAL3-207ENST00000488155 NDUFC2O95298 119 aa6.4□□□□□ -1.38
NIPAL3-207ENST00000488155 SPINK1P00995 79 aa6.39□□□□□ -1.39
NIPAL3-207ENST00000488155 COL5A1-AS1Q5SY13 56 aa6.39□□□□□ -1.39
NIPAL3-207ENST00000488155 ST20-AS1Q8NBB2 130 aa6.39□□□□□ -1.39
NIPAL3-207ENST00000488155 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
NIPAL3-207ENST00000488155 CFC1BP0CG36 223 aa6.38□□□□□ -1.39
NIPAL3-207ENST00000488155 CFC1P0CG37 223 aa6.38□□□□□ -1.39
NIPAL3-207ENST00000488155 C9orf153Q5TBE3 101 aa6.38□□□□□ -1.39
NIPAL3-207ENST00000488155 FP248Q71RG6 208 aaPredicted RBP6.38□□□□□ -1.39
NIPAL3-207ENST00000488155 OR13C6PQ8NH95 151 aa6.38□□□□□ -1.39
NIPAL3-207ENST00000488155 SSBP3-AS1Q7Z2R9 100 aa6.37□□□□□ -1.39
NIPAL3-207ENST00000488155 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
NIPAL3-207ENST00000488155 A0A1B0GV90 55 aa6.36□□□□□ -1.39
NIPAL3-207ENST00000488155 K7ERJ3 54 aa6.36□□□□□ -1.39
NIPAL3-207ENST00000488155 KRTAP13-3Q3SY46 172 aa6.36□□□□□ -1.39
NIPAL3-207ENST00000488155 PRO1854Q9UHT4 67 aa6.36□□□□□ -1.39
NIPAL3-207ENST00000488155 TRAV13-2A0A0B4J235 113 aa6.35□□□□□ -1.39
NIPAL3-207ENST00000488155 H7C2G1 150 aa6.35□□□□□ -1.39
NIPAL3-207ENST00000488155 Q1RN00 199 aa6.35□□□□□ -1.39
NIPAL3-207ENST00000488155 A0A1B0GWB2 263 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms