RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PKD1L1Q8TDX9 2849 aa17.05■□□□□ 0.32
HLA-C-208ENST00000487245 KCNQ1DNQ9H478 68 aa17.03■□□□□ 0.32
HLA-C-208ENST00000487245 PLA2G2DQ9UNK4 145 aa17.03■□□□□ 0.32
HLA-C-208ENST00000487245 NKAPP1Q8N9T2 125 aa17.02■□□□□ 0.32
HLA-C-208ENST00000487245 ANK2Q01484 3957 aa16.99■□□□□ 0.31
HLA-C-208ENST00000487245 CYSTM1Q9H1C7 97 aa16.98■□□□□ 0.31
HLA-C-208ENST00000487245 TMEM258P61165 79 aa16.97■□□□□ 0.31
HLA-C-208ENST00000487245 HAMPP81172 84 aa16.97■□□□□ 0.31
HLA-C-208ENST00000487245 SVIPQ8NHG7 77 aa16.96■□□□□ 0.31
HLA-C-208ENST00000487245 C7orf33Q8WU49 177 aa16.96■□□□□ 0.31
HLA-C-208ENST00000487245 IGLV5-37A0A075B6J1 123 aa16.95■□□□□ 0.3
HLA-C-208ENST00000487245 SERTAD4-AS1Q5TG53 156 aa16.94■□□□□ 0.3
HLA-C-208ENST00000487245 COL6A5A8TX70 2615 aa16.93■□□□□ 0.3
HLA-C-208ENST00000487245 RPS28P62857 69 aaKnown RBP16.91■□□□□ 0.3
HLA-C-208ENST00000487245 CASC10Q5T4H9 136 aa16.91■□□□□ 0.3
HLA-C-208ENST00000487245 TRAV7A0A075B6U4 112 aa16.89■□□□□ 0.29
HLA-C-208ENST00000487245 J3KT08 172 aa16.88■□□□□ 0.29
HLA-C-208ENST00000487245 PRYO14603 147 aa16.88■□□□□ 0.29
HLA-C-208ENST00000487245 DHRS4-AS1Q9P1J3 65 aa16.86■□□□□ 0.29
HLA-C-208ENST00000487245 NOTCH1P46531 2555 aa16.86■□□□□ 0.29
HLA-C-208ENST00000487245 LOC107984640A0A0U1RRK4 108 aa16.86■□□□□ 0.29
HLA-C-208ENST00000487245 KRTAP4-16G5E9R7 235 aaPredicted RBP16.85■□□□□ 0.29
HLA-C-208ENST00000487245 SPRR1AP35321 89 aa16.84■□□□□ 0.29
HLA-C-208ENST00000487245 Q8N377 158 aa16.83■□□□□ 0.28
HLA-C-208ENST00000487245 MDFIQ99750 246 aa16.83■□□□□ 0.28
HLA-C-208ENST00000487245 IGLV1-50A0A075B6I6 118 aa16.82■□□□□ 0.28
HLA-C-208ENST00000487245 IGLV5-48A0A075B6I7 105 aa16.82■□□□□ 0.28
HLA-C-208ENST00000487245 Q6ZRX8 168 aa16.82■□□□□ 0.28
HLA-C-208ENST00000487245 HUWE1Q7Z6Z7 4374 aaKnown RBP16.8■□□□□ 0.28
HLA-C-208ENST00000487245 A0A1B0GW54 56 aa16.78■□□□□ 0.28
HLA-C-208ENST00000487245 DPH3Q96FX2 82 aa16.78■□□□□ 0.28
HLA-C-208ENST00000487245 FAM168BA1KXE4 195 aa16.76■□□□□ 0.27
HLA-C-208ENST00000487245 ETDCA0A1B0GVM5 59 aa16.76■□□□□ 0.27
HLA-C-208ENST00000487245 KRTAP7-1Q8IUC3 87 aa16.76■□□□□ 0.27
HLA-C-208ENST00000487245 C20orf197Q8N268 126 aa16.76■□□□□ 0.27
HLA-C-208ENST00000487245 Q9BRP9 147 aa16.75■□□□□ 0.27
HLA-C-208ENST00000487245 RPL37AP8A6NKH3 93 aa16.74■□□□□ 0.27
HLA-C-208ENST00000487245 MRPL55Q7Z7F7 128 aaKnown RBP16.74■□□□□ 0.27
HLA-C-208ENST00000487245 SCXQ7RTU7 201 aa16.73■□□□□ 0.27
HLA-C-208ENST00000487245 APLNQ9ULZ1 77 aa16.73■□□□□ 0.27
HLA-C-208ENST00000487245 UBE2DNLQ8IWF7 75 aa16.73■□□□□ 0.27
HLA-C-208ENST00000487245 NREPQ16612 68 aa16.72■□□□□ 0.27
HLA-C-208ENST00000487245 DEFB105AQ8NG35 78 aa16.72■□□□□ 0.27
HLA-C-208ENST00000487245 B9D2Q9BPU9 175 aa16.72■□□□□ 0.27
HLA-C-208ENST00000487245 TNP2Q05952 138 aa16.71■□□□□ 0.27
HLA-C-208ENST00000487245 NBEAL1Q6ZS30 2694 aa16.71■□□□□ 0.27
HLA-C-208ENST00000487245 KLKP1Q107X0 134 aa16.71■□□□□ 0.27
HLA-C-208ENST00000487245 CNBPP62633 177 aaKnown RBP16.69■□□□□ 0.26
HLA-C-208ENST00000487245 FAM19A5Q7Z5A7 132 aaPredicted RBP16.69■□□□□ 0.26
HLA-C-208ENST00000487245 KRTAP1-5Q9BYS1 174 aa16.68■□□□□ 0.26
HLA-C-208ENST00000487245 PSCAO43653 123 aa16.67■□□□□ 0.26
HLA-C-208ENST00000487245 IGKV4-1P06312 121 aa16.67■□□□□ 0.26
HLA-C-208ENST00000487245 DNAH1Q9P2D7 4330 aa16.67■□□□□ 0.26
HLA-C-208ENST00000487245 C14orf177Q52M58 125 aa16.67■□□□□ 0.26
HLA-C-208ENST00000487245 C16orf90A8MZG2 172 aa16.64■□□□□ 0.25
HLA-C-208ENST00000487245 FUSP35637 526 aaKnown RBP eCLIP16.64■□□□□ 0.25
HLA-C-208ENST00000487245 H7BZZ5 65 aa16.63■□□□□ 0.25
HLA-C-208ENST00000487245 BPY2O14599 106 aa16.62■□□□□ 0.25
HLA-C-208ENST00000487245 REG3GQ6UW15 175 aa16.62■□□□□ 0.25
HLA-C-208ENST00000487245 A0A1W2PNM2 257 aa16.61■□□□□ 0.25
HLA-C-208ENST00000487245 ERC2-IT1O76042 136 aa16.61■□□□□ 0.25
HLA-C-208ENST00000487245 C3orf84H3BNL1 204 aa16.61■□□□□ 0.25
HLA-C-208ENST00000487245 C1orf137Q5JT78 98 aa16.6■□□□□ 0.25
HLA-C-208ENST00000487245 ST20-AS1Q8NBB2 130 aa16.6■□□□□ 0.25
HLA-C-208ENST00000487245 FAM236DA0A1B0GTK5 79 aa16.59■□□□□ 0.25
HLA-C-208ENST00000487245 FAM236CP0DP71 79 aa16.59■□□□□ 0.25
HLA-C-208ENST00000487245 Q8NBF4 154 aa16.59■□□□□ 0.25
HLA-C-208ENST00000487245 SPRR4Q96PI1 79 aa16.58■□□□□ 0.24
HLA-C-208ENST00000487245 A0A096LNI7 61 aa16.57■□□□□ 0.24
HLA-C-208ENST00000487245 MGAM2Q2M2H8 2515 aa16.56■□□□□ 0.24
HLA-C-208ENST00000487245 UBE2BP63146 152 aa16.56■□□□□ 0.24
HLA-C-208ENST00000487245 NDUFC1O43677 76 aa16.55■□□□□ 0.24
HLA-C-208ENST00000487245 OXTP01178 125 aa16.55■□□□□ 0.24
HLA-C-208ENST00000487245 Q8N9L7 120 aa16.54■□□□□ 0.24
HLA-C-208ENST00000487245 NUPR2A6NF83 97 aa16.54■□□□□ 0.24
HLA-C-208ENST00000487245 PKIGQ9Y2B9 76 aa16.54■□□□□ 0.24
HLA-C-208ENST00000487245 IGKV2-24A0A0C4DH68 120 aa16.5■□□□□ 0.23
HLA-C-208ENST00000487245 SMIM29Q86T20 159 aa16.5■□□□□ 0.23
HLA-C-208ENST00000487245 OCR1Q9BZK8 76 aa16.5■□□□□ 0.23
HLA-C-208ENST00000487245 SNURFQ9Y675 71 aa16.5■□□□□ 0.23
HLA-C-208ENST00000487245 KRTAP21-3Q3LHN1 58 aa16.5■□□□□ 0.23
HLA-C-208ENST00000487245 A0A1W2PNN7 141 aa16.49■□□□□ 0.23
HLA-C-208ENST00000487245 EPM2AB3EWF7 344 aa16.49■□□□□ 0.23
HLA-C-208ENST00000487245 NBDYA0A0U1RRE5 68 aa16.47■□□□□ 0.23
HLA-C-208ENST00000487245 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.46■□□□□ 0.22
HLA-C-208ENST00000487245 SERP1Q9Y6X1 66 aa16.46■□□□□ 0.22
HLA-C-208ENST00000487245 DNAH9Q9NYC9 4486 aa16.45■□□□□ 0.22
HLA-C-208ENST00000487245 TMEM254Q8TBM7 123 aa16.45■□□□□ 0.22
HLA-C-208ENST00000487245 F8WEM9 126 aa16.44■□□□□ 0.22
HLA-C-208ENST00000487245 C9orf163Q8N9P6 203 aa16.42■□□□□ 0.22
HLA-C-208ENST00000487245 LRCOL1A6NCL2 159 aa16.42■□□□□ 0.22
HLA-C-208ENST00000487245 ATP5EP56381 51 aaPredicted RBP16.42■□□□□ 0.22
HLA-C-208ENST00000487245 IGLV8-61A0A075B6I0 122 aa16.41■□□□□ 0.22
HLA-C-208ENST00000487245 LINC00476Q8WZB0 136 aa16.41■□□□□ 0.22
HLA-C-208ENST00000487245 DYNC2H1Q8NCM8 4307 aaKnown RBP16.41■□□□□ 0.22
HLA-C-208ENST00000487245 STAB2Q8WWQ8 2551 aa16.4■□□□□ 0.22
HLA-C-208ENST00000487245 A0A0U1RQV1 116 aa16.38■□□□□ 0.21
HLA-C-208ENST00000487245 LINC00474Q9P2X8 69 aa16.37■□□□□ 0.21
HLA-C-208ENST00000487245 DSCR10P59022 87 aa16.37■□□□□ 0.21
HLA-C-208ENST00000487245 H0Y9J4 135 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms