RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 MRPL35Q9NZE8 188 aaKnown RBP2.32□□□□□ -2.04
BRCA1-217ENST00000487825 NDUFA12Q9UI09 145 aa2.32□□□□□ -2.04
BRCA1-217ENST00000487825 GRIFINA4D1Z8 144 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 LINC00862A6NCI5 91 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 ZNF73O43830 326 aaPredicted RBP2.31□□□□□ -2.04
BRCA1-217ENST00000487825 SCO1O75880 301 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 CST7O76096 145 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 TCRAP04437 139 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 AQP4P55087 323 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 TMEM241Q24JQ0 296 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 KHDC3LQ587J8 217 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 KRTAP13-1Q8IUC0 172 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 ORMDL3Q8N138 153 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 FAM19A2Q8N3H0 131 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 C3orf22Q8N5N4 141 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 SMIM4Q8WVI0 70 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 NKX6-2Q9C056 277 aaPredicted RBP2.31□□□□□ -2.04
BRCA1-217ENST00000487825 SMDT1Q9H4I9 107 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 NAT8Q9UHE5 227 aa2.31□□□□□ -2.04
BRCA1-217ENST00000487825 TMEM218A2RU14 115 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 M0QY20 66 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 TAX1BP3O14907 124 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 PLA2G10O15496 165 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 IGLC6P0CF74 106 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 NDUFA6P56556 154 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 CCL20P78556 96 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 SPAG11BQ08648 103 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 C5orf17Q8NAS9 161 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 AP1S3Q96PC3 154 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 TMEM191AQ9H0A3 160 aa2.3□□□□□ -2.04
BRCA1-217ENST00000487825 A8MWL6 223 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 G3V3Q6 166 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 M0R378 163 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 SPINK1P00995 79 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 MT-ND4LP03901 98 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 HIST1H2BOP23527 126 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 ATP6V0CP27449 155 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 HIST1H2BBP33778 126 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 CXCL5P42830 114 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 NMUP48645 174 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 CRIP1P50238 77 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 HIST1H2BDP58876 126 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 TAS2R45P59539 299 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 HIST1H2BCP62807 126 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 HIST2H2BEQ16778 126 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.29□□□□□ -2.04
BRCA1-217ENST00000487825 OR10AG1Q8NH19 301 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 HIST1H2BHQ93079 126 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 HIST1H2BNQ99877 126 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 HIST1H2BMQ99879 126 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 C8orf17Q9NRJ1 99 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 TP73-AS1Q9UF72 201 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 ARL2-SNX15V9GYD0 113 aa2.29□□□□□ -2.04
BRCA1-217ENST00000487825 TMSB15BA0A087X1C1 80 aa2.28□□□□□ -2.04
BRCA1-217ENST00000487825 BPY2O14599 106 aa2.28□□□□□ -2.04
BRCA1-217ENST00000487825 NDUFA1O15239 70 aa2.28□□□□□ -2.04
BRCA1-217ENST00000487825 SH2D1AO60880 128 aa2.28□□□□□ -2.04
BRCA1-217ENST00000487825 LGALS3P17931 250 aaKnown RBP2.28□□□□□ -2.04
BRCA1-217ENST00000487825 RPS29P62273 56 aaKnown RBP2.28□□□□□ -2.04
BRCA1-217ENST00000487825 LSM3P62310 102 aaKnown RBP2.28□□□□□ -2.04
BRCA1-217ENST00000487825 RNASE13Q5GAN3 156 aaKnown RBP2.28□□□□□ -2.04
BRCA1-217ENST00000487825 C9orf62Q8N4C0 152 aa2.28□□□□□ -2.04
BRCA1-217ENST00000487825 SNHG12Q9BXW3 62 aa2.28□□□□□ -2.04
BRCA1-217ENST00000487825 KRTAP2-1Q9BYU5 128 aa2.28□□□□□ -2.04
BRCA1-217ENST00000487825 C6orf48Q9UBA6 75 aa2.28□□□□□ -2.04
BRCA1-217ENST00000487825 C22orf24Q9Y442 160 aa2.28□□□□□ -2.04
BRCA1-217ENST00000487825 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-217ENST00000487825 IGKV2-29A2NJV5 120 aaPredicted RBP2.27□□□□□ -2.05
BRCA1-217ENST00000487825 S100A2P29034 98 aa2.27□□□□□ -2.05
BRCA1-217ENST00000487825 UBE2AP49459 152 aa2.27□□□□□ -2.05
BRCA1-217ENST00000487825 COL5A1-AS1Q5SY13 56 aa2.27□□□□□ -2.05
BRCA1-217ENST00000487825 Q86TA4 180 aa2.27□□□□□ -2.05
BRCA1-217ENST00000487825 SPANXDQ9BXN6 97 aa2.27□□□□□ -2.05
BRCA1-217ENST00000487825 A0A1B0GVX0 72 aa2.26□□□□□ -2.05
BRCA1-217ENST00000487825 MGPP08493 103 aa2.26□□□□□ -2.05
BRCA1-217ENST00000487825 CXCL1P09341 107 aa2.26□□□□□ -2.05
BRCA1-217ENST00000487825 FOXA3P55318 350 aaPredicted RBP2.26□□□□□ -2.05
BRCA1-217ENST00000487825 SPANXN1Q5VSR9 72 aa2.26□□□□□ -2.05
BRCA1-217ENST00000487825 UNQ6190/PRO20217Q6UXQ8 127 aa2.26□□□□□ -2.05
BRCA1-217ENST00000487825 GTF2H5Q6ZYL4 71 aa2.26□□□□□ -2.05
BRCA1-217ENST00000487825 DEDD2Q8WXF8 326 aa2.26□□□□□ -2.05
BRCA1-217ENST00000487825 EPDR1Q9UM22 224 aa2.26□□□□□ -2.05
BRCA1-217ENST00000487825 TRAV13-1A0A0B4J241 112 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 MUC21A0A140T8X8 626 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 ZNF727A8MUV8 499 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 C1orf196B1AJZ1 125 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 C17orf112F2Z3M2 114 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 TMEM256-PLSCR3K7ERE1 68 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 SLC25A20O43772 301 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 APCSP02743 223 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 FABP2P12104 132 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 FAUP35544 74 aaKnown RBP2.25□□□□□ -2.05
BRCA1-217ENST00000487825 HIST1H4AP62805 103 aaKnown RBP2.25□□□□□ -2.05
BRCA1-217ENST00000487825 HSD52Q0P140 79 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 MOBPQ13875 183 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 LINC01554Q52M75 96 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 MEIG1Q5JSS6 88 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 FAM104BQ5XKR9 115 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 C5orf38Q86SI9 138 aa2.25□□□□□ -2.05
BRCA1-217ENST00000487825 BRK1Q8WUW1 75 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms