RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 LINC00032P0C843 101 aa1.59□□□□□ -2.15
UBR3-211ENST00000487689 CBLN1P23435 193 aa1.59□□□□□ -2.15
UBR3-211ENST00000487689 ATP5EP56381 51 aaPredicted RBP1.59□□□□□ -2.15
UBR3-211ENST00000487689 IQCJQ1A5X6 159 aa1.59□□□□□ -2.15
UBR3-211ENST00000487689 DEFB135Q30KP9 77 aa1.59□□□□□ -2.15
UBR3-211ENST00000487689 C10orf55Q5SWW7 151 aa1.59□□□□□ -2.15
UBR3-211ENST00000487689 RPL7L1Q6DKI1 246 aaKnown RBP1.59□□□□□ -2.15
UBR3-211ENST00000487689 Q6ZRN7 208 aaPredicted RBP1.59□□□□□ -2.15
UBR3-211ENST00000487689 C4orf33Q8N1A6 199 aa1.59□□□□□ -2.15
UBR3-211ENST00000487689 DPY30Q9C005 99 aa1.59□□□□□ -2.15
UBR3-211ENST00000487689 Q9H521 79 aa1.59□□□□□ -2.15
UBR3-211ENST00000487689 KAAG1Q9UBP8 84 aa1.59□□□□□ -2.15
UBR3-211ENST00000487689 KLK9Q9UKQ9 250 aa1.59□□□□□ -2.15
UBR3-211ENST00000487689 SSSCA1O60232 199 aa1.58□□□□□ -2.16
UBR3-211ENST00000487689 MPC2O95563 127 aa1.58□□□□□ -2.16
UBR3-211ENST00000487689 SLC25A6P12236 298 aa1.58□□□□□ -2.16
UBR3-211ENST00000487689 C9orf116Q5BN46 136 aaPredicted RBP1.58□□□□□ -2.16
UBR3-211ENST00000487689 SLC48A1Q6P1K1 146 aa1.58□□□□□ -2.16
UBR3-211ENST00000487689 Q6ZSA8 131 aa1.58□□□□□ -2.16
UBR3-211ENST00000487689 C5orf38Q86SI9 138 aa1.58□□□□□ -2.16
UBR3-211ENST00000487689 UBE2DNLQ8IWF7 75 aa1.58□□□□□ -2.16
UBR3-211ENST00000487689 Q8N8P6 123 aa1.58□□□□□ -2.16
UBR3-211ENST00000487689 C22orf24Q9Y442 160 aa1.58□□□□□ -2.16
UBR3-211ENST00000487689 V9GYS6 101 aa1.58□□□□□ -2.16
UBR3-211ENST00000487689 UBE2L5PA0A1B0GUS4 154 aa1.57□□□□□ -2.16
UBR3-211ENST00000487689 TRBV6-4A0A1B0GX49 114 aa1.57□□□□□ -2.16
UBR3-211ENST00000487689 IGHV3-30P01768 117 aa1.57□□□□□ -2.16
UBR3-211ENST00000487689 IGHV3-30-5P0DP03 117 aa1.57□□□□□ -2.16
UBR3-211ENST00000487689 UBE2L3P68036 154 aaKnown RBP1.57□□□□□ -2.16
UBR3-211ENST00000487689 LYPD5Q6UWN5 251 aa1.57□□□□□ -2.16
UBR3-211ENST00000487689 COA5Q86WW8 74 aa1.57□□□□□ -2.16
UBR3-211ENST00000487689 DMAC1Q96GE9 116 aa1.57□□□□□ -2.16
UBR3-211ENST00000487689 KRTAP2-1Q9BYU5 128 aa1.57□□□□□ -2.16
UBR3-211ENST00000487689 DPH3P1Q9H4G8 78 aa1.57□□□□□ -2.16
UBR3-211ENST00000487689 TRBV10-1A0A0K0K1A3 114 aa1.56□□□□□ -2.16
UBR3-211ENST00000487689 DEFB4AO15263 64 aa1.56□□□□□ -2.16
UBR3-211ENST00000487689 RNASE3P12724 160 aaKnown RBP1.56□□□□□ -2.16
UBR3-211ENST00000487689 IL7P13232 177 aa1.56□□□□□ -2.16
UBR3-211ENST00000487689 UBE2G1P62253 170 aa1.56□□□□□ -2.16
UBR3-211ENST00000487689 MT1HP80294 61 aa1.56□□□□□ -2.16
UBR3-211ENST00000487689 MPV17LQ2QL34 196 aa1.56□□□□□ -2.16
UBR3-211ENST00000487689 ZCCHC13Q8WW36 166 aaKnown RBP1.56□□□□□ -2.16
UBR3-211ENST00000487689 LINC01600Q96MT4 127 aa1.56□□□□□ -2.16
UBR3-211ENST00000487689 DSCR8Q96T75 97 aa1.56□□□□□ -2.16
UBR3-211ENST00000487689 ATG5Q9H1Y0 275 aa1.56□□□□□ -2.16
UBR3-211ENST00000487689 DEFB131BA0A096LNP1 70 aa1.55□□□□□ -2.16
UBR3-211ENST00000487689 TRBV6-5A0A0K0K1A5 114 aa1.55□□□□□ -2.16
UBR3-211ENST00000487689 TRBV10-3A0A0K0K1G6 114 aa1.55□□□□□ -2.16
UBR3-211ENST00000487689 GYPAP02724 150 aa1.55□□□□□ -2.16
UBR3-211ENST00000487689 INSL4Q14641 139 aa1.55□□□□□ -2.16
UBR3-211ENST00000487689 COMMD6Q7Z4G1 85 aa1.55□□□□□ -2.16
UBR3-211ENST00000487689 CDC42SE1Q9NRR8 79 aa1.55□□□□□ -2.16
UBR3-211ENST00000487689 MED9Q9NWA0 146 aa1.55□□□□□ -2.16
UBR3-211ENST00000487689 MRPL36Q9P0J6 103 aaKnown RBP1.55□□□□□ -2.16
UBR3-211ENST00000487689 TMEM14CQ9P0S9 112 aa1.55□□□□□ -2.16
UBR3-211ENST00000487689 SCP2D1Q9UJQ7 156 aa1.55□□□□□ -2.16
UBR3-211ENST00000487689 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
UBR3-211ENST00000487689 A0A087WTM6 91 aa1.54□□□□□ -2.16
UBR3-211ENST00000487689 JMJD7-PLA2G4BH0Y9G9 81 aa1.54□□□□□ -2.16
UBR3-211ENST00000487689 INE1O15225 51 aa1.54□□□□□ -2.16
UBR3-211ENST00000487689 PDE6GP18545 87 aa1.54□□□□□ -2.16
UBR3-211ENST00000487689 RBM3P98179 157 aaKnown RBP1.54□□□□□ -2.16
UBR3-211ENST00000487689 S100A7L2Q5SY68 101 aa1.54□□□□□ -2.16
UBR3-211ENST00000487689 CSAG1Q6PB30 78 aa1.54□□□□□ -2.16
UBR3-211ENST00000487689 C5orf56Q8N8D9 126 aa1.54□□□□□ -2.16
UBR3-211ENST00000487689 WFDC6Q9BQY6 131 aa1.54□□□□□ -2.16
UBR3-211ENST00000487689 MRPL35Q9NZE8 188 aaKnown RBP1.54□□□□□ -2.16
UBR3-211ENST00000487689 HILPDAQ9Y5L2 63 aa1.54□□□□□ -2.16
UBR3-211ENST00000487689 SNURFQ9Y675 71 aa1.54□□□□□ -2.16
UBR3-211ENST00000487689 FLGP20930 4061 aaPredicted RBP1.54□□□□□ -2.16
UBR3-211ENST00000487689 MRPS14O60783 128 aaKnown RBP1.53□□□□□ -2.16
UBR3-211ENST00000487689 IGKCP01834 107 aa1.53□□□□□ -2.16
UBR3-211ENST00000487689 KRTAP19-2Q3LHN2 52 aa1.53□□□□□ -2.16
UBR3-211ENST00000487689 C9orf62Q8N4C0 152 aa1.53□□□□□ -2.16
UBR3-211ENST00000487689 CYP4F30PQ9H0H9 118 aa1.53□□□□□ -2.16
UBR3-211ENST00000487689 TRGV2A0A075B6R0 118 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 TRAV13-2A0A0B4J235 113 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 TRAV12-3A0A0B4J271 114 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 RBAKDNA6NC62 111 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 HIGD1CA8MV81 97 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 PPYP01298 95 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 CCKP06307 115 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 KRTDAPP60985 99 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 MINOS1Q5TGZ0 78 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 ZNF818PQ6ZRF7 136 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 IFI27L1Q96BM0 104 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 ODF3Q96PU9 254 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 VAMP8Q9BV40 100 aa1.52□□□□□ -2.17
UBR3-211ENST00000487689 IGKV3-7A0A075B6H7 116 aa1.51□□□□□ -2.17
UBR3-211ENST00000487689 LOC110117498A0A087WWA1 95 aa1.51□□□□□ -2.17
UBR3-211ENST00000487689 TEX49A0A1B0GTD5 131 aa1.51□□□□□ -2.17
UBR3-211ENST00000487689 HCG22E2RYF7 251 aa1.51□□□□□ -2.17
UBR3-211ENST00000487689 J3QRE1 110 aa1.51□□□□□ -2.17
UBR3-211ENST00000487689 SIX6O95475 246 aa1.51□□□□□ -2.17
UBR3-211ENST00000487689 SNCAP37840 140 aa1.51□□□□□ -2.17
UBR3-211ENST00000487689 CAV3P56539 151 aa1.51□□□□□ -2.17
UBR3-211ENST00000487689 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
UBR3-211ENST00000487689 KRTAP19-6Q3LI70 58 aa1.51□□□□□ -2.17
UBR3-211ENST00000487689 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
UBR3-211ENST00000487689 LINC00312Q9Y6C7 94 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms