RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 SYCNQ0VAF6 134 aa7.97□□□□□ -1.13
COL3A1-206ENST00000487010 NKAPP1Q8N9T2 125 aa7.97□□□□□ -1.13
COL3A1-206ENST00000487010 DEFB105AQ8NG35 78 aa7.97□□□□□ -1.13
COL3A1-206ENST00000487010 OCR1Q9BZK8 76 aa7.97□□□□□ -1.13
COL3A1-206ENST00000487010 IGLV5-48A0A075B6I7 105 aa7.96□□□□□ -1.13
COL3A1-206ENST00000487010 Q6ZTC4 211 aa7.96□□□□□ -1.13
COL3A1-206ENST00000487010 FP248Q71RG6 208 aaPredicted RBP7.96□□□□□ -1.13
COL3A1-206ENST00000487010 RETNQ9HD89 108 aa7.96□□□□□ -1.13
COL3A1-206ENST00000487010 IGKV2D-24A0A075B6R9 120 aa7.96□□□□□ -1.14
COL3A1-206ENST00000487010 SERTAD4-AS1Q5TG53 156 aa7.96□□□□□ -1.14
COL3A1-206ENST00000487010 C7orf33Q8WU49 177 aa7.96□□□□□ -1.14
COL3A1-206ENST00000487010 UNC79Q9P2D8 2635 aa7.95□□□□□ -1.14
COL3A1-206ENST00000487010 A0A0U1RQV1 116 aa7.94□□□□□ -1.14
COL3A1-206ENST00000487010 LINC01556Q5JQF7 62 aa7.94□□□□□ -1.14
COL3A1-206ENST00000487010 FASNP49327 2511 aaKnown RBP7.93□□□□□ -1.14
COL3A1-206ENST00000487010 TENM1Q9UKZ4 2725 aa7.93□□□□□ -1.14
COL3A1-206ENST00000487010 PRYO14603 147 aa7.93□□□□□ -1.14
COL3A1-206ENST00000487010 DHRS4-AS1Q9P1J3 65 aa7.93□□□□□ -1.14
COL3A1-206ENST00000487010 A0A1B0GW54 56 aa7.92□□□□□ -1.14
COL3A1-206ENST00000487010 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
COL3A1-206ENST00000487010 HIVEP1P15822 2718 aa7.91□□□□□ -1.14
COL3A1-206ENST00000487010 TLX1NBP0CAT3 122 aa7.91□□□□□ -1.14
COL3A1-206ENST00000487010 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.14
COL3A1-206ENST00000487010 Q6ZRX8 168 aa7.91□□□□□ -1.14
COL3A1-206ENST00000487010 LINC00336Q6ZUF6 198 aa7.91□□□□□ -1.14
COL3A1-206ENST00000487010 LINC00474Q9P2X8 69 aa7.91□□□□□ -1.14
COL3A1-206ENST00000487010 A0A1W2PNM2 257 aa7.9□□□□□ -1.14
COL3A1-206ENST00000487010 KRTAP4-16G5E9R7 235 aaPredicted RBP7.9□□□□□ -1.14
COL3A1-206ENST00000487010 MRAPQ8TCY5 172 aa7.9□□□□□ -1.14
COL3A1-206ENST00000487010 Q9BRP9 147 aa7.9□□□□□ -1.14
COL3A1-206ENST00000487010 RPL37AP8A6NKH3 93 aa7.9□□□□□ -1.15
COL3A1-206ENST00000487010 NOTCH2Q04721 2471 aa7.89□□□□□ -1.15
COL3A1-206ENST00000487010 TNP2Q05952 138 aa7.89□□□□□ -1.15
COL3A1-206ENST00000487010 IGLV1-50A0A075B6I6 118 aa7.88□□□□□ -1.15
COL3A1-206ENST00000487010 OXLD1Q5BKU9 147 aa7.88□□□□□ -1.15
COL3A1-206ENST00000487010 HIGD2AQ9BW72 106 aa7.88□□□□□ -1.15
COL3A1-206ENST00000487010 IGLV5-37A0A075B6J1 123 aa7.88□□□□□ -1.15
COL3A1-206ENST00000487010 SPRR1AP35321 89 aa7.88□□□□□ -1.15
COL3A1-206ENST00000487010 KRTAP10-11P60412 298 aa7.88□□□□□ -1.15
COL3A1-206ENST00000487010 C1orf137Q5JT78 98 aa7.88□□□□□ -1.15
COL3A1-206ENST00000487010 SMIM29Q86T20 159 aa7.88□□□□□ -1.15
COL3A1-206ENST00000487010 TRRAPQ9Y4A5 3859 aa7.87□□□□□ -1.15
COL3A1-206ENST00000487010 DEFB131BA0A096LNP1 70 aa7.87□□□□□ -1.15
COL3A1-206ENST00000487010 ETDCA0A1B0GVM5 59 aa7.87□□□□□ -1.15
COL3A1-206ENST00000487010 FAM168BA1KXE4 195 aa7.87□□□□□ -1.15
COL3A1-206ENST00000487010 ST20-AS1Q8NBB2 130 aa7.87□□□□□ -1.15
COL3A1-206ENST00000487010 PRO0628Q9UI54 55 aa7.87□□□□□ -1.15
COL3A1-206ENST00000487010 DNAH10OSP0CZ25 163 aa7.87□□□□□ -1.15
COL3A1-206ENST00000487010 Q8NBF4 154 aa7.87□□□□□ -1.15
COL3A1-206ENST00000487010 FAM30AQ9NZY2 134 aa7.87□□□□□ -1.15
COL3A1-206ENST00000487010 HELZ2Q9BYK8 2649 aaKnown RBP7.86□□□□□ -1.15
COL3A1-206ENST00000487010 FAM229BQ4G0N7 80 aa7.86□□□□□ -1.15
COL3A1-206ENST00000487010 SPRR4Q96PI1 79 aa7.85□□□□□ -1.15
COL3A1-206ENST00000487010 LCE6AA0A183 80 aa7.85□□□□□ -1.15
COL3A1-206ENST00000487010 KRTAP7-1Q8IUC3 87 aa7.85□□□□□ -1.15
COL3A1-206ENST00000487010 TEP1Q99973 2627 aaKnown RBP7.84□□□□□ -1.15
COL3A1-206ENST00000487010 OTOGQ6ZRI0 2925 aa7.84□□□□□ -1.15
COL3A1-206ENST00000487010 NSD1Q96L73 2696 aaPredicted RBP7.84□□□□□ -1.15
COL3A1-206ENST00000487010 C11orf45Q8TAV5 145 aa7.83□□□□□ -1.16
COL3A1-206ENST00000487010 DSCR10P59022 87 aa7.83□□□□□ -1.16
COL3A1-206ENST00000487010 ATRQ13535 2644 aa7.83□□□□□ -1.16
COL3A1-206ENST00000487010 CASC10Q5T4H9 136 aa7.82□□□□□ -1.16
COL3A1-206ENST00000487010 MRPL55Q7Z7F7 128 aaKnown RBP7.81□□□□□ -1.16
COL3A1-206ENST00000487010 KMT2BQ9UMN6 2715 aaPredicted RBP7.79□□□□□ -1.16
COL3A1-206ENST00000487010 K7EQZ3 153 aa7.79□□□□□ -1.16
COL3A1-206ENST00000487010 UBE2BP63146 152 aa7.79□□□□□ -1.16
COL3A1-206ENST00000487010 MPLKIPQ8TAP9 179 aa7.79□□□□□ -1.16
COL3A1-206ENST00000487010 PKD1L1Q8TDX9 2849 aa7.79□□□□□ -1.16
COL3A1-206ENST00000487010 ZCCHC13Q8WW36 166 aaKnown RBP7.79□□□□□ -1.16
COL3A1-206ENST00000487010 LINC00588Q9Y4M8 146 aa7.78□□□□□ -1.16
COL3A1-206ENST00000487010 REG3GQ6UW15 175 aa7.77□□□□□ -1.17
COL3A1-206ENST00000487010 LINC00476Q8WZB0 136 aa7.77□□□□□ -1.17
COL3A1-206ENST00000487010 HECTD1Q9ULT8 2610 aa7.77□□□□□ -1.17
COL3A1-206ENST00000487010 hDV103S1A0JD37 113 aa7.75□□□□□ -1.17
COL3A1-206ENST00000487010 HCG22E2RYF7 251 aa7.75□□□□□ -1.17
COL3A1-206ENST00000487010 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.74□□□□□ -1.17
COL3A1-206ENST00000487010 BRK1Q8WUW1 75 aa7.74□□□□□ -1.17
COL3A1-206ENST00000487010 PSCAO43653 123 aa7.73□□□□□ -1.17
COL3A1-206ENST00000487010 IGFL1Q6UW32 110 aa7.73□□□□□ -1.17
COL3A1-206ENST00000487010 A0A0G2JQZ4 141 aa7.72□□□□□ -1.17
COL3A1-206ENST00000487010 A0A1W2PNN7 141 aa7.72□□□□□ -1.17
COL3A1-206ENST00000487010 DNAH1Q9P2D7 4330 aa7.72□□□□□ -1.17
COL3A1-206ENST00000487010 ANK2Q01484 3957 aa7.72□□□□□ -1.17
COL3A1-206ENST00000487010 C1orf64Q8NEQ6 169 aa7.72□□□□□ -1.17
COL3A1-206ENST00000487010 TENM3Q9P273 2699 aa7.71□□□□□ -1.17
COL3A1-206ENST00000487010 CMYA5Q8N3K9 4069 aa7.7□□□□□ -1.18
COL3A1-206ENST00000487010 IGLV8-61A0A075B6I0 122 aa7.69□□□□□ -1.18
COL3A1-206ENST00000487010 DEFB116Q30KQ4 102 aa7.69□□□□□ -1.18
COL3A1-206ENST00000487010 KRTAP3-3Q9BYR6 98 aa7.69□□□□□ -1.18
COL3A1-206ENST00000487010 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
COL3A1-206ENST00000487010 LRCOL1A6NCL2 159 aa7.68□□□□□ -1.18
COL3A1-206ENST00000487010 PRLHP81277 87 aa7.68□□□□□ -1.18
COL3A1-206ENST00000487010 KRTAP24-1Q3LI83 254 aa7.68□□□□□ -1.18
COL3A1-206ENST00000487010 CYP4F30PQ9H0H9 118 aa7.68□□□□□ -1.18
COL3A1-206ENST00000487010 PKIGQ9Y2B9 76 aa7.68□□□□□ -1.18
COL3A1-206ENST00000487010 A0A087WSZ3 146 aa7.67□□□□□ -1.18
COL3A1-206ENST00000487010 Q1T7F1 81 aa7.67□□□□□ -1.18
COL3A1-206ENST00000487010 WFDC13Q8IUB5 93 aa7.67□□□□□ -1.18
COL3A1-206ENST00000487010 A0A096LNI7 61 aa7.66□□□□□ -1.18
COL3A1-206ENST00000487010 C16orf90A8MZG2 172 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms