RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 H0Y9J4 135 aa11.76□□□□□ -0.53
PCOLCE-208ENST00000487172 UBE2AP49459 152 aa11.76□□□□□ -0.53
PCOLCE-208ENST00000487172 PKHD1L1Q86WI1 4243 aa11.75□□□□□ -0.53
PCOLCE-208ENST00000487172 ETDCA0A1B0GVM5 59 aa11.73□□□□□ -0.53
PCOLCE-208ENST00000487172 A6NDN8 102 aa11.73□□□□□ -0.53
PCOLCE-208ENST00000487172 ZNF73O43830 326 aaPredicted RBP11.73□□□□□ -0.53
PCOLCE-208ENST00000487172 PRLHP81277 87 aa11.73□□□□□ -0.53
PCOLCE-208ENST00000487172 CEND1Q8N111 149 aa11.73□□□□□ -0.53
PCOLCE-208ENST00000487172 B5MCH6 92 aa11.71□□□□□ -0.53
PCOLCE-208ENST00000487172 OXTP01178 125 aa11.7□□□□□ -0.54
PCOLCE-208ENST00000487172 HSD52Q0P140 79 aa11.7□□□□□ -0.54
PCOLCE-208ENST00000487172 ABCA13Q86UQ4 5058 aa11.7□□□□□ -0.54
PCOLCE-208ENST00000487172 HINT1P49773 126 aaPredicted RBP11.69□□□□□ -0.54
PCOLCE-208ENST00000487172 C12orf57Q99622 126 aa11.69□□□□□ -0.54
PCOLCE-208ENST00000487172 PRO1933Q9H354 126 aa11.69□□□□□ -0.54
PCOLCE-208ENST00000487172 FLG2Q5D862 2391 aaPredicted RBP11.68□□□□□ -0.54
PCOLCE-208ENST00000487172 KRTAP29-1A8MX34 341 aaPredicted RBP11.68□□□□□ -0.54
PCOLCE-208ENST00000487172 Q6ZRX8 168 aa11.68□□□□□ -0.54
PCOLCE-208ENST00000487172 CFC1BP0CG36 223 aa11.67□□□□□ -0.54
PCOLCE-208ENST00000487172 CFC1P0CG37 223 aa11.67□□□□□ -0.54
PCOLCE-208ENST00000487172 TMEM238LA0A1B0GVL6 79 aa11.66□□□□□ -0.54
PCOLCE-208ENST00000487172 A6NJY4 79 aa11.66□□□□□ -0.54
PCOLCE-208ENST00000487172 A0A0B4J2C4 111 aa11.65□□□□□ -0.54
PCOLCE-208ENST00000487172 TRBV7-6A0A0J9YX20 115 aa11.65□□□□□ -0.54
PCOLCE-208ENST00000487172 FXYD2P54710 66 aa11.65□□□□□ -0.54
PCOLCE-208ENST00000487172 C6orf99Q4VX62 202 aa11.65□□□□□ -0.54
PCOLCE-208ENST00000487172 LINC01600Q96MT4 127 aa11.65□□□□□ -0.54
PCOLCE-208ENST00000487172 HIGD2AQ9BW72 106 aa11.65□□□□□ -0.54
PCOLCE-208ENST00000487172 KRTAP1-4P0C5Y4 121 aa11.64□□□□□ -0.55
PCOLCE-208ENST00000487172 SMIM11BQ8TCY0 68 aa11.64□□□□□ -0.55
PCOLCE-208ENST00000487172 SMCR5Q8TEV8 140 aa11.63□□□□□ -0.55
PCOLCE-208ENST00000487172 TSTD3H0UI37 97 aa11.62□□□□□ -0.55
PCOLCE-208ENST00000487172 RPL13AP40429 203 aaKnown RBP11.62□□□□□ -0.55
PCOLCE-208ENST00000487172 ELOF1P60002 83 aaKnown RBP11.62□□□□□ -0.55
PCOLCE-208ENST00000487172 RAB37Q96AX2 223 aa11.62□□□□□ -0.55
PCOLCE-208ENST00000487172 Q9BRP9 147 aa11.62□□□□□ -0.55
PCOLCE-208ENST00000487172 COX7BP24311 80 aa11.61□□□□□ -0.55
PCOLCE-208ENST00000487172 A0A1B0GWB2 263 aa11.6□□□□□ -0.55
PCOLCE-208ENST00000487172 FAT3Q8TDW7 4589 aa11.57□□□□□ -0.56
PCOLCE-208ENST00000487172 DHRS4-AS1Q9P1J3 65 aa11.57□□□□□ -0.56
PCOLCE-208ENST00000487172 PRO1854Q9UHT4 67 aa11.57□□□□□ -0.56
PCOLCE-208ENST00000487172 ZNF706Q9Y5V0 76 aaPredicted RBP11.57□□□□□ -0.56
PCOLCE-208ENST00000487172 LRP1Q07954 4544 aaKnown RBP11.57□□□□□ -0.56
PCOLCE-208ENST00000487172 ERC2-IT1O76042 136 aa11.56□□□□□ -0.56
PCOLCE-208ENST00000487172 KRTAP10-8P60410 259 aa11.56□□□□□ -0.56
PCOLCE-208ENST00000487172 BVES-AS1Q5T3Y7 98 aa11.56□□□□□ -0.56
PCOLCE-208ENST00000487172 SPRR4Q96PI1 79 aa11.56□□□□□ -0.56
PCOLCE-208ENST00000487172 MYCBP2O75592 4640 aa11.55□□□□□ -0.56
PCOLCE-208ENST00000487172 MT1HL1P0DM35 61 aa11.55□□□□□ -0.56
PCOLCE-208ENST00000487172 CTAG1AP78358 180 aa11.55□□□□□ -0.56
PCOLCE-208ENST00000487172 VAMP3Q15836 100 aa11.55□□□□□ -0.56
PCOLCE-208ENST00000487172 NHP2Q9NX24 153 aaKnown RBP11.55□□□□□ -0.56
PCOLCE-208ENST00000487172 J3QL48 77 aa11.54□□□□□ -0.56
PCOLCE-208ENST00000487172 FAM229BQ4G0N7 80 aa11.54□□□□□ -0.56
PCOLCE-208ENST00000487172 PCLOQ9Y6V0 5065 aa11.52□□□□□ -0.56
PCOLCE-208ENST00000487172 H7C2G1 150 aa11.52□□□□□ -0.57
PCOLCE-208ENST00000487172 PRR26Q8N8Z3 221 aa11.52□□□□□ -0.57
PCOLCE-208ENST00000487172 M0R143 59 aa11.51□□□□□ -0.57
PCOLCE-208ENST00000487172 CRYGAP11844 174 aa11.5□□□□□ -0.57
PCOLCE-208ENST00000487172 LINC00483Q53H64 154 aa11.5□□□□□ -0.57
PCOLCE-208ENST00000487172 ANAPC11Q9NYG5 84 aa11.5□□□□□ -0.57
PCOLCE-208ENST00000487172 A0A087X002 238 aa11.49□□□□□ -0.57
PCOLCE-208ENST00000487172 Q1RN00 199 aa11.48□□□□□ -0.57
PCOLCE-208ENST00000487172 LINC00575Q6W349 94 aa11.48□□□□□ -0.57
PCOLCE-208ENST00000487172 K7ERJ3 54 aa11.47□□□□□ -0.57
PCOLCE-208ENST00000487172 GAGE2AQ6NT46 116 aa11.47□□□□□ -0.57
PCOLCE-208ENST00000487172 H0YGX0 51 aa11.46□□□□□ -0.57
PCOLCE-208ENST00000487172 SLC25A20O43772 301 aa11.46□□□□□ -0.57
PCOLCE-208ENST00000487172 ST20-AS1Q8NBB2 130 aa11.46□□□□□ -0.57
PCOLCE-208ENST00000487172 SPRR1BP22528 89 aa11.45□□□□□ -0.58
PCOLCE-208ENST00000487172 KRTAP13-2Q52LG2 175 aa11.44□□□□□ -0.58
PCOLCE-208ENST00000487172 hADV29S1A0JD25 119 aa11.43□□□□□ -0.58
PCOLCE-208ENST00000487172 TSPAN13O95857 204 aa11.42□□□□□ -0.58
PCOLCE-208ENST00000487172 TNXBP22105 4242 aa11.42□□□□□ -0.58
PCOLCE-208ENST00000487172 TRIAP1O43715 76 aa11.41□□□□□ -0.58
PCOLCE-208ENST00000487172 TYMSOSQ8TAI1 123 aa11.41□□□□□ -0.58
PCOLCE-208ENST00000487172 IGLV5-48A0A075B6I7 105 aa11.4□□□□□ -0.58
PCOLCE-208ENST00000487172 TEX49A0A1B0GTD5 131 aa11.39□□□□□ -0.59
PCOLCE-208ENST00000487172 LINC01547P58512 204 aaPredicted RBP11.39□□□□□ -0.59
PCOLCE-208ENST00000487172 A0A1B0GX51 115 aa11.38□□□□□ -0.59
PCOLCE-208ENST00000487172 C3orf22Q8N5N4 141 aa11.38□□□□□ -0.59
PCOLCE-208ENST00000487172 SNCGO76070 127 aa11.37□□□□□ -0.59
PCOLCE-208ENST00000487172 COX6CP09669 75 aa11.37□□□□□ -0.59
PCOLCE-208ENST00000487172 PSMB2P49721 201 aa11.37□□□□□ -0.59
PCOLCE-208ENST00000487172 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.37□□□□□ -0.59
PCOLCE-208ENST00000487172 DEFB105AQ8NG35 78 aa11.36□□□□□ -0.59
PCOLCE-208ENST00000487172 FAM218AQ96MZ4 157 aa11.36□□□□□ -0.59
PCOLCE-208ENST00000487172 DMBT1Q9UGM3 2413 aaPredicted RBP11.36□□□□□ -0.59
PCOLCE-208ENST00000487172 Q6ZQY7 126 aa11.35□□□□□ -0.59
PCOLCE-208ENST00000487172 Q8N377 158 aa11.34□□□□□ -0.59
PCOLCE-208ENST00000487172 LAMTOR3Q9UHA4 124 aa11.34□□□□□ -0.59
PCOLCE-208ENST00000487172 SSBP3-AS1Q7Z2R9 100 aa11.33□□□□□ -0.6
PCOLCE-208ENST00000487172 BATFQ16520 125 aa11.32□□□□□ -0.6
PCOLCE-208ENST00000487172 SMIM29Q86T20 159 aa11.32□□□□□ -0.6
PCOLCE-208ENST00000487172 IGLV9-49A0A0B4J1Y8 123 aa11.31□□□□□ -0.6
PCOLCE-208ENST00000487172 OCIAD2Q56VL3 154 aa11.31□□□□□ -0.6
PCOLCE-208ENST00000487172 PPDPFLQ8WWR9 84 aa11.31□□□□□ -0.6
PCOLCE-208ENST00000487172 CLEC2BQ92478 149 aa11.3□□□□□ -0.6
PCOLCE-208ENST00000487172 SCGB1C2P0DMR2 95 aa11.29□□□□□ -0.6
PCOLCE-208ENST00000487172 MOBPQ13875 183 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms