RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 CHTOPQ9Y3Y2 248 aaKnown RBP3.98□□□□□ -1.77
PDPN-205ENST00000487038 MYMXA0A1B0GTQ4 84 aa3.97□□□□□ -1.77
PDPN-205ENST00000487038 A0A096LNJ9 63 aa3.96□□□□□ -1.78
PDPN-205ENST00000487038 LOC107984156A0A0G2JMH3 177 aa3.96□□□□□ -1.78
PDPN-205ENST00000487038 NDUFC2O95298 119 aa3.96□□□□□ -1.78
PDPN-205ENST00000487038 COX19Q49B96 90 aa3.96□□□□□ -1.78
PDPN-205ENST00000487038 C1orf195Q5TG92 126 aa3.96□□□□□ -1.78
PDPN-205ENST00000487038 SMIM29Q86T20 159 aa3.96□□□□□ -1.78
PDPN-205ENST00000487038 ARL17AQ8IVW1 177 aa3.96□□□□□ -1.78
PDPN-205ENST00000487038 DHRS4-AS1Q9P1J3 65 aa3.96□□□□□ -1.78
PDPN-205ENST00000487038 S100PP25815 95 aa3.95□□□□□ -1.78
PDPN-205ENST00000487038 IFITM2Q01629 132 aa3.95□□□□□ -1.78
PDPN-205ENST00000487038 NEBP20929 6669 aa3.95□□□□□ -1.78
PDPN-205ENST00000487038 TRBV20-1A0A075B6N2 111 aa3.94□□□□□ -1.78
PDPN-205ENST00000487038 TCL1BO95988 128 aa3.94□□□□□ -1.78
PDPN-205ENST00000487038 LINC00614P0C842 121 aa3.94□□□□□ -1.78
PDPN-205ENST00000487038 AKR1D1P51857 326 aa3.94□□□□□ -1.78
PDPN-205ENST00000487038 Q1RN00 199 aa3.94□□□□□ -1.78
PDPN-205ENST00000487038 TRAV12-1A0A0B4J245 112 aa3.93□□□□□ -1.78
PDPN-205ENST00000487038 LCE2BO14633 110 aa3.93□□□□□ -1.78
PDPN-205ENST00000487038 FABP9Q0Z7S8 132 aa3.93□□□□□ -1.78
PDPN-205ENST00000487038 PMCHL1Q16048 86 aa3.93□□□□□ -1.78
PDPN-205ENST00000487038 TAL2Q16559 108 aa3.93□□□□□ -1.78
PDPN-205ENST00000487038 C10orf91Q5T1B1 145 aa3.93□□□□□ -1.78
PDPN-205ENST00000487038 MT2AP02795 61 aa3.92□□□□□ -1.78
PDPN-205ENST00000487038 Q75L30 129 aa3.92□□□□□ -1.78
PDPN-205ENST00000487038 SEC11CQ9BY50 192 aa3.92□□□□□ -1.78
PDPN-205ENST00000487038 KRTAP3-3Q9BYR6 98 aa3.92□□□□□ -1.78
PDPN-205ENST00000487038 KRTAP3-2Q9BYR7 98 aa3.92□□□□□ -1.78
PDPN-205ENST00000487038 hCG_2014768A0A024R1R8 64 aa3.91□□□□□ -1.78
PDPN-205ENST00000487038 TEX49A0A1B0GTD5 131 aa3.91□□□□□ -1.78
PDPN-205ENST00000487038 PCP2Q8IVA1 136 aa3.91□□□□□ -1.78
PDPN-205ENST00000487038 C18orf32Q8TCD1 76 aa3.91□□□□□ -1.78
PDPN-205ENST00000487038 NMUP48645 174 aa3.9□□□□□ -1.79
PDPN-205ENST00000487038 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.79
PDPN-205ENST00000487038 C6orf99Q4VX62 202 aa3.9□□□□□ -1.79
PDPN-205ENST00000487038 DEFB105AQ8NG35 78 aa3.9□□□□□ -1.79
PDPN-205ENST00000487038 URB1-AS1Q96HZ7 61 aa3.9□□□□□ -1.79
PDPN-205ENST00000487038 LEPROTO15243 131 aa3.89□□□□□ -1.79
PDPN-205ENST00000487038 MT1FP04733 61 aa3.89□□□□□ -1.79
PDPN-205ENST00000487038 ELOF1P60002 83 aaKnown RBP3.89□□□□□ -1.79
PDPN-205ENST00000487038 KRTAP10-10P60014 251 aa3.89□□□□□ -1.79
PDPN-205ENST00000487038 NPC2P61916 151 aa3.89□□□□□ -1.79
PDPN-205ENST00000487038 RHEBQ15382 184 aa3.89□□□□□ -1.79
PDPN-205ENST00000487038 OR13C6PQ8NH95 151 aa3.89□□□□□ -1.79
PDPN-205ENST00000487038 IFI27L1Q96BM0 104 aa3.89□□□□□ -1.79
PDPN-205ENST00000487038 FAM236DA0A1B0GTK5 79 aa3.88□□□□□ -1.79
PDPN-205ENST00000487038 FAM236CP0DP71 79 aa3.88□□□□□ -1.79
PDPN-205ENST00000487038 COX7BP24311 80 aa3.88□□□□□ -1.79
PDPN-205ENST00000487038 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
PDPN-205ENST00000487038 OBSCN-AS1Q96MR7 158 aa3.88□□□□□ -1.79
PDPN-205ENST00000487038 KRTAP9-3Q9BYQ3 159 aa3.88□□□□□ -1.79
PDPN-205ENST00000487038 RPS10P5Q9NQ39 176 aa3.88□□□□□ -1.79
PDPN-205ENST00000487038 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
PDPN-205ENST00000487038 J3QQQ9 107 aa3.87□□□□□ -1.79
PDPN-205ENST00000487038 LGALS3P17931 250 aaKnown RBP3.87□□□□□ -1.79
PDPN-205ENST00000487038 TSPEAR-AS2P59090 65 aa3.87□□□□□ -1.79
PDPN-205ENST00000487038 HERVK_113P61574 105 aa3.87□□□□□ -1.79
PDPN-205ENST00000487038 SPANXCQ9NY87 97 aa3.87□□□□□ -1.79
PDPN-205ENST00000487038 SPANXDQ9BXN6 97 aa3.86□□□□□ -1.79
PDPN-205ENST00000487038 TRAPPC1Q9Y5R8 145 aa3.86□□□□□ -1.79
PDPN-205ENST00000487038 F8WEM9 126 aa3.85□□□□□ -1.79
PDPN-205ENST00000487038 H0Y8G0 127 aa3.85□□□□□ -1.79
PDPN-205ENST00000487038 PLNP26678 52 aa3.85□□□□□ -1.79
PDPN-205ENST00000487038 SOSTDC1Q6X4U4 206 aa3.85□□□□□ -1.79
PDPN-205ENST00000487038 CHCHD1Q96BP2 118 aaKnown RBP3.85□□□□□ -1.79
PDPN-205ENST00000487038 C20orf166-AS1Q96NR2 134 aa3.85□□□□□ -1.79
PDPN-205ENST00000487038 IGLV5-48A0A075B6I7 105 aa3.84□□□□□ -1.79
PDPN-205ENST00000487038 A0A0G2JQZ4 141 aa3.84□□□□□ -1.79
PDPN-205ENST00000487038 Q96NJ1 140 aa3.84□□□□□ -1.79
PDPN-205ENST00000487038 TRBV7-6A0A0J9YX20 115 aa3.83□□□□□ -1.8
PDPN-205ENST00000487038 NHP2Q9NX24 153 aaKnown RBP3.83□□□□□ -1.8
PDPN-205ENST00000487038 RBM12B-AS1Q9P1G2 102 aa3.83□□□□□ -1.8
PDPN-205ENST00000487038 A0A0J9YXY3 114 aa3.82□□□□□ -1.8
PDPN-205ENST00000487038 A0A1B0GWB2 263 aa3.82□□□□□ -1.8
PDPN-205ENST00000487038 IGFL1Q6UW32 110 aa3.82□□□□□ -1.8
PDPN-205ENST00000487038 UQCC3Q6UW78 93 aa3.82□□□□□ -1.8
PDPN-205ENST00000487038 LINC00518Q8N0U6 118 aa3.82□□□□□ -1.8
PDPN-205ENST00000487038 EIF4EBP3O60516 100 aaPredicted RBP3.81□□□□□ -1.8
PDPN-205ENST00000487038 HSBP1O75506 76 aa3.81□□□□□ -1.8
PDPN-205ENST00000487038 DPM2O94777 84 aa3.81□□□□□ -1.8
PDPN-205ENST00000487038 ADAMTSL4-AS1Q5T5F5 129 aa3.81□□□□□ -1.8
PDPN-205ENST00000487038 LINC00308Q8TCZ7 52 aa3.81□□□□□ -1.8
PDPN-205ENST00000487038 TRBV7-7A0A0K0K1E9 115 aa3.8□□□□□ -1.8
PDPN-205ENST00000487038 TMEM218A2RU14 115 aa3.8□□□□□ -1.8
PDPN-205ENST00000487038 A4D1N5 150 aa3.8□□□□□ -1.8
PDPN-205ENST00000487038 Q6JHZ5 121 aa3.8□□□□□ -1.8
PDPN-205ENST00000487038 CLEC2BQ92478 149 aa3.8□□□□□ -1.8
PDPN-205ENST00000487038 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
PDPN-205ENST00000487038 ZNF815PA8K554 130 aa3.79□□□□□ -1.8
PDPN-205ENST00000487038 A8MUU9 505 aa3.79□□□□□ -1.8
PDPN-205ENST00000487038 LST1O00453 97 aa3.79□□□□□ -1.8
PDPN-205ENST00000487038 LEPROTL1O95214 131 aa3.79□□□□□ -1.8
PDPN-205ENST00000487038 IGKCP01834 107 aa3.79□□□□□ -1.8
PDPN-205ENST00000487038 TIMM17BO60830 172 aa3.78□□□□□ -1.8
PDPN-205ENST00000487038 KRTAP20-1Q3LI63 56 aa3.78□□□□□ -1.8
PDPN-205ENST00000487038 MTURNQ8N3F0 131 aa3.78□□□□□ -1.8
PDPN-205ENST00000487038 TRAV13-2A0A0B4J235 113 aa3.77□□□□□ -1.81
PDPN-205ENST00000487038 CLLU1Q5K131 121 aa3.77□□□□□ -1.81
PDPN-205ENST00000487038 SS18L2Q9UHA2 77 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms