RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 SERF2P84101 59 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 DPPA3Q6W0C5 159 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 Q6ZRN7 208 aaPredicted RBP1.95□□□□□ -2.1
GPNMB-212ENST00000487890 PHF5AQ7RTV0 110 aaKnown RBP1.95□□□□□ -2.1
GPNMB-212ENST00000487890 Q86TA4 180 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 AMN1Q8IY45 258 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 ATP6V0E2Q8NHE4 81 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 FAM213BQ8TBF2 198 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 RAB37Q96AX2 223 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 PHLDA3Q9Y5J5 127 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 ARL2-SNX15V9GYD0 113 aa1.95□□□□□ -2.1
GPNMB-212ENST00000487890 MUC21A0A140T8X8 626 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 TRBV6-4A0A1B0GX49 114 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 KANTRA0A1W2PQU2 76 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 A8MUU9 505 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 A8MWP4 228 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 SMR3BP02814 79 aaPredicted RBP1.94□□□□□ -2.1
GPNMB-212ENST00000487890 ARMS2P0C7Q2 107 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 IGLC3P0DOY3 106 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 RNASE3P12724 160 aaKnown RBP1.94□□□□□ -2.1
GPNMB-212ENST00000487890 KRTAP10-1P60331 282 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 KRTAP10-6P60371 365 aaPredicted RBP1.94□□□□□ -2.1
GPNMB-212ENST00000487890 MOBPQ13875 183 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 ZNF56Q15929 161 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 LINC01556Q5JQF7 62 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 LELP1Q5T871 98 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 Q5VSD8 79 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 PMCHL2Q9BQD1 86 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 SPANXDQ9BXN6 97 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 SPCS1Q9Y6A9 102 aa1.94□□□□□ -2.1
GPNMB-212ENST00000487890 A0A087WWC5 75 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 IBA57-AS1B1ANH7 110 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 F8W1H4 67 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 K7ERS5 55 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 LEPROTO15243 131 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 MGPP08493 103 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 COX7CP15954 63 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 ADIRFQ15847 76 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 BVES-AS1Q5T3Y7 98 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 SPANXN1Q5VSR9 72 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 LINC01545Q5VT33 79 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 CLPSL2Q6UWE3 100 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 COPS9Q8WXC6 57 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 DIRC1Q969H9 104 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 UBE2WQ96B02 151 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 RMI2Q96E14 147 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 ST20Q9HBF5 79 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 OSTCQ9NRP0 149 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 GNG13Q9P2W3 67 aa1.93□□□□□ -2.1
GPNMB-212ENST00000487890 IGLV4-60A0A075B6I1 120 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 TRBV7-3A0A075B6L6 115 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 hADV29S1A0JD25 119 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 LRCOL1A6NCL2 159 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 UMAD1C9J7I0 102 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 TIMM17BO60830 172 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 CRPP02741 224 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 ANGP03950 147 aaKnown RBP1.92□□□□□ -2.1
GPNMB-212ENST00000487890 IGLV7-43P04211 117 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 KRTAP10-5P60370 271 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 CIRBPQ14011 172 aaKnown RBP1.92□□□□□ -2.1
GPNMB-212ENST00000487890 WFDC2Q14508 124 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 ELOBQ15370 118 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 SPATA45Q537H7 98 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 BAGE2Q86Y30 109 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 Q8N814 137 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 OR10AG1Q8NH19 301 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 TSKUQ8WUA8 353 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 LINC00167Q96N53 147 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 DPH3P1Q9H4G8 78 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 HERC1Q15751 4861 aa1.92□□□□□ -2.1
GPNMB-212ENST00000487890 PKHD1L1Q86WI1 4243 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.91□□□□□ -2.1
GPNMB-212ENST00000487890 TRBV10-1A0A0K0K1A3 114 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 A0A1W2PPM0 123 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 H3BRM9 83 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 NUPR1O60356 82 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 CRIP1P50238 77 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 UBE2D3P61077 147 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 UBE2D2P62837 147 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 ZNF345Q14585 488 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 DEFB104AQ8WTQ1 72 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 MANBALQ9NQG1 85 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 CYTL1Q9NRR1 136 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 FAT1Q14517 4588 aa1.91□□□□□ -2.1
GPNMB-212ENST00000487890 IGLV10-54A0A075B6I4 117 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 TRBV25-1A0A075B6N4 114 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 TRBV6-8A0A0A6YYG3 113 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 IGHV1-24A0A0C4DH33 117 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 IGKV3OR2-268A0A0C4DH90 116 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 TRBV6-1A0A0K0K1D8 114 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 C7orf77A4D0Y5 90 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 A6NN06 94 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 HMSDA8MTL9 139 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 H3BUT2 72 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 IGKCP01834 107 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 TSPEAR-AS2P59090 65 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 SEC11AP67812 179 aa1.9□□□□□ -2.11
GPNMB-212ENST00000487890 RBM3P98179 157 aaKnown RBP1.9□□□□□ -2.11
GPNMB-212ENST00000487890 ETDBQ3ZM63 59 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms