RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 S100A7L2Q5SY68 101 aa10.27□□□□□ -0.77
SHROOM1-205ENST00000488072 OR13C6PQ8NH95 151 aa10.26□□□□□ -0.77
SHROOM1-205ENST00000488072 KRTAP10-8P60410 259 aa10.25□□□□□ -0.77
SHROOM1-205ENST00000488072 HIGD2AQ9BW72 106 aa10.25□□□□□ -0.77
SHROOM1-205ENST00000488072 IFITM1P13164 125 aa10.24□□□□□ -0.77
SHROOM1-205ENST00000488072 C2orf91Q6ZV80 131 aa10.24□□□□□ -0.77
SHROOM1-205ENST00000488072 TRAV23DV6A0A075B6W5 121 aa10.23□□□□□ -0.77
SHROOM1-205ENST00000488072 ETDCA0A1B0GVM5 59 aa10.22□□□□□ -0.77
SHROOM1-205ENST00000488072 B5MCH6 92 aa10.22□□□□□ -0.77
SHROOM1-205ENST00000488072 DLEU1O43261 78 aa10.22□□□□□ -0.77
SHROOM1-205ENST00000488072 ERC2-IT1O76042 136 aa10.22□□□□□ -0.77
SHROOM1-205ENST00000488072 A4D1N5 150 aa10.21□□□□□ -0.77
SHROOM1-205ENST00000488072 Q6ZVH6 145 aa10.21□□□□□ -0.77
SHROOM1-205ENST00000488072 SMCR5Q8TEV8 140 aa10.21□□□□□ -0.77
SHROOM1-205ENST00000488072 C12orf57Q99622 126 aa10.21□□□□□ -0.77
SHROOM1-205ENST00000488072 A0A087X002 238 aa10.2□□□□□ -0.78
SHROOM1-205ENST00000488072 SLC25A34Q6PIV7 304 aa10.2□□□□□ -0.78
SHROOM1-205ENST00000488072 Q9BRP9 147 aa10.2□□□□□ -0.78
SHROOM1-205ENST00000488072 ZNF73O43830 326 aaPredicted RBP10.19□□□□□ -0.78
SHROOM1-205ENST00000488072 HIST1H4GQ99525 98 aa10.19□□□□□ -0.78
SHROOM1-205ENST00000488072 A6NDN8 102 aa10.18□□□□□ -0.78
SHROOM1-205ENST00000488072 LINC00518Q8N0U6 118 aa10.17□□□□□ -0.78
SHROOM1-205ENST00000488072 PPDPFQ9H3Y8 114 aa10.16□□□□□ -0.78
SHROOM1-205ENST00000488072 KRTAP13-2Q52LG2 175 aa10.15□□□□□ -0.78
SHROOM1-205ENST00000488072 Q6ZRX8 168 aa10.15□□□□□ -0.78
SHROOM1-205ENST00000488072 S100A12P80511 92 aa10.14□□□□□ -0.79
SHROOM1-205ENST00000488072 C6orf99Q4VX62 202 aa10.14□□□□□ -0.79
SHROOM1-205ENST00000488072 COPS9Q8WXC6 57 aa10.14□□□□□ -0.79
SHROOM1-205ENST00000488072 SPRR4Q96PI1 79 aa10.14□□□□□ -0.79
SHROOM1-205ENST00000488072 HIGD1BQ9P298 99 aa10.14□□□□□ -0.79
SHROOM1-205ENST00000488072 LOC105371267A0A1B0GV96 52 aa10.13□□□□□ -0.79
SHROOM1-205ENST00000488072 ST20-AS1Q8NBB2 130 aa10.13□□□□□ -0.79
SHROOM1-205ENST00000488072 SMIM11BQ8TCY0 68 aa10.12□□□□□ -0.79
SHROOM1-205ENST00000488072 PRO1933Q9H354 126 aa10.12□□□□□ -0.79
SHROOM1-205ENST00000488072 C3orf22Q8N5N4 141 aa10.11□□□□□ -0.79
SHROOM1-205ENST00000488072 TRAV13-2A0A0B4J235 113 aa10.09□□□□□ -0.79
SHROOM1-205ENST00000488072 CFC1BP0CG36 223 aa10.09□□□□□ -0.79
SHROOM1-205ENST00000488072 CFC1P0CG37 223 aa10.09□□□□□ -0.79
SHROOM1-205ENST00000488072 COX7BP24311 80 aa10.09□□□□□ -0.79
SHROOM1-205ENST00000488072 FXYD2P54710 66 aa10.09□□□□□ -0.79
SHROOM1-205ENST00000488072 GAGE2AQ6NT46 116 aa10.09□□□□□ -0.79
SHROOM1-205ENST00000488072 RPL13AP40429 203 aaKnown RBP10.08□□□□□ -0.8
SHROOM1-205ENST00000488072 CRYGAP11844 174 aa10.07□□□□□ -0.8
SHROOM1-205ENST00000488072 ELOF1P60002 83 aaKnown RBP10.07□□□□□ -0.8
SHROOM1-205ENST00000488072 CEND1Q8N111 149 aa10.07□□□□□ -0.8
SHROOM1-205ENST00000488072 H7C2G1 150 aa10.06□□□□□ -0.8
SHROOM1-205ENST00000488072 TYMSOSQ8TAI1 123 aa10.05□□□□□ -0.8
SHROOM1-205ENST00000488072 UQCR10Q9UDW1 63 aa10.05□□□□□ -0.8
SHROOM1-205ENST00000488072 HMCN2Q8NDA2 5059 aa10.04□□□□□ -0.8
SHROOM1-205ENST00000488072 HINT1P49773 126 aaPredicted RBP10.04□□□□□ -0.8
SHROOM1-205ENST00000488072 FAM229BQ4G0N7 80 aa10.04□□□□□ -0.8
SHROOM1-205ENST00000488072 TAL2Q16559 108 aa10.02□□□□□ -0.81
SHROOM1-205ENST00000488072 LINC00483Q53H64 154 aa10.02□□□□□ -0.81
SHROOM1-205ENST00000488072 CBY1Q9Y3M2 126 aa10.02□□□□□ -0.81
SHROOM1-205ENST00000488072 K7ERJ3 54 aa10.01□□□□□ -0.81
SHROOM1-205ENST00000488072 TSPAN13O95857 204 aa10.01□□□□□ -0.81
SHROOM1-205ENST00000488072 ZNF706Q9Y5V0 76 aaPredicted RBP10.01□□□□□ -0.81
SHROOM1-205ENST00000488072 SMIM6P0DI80 62 aa10□□□□□ -0.81
SHROOM1-205ENST00000488072 HSD52Q0P140 79 aa10□□□□□ -0.81
SHROOM1-205ENST00000488072 RAB37Q96AX2 223 aa10□□□□□ -0.81
SHROOM1-205ENST00000488072 TRBV7-6A0A0J9YX20 115 aa9.99□□□□□ -0.81
SHROOM1-205ENST00000488072 A0A1B0GWB2 263 aa9.99□□□□□ -0.81
SHROOM1-205ENST00000488072 DEFB105AQ8NG35 78 aa9.99□□□□□ -0.81
SHROOM1-205ENST00000488072 DHRS4-AS1Q9P1J3 65 aa9.99□□□□□ -0.81
SHROOM1-205ENST00000488072 IGLV9-49A0A0B4J1Y8 123 aa9.98□□□□□ -0.81
SHROOM1-205ENST00000488072 A0A0B4J2C4 111 aa9.98□□□□□ -0.81
SHROOM1-205ENST00000488072 LINC01547P58512 204 aaPredicted RBP9.96□□□□□ -0.82
SHROOM1-205ENST00000488072 NHP2Q9NX24 153 aaKnown RBP9.96□□□□□ -0.82
SHROOM1-205ENST00000488072 MOBPQ13875 183 aa9.95□□□□□ -0.82
SHROOM1-205ENST00000488072 BVES-AS1Q5T3Y7 98 aa9.94□□□□□ -0.82
SHROOM1-205ENST00000488072 LINC00575Q6W349 94 aa9.94□□□□□ -0.82
SHROOM1-205ENST00000488072 CTAG1AP78358 180 aa9.93□□□□□ -0.82
SHROOM1-205ENST00000488072 LINC00304Q8N9R0 145 aa9.93□□□□□ -0.82
SHROOM1-205ENST00000488072 Q8NBF4 154 aa9.93□□□□□ -0.82
SHROOM1-205ENST00000488072 PRO1854Q9UHT4 67 aa9.93□□□□□ -0.82
SHROOM1-205ENST00000488072 SPRR1BP22528 89 aa9.92□□□□□ -0.82
SHROOM1-205ENST00000488072 FAM218AQ96MZ4 157 aa9.92□□□□□ -0.82
SHROOM1-205ENST00000488072 Q1RN00 199 aa9.91□□□□□ -0.82
SHROOM1-205ENST00000488072 SMIM29Q86T20 159 aa9.91□□□□□ -0.82
SHROOM1-205ENST00000488072 TMEM238LA0A1B0GVL6 79 aa9.9□□□□□ -0.82
SHROOM1-205ENST00000488072 A6NJY4 79 aa9.9□□□□□ -0.82
SHROOM1-205ENST00000488072 VAMP3Q15836 100 aa9.9□□□□□ -0.82
SHROOM1-205ENST00000488072 A0A0G2JQZ4 141 aa9.89□□□□□ -0.83
SHROOM1-205ENST00000488072 C9orf153Q5TBE3 101 aa9.89□□□□□ -0.83
SHROOM1-205ENST00000488072 Q8N377 158 aa9.89□□□□□ -0.83
SHROOM1-205ENST00000488072 hADV29S1A0JD25 119 aa9.88□□□□□ -0.83
SHROOM1-205ENST00000488072 TRIAP1O43715 76 aa9.88□□□□□ -0.83
SHROOM1-205ENST00000488072 RETNLBQ9BQ08 111 aa9.88□□□□□ -0.83
SHROOM1-205ENST00000488072 IGLV5-48A0A075B6I7 105 aa9.87□□□□□ -0.83
SHROOM1-205ENST00000488072 Q6ZQY7 126 aa9.87□□□□□ -0.83
SHROOM1-205ENST00000488072 TEX49A0A1B0GTD5 131 aa9.86□□□□□ -0.83
SHROOM1-205ENST00000488072 SLC25A20O43772 301 aa9.85□□□□□ -0.83
SHROOM1-205ENST00000488072 LPAP08519 4548 aa9.85□□□□□ -0.83
SHROOM1-205ENST00000488072 CLEC2BQ92478 149 aa9.84□□□□□ -0.83
SHROOM1-205ENST00000488072 LAMTOR3Q9UHA4 124 aa9.83□□□□□ -0.84
SHROOM1-205ENST00000488072 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
SHROOM1-205ENST00000488072 SSBP3-AS1Q7Z2R9 100 aa9.82□□□□□ -0.84
SHROOM1-205ENST00000488072 NAA38Q9BRA0 125 aaKnown RBP9.81□□□□□ -0.84
SHROOM1-205ENST00000488072 TSTD3H0UI37 97 aa9.8□□□□□ -0.84
SHROOM1-205ENST00000488072 PSMB2P49721 201 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms