RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 FABP9Q0Z7S8 132 aa2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 PEA15Q15121 130 aa2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 COA6Q5JTJ3 125 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 LINC00304Q8N9R0 145 aa2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 RETNLBQ9BQ08 111 aa2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 SNHG12Q9BXW3 62 aa2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 MAP1LC3AQ9H492 121 aa2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 GEMIN7Q9H840 131 aaKnown RBP2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 CDKN2A-AS1Q9UH64 79 aa2.25□□□□□ -2.05
SNRNP40-205ENST00000486941 IGKV2D-26A0A0A0MRZ7 120 aa2.24□□□□□ -2.05
SNRNP40-205ENST00000486941 UBE2AP49459 152 aa2.24□□□□□ -2.05
SNRNP40-205ENST00000486941 PDZD11Q5EBL8 140 aa2.24□□□□□ -2.05
SNRNP40-205ENST00000486941 HIST3H2BBQ8N257 126 aa2.24□□□□□ -2.05
SNRNP40-205ENST00000486941 NKAPP1Q8N9T2 125 aa2.24□□□□□ -2.05
SNRNP40-205ENST00000486941 COX7B2Q8TF08 81 aa2.24□□□□□ -2.05
SNRNP40-205ENST00000486941 TIMM17AQ99595 171 aa2.24□□□□□ -2.05
SNRNP40-205ENST00000486941 NXT2Q9NPJ8 142 aaKnown RBP2.24□□□□□ -2.05
SNRNP40-205ENST00000486941 SMCO4Q9NRQ5 59 aa2.24□□□□□ -2.05
SNRNP40-205ENST00000486941 MUC17Q685J3 4493 aa2.24□□□□□ -2.05
SNRNP40-205ENST00000486941 TINCRA0A1B0GVN0 87 aa2.23□□□□□ -2.05
SNRNP40-205ENST00000486941 TMEM238C9JI98 176 aa2.23□□□□□ -2.05
SNRNP40-205ENST00000486941 H0Y8G0 127 aa2.23□□□□□ -2.05
SNRNP40-205ENST00000486941 JOSD1Q15040 202 aaPredicted RBP2.23□□□□□ -2.05
SNRNP40-205ENST00000486941 SPAG11AQ6PDA7 123 aa2.23□□□□□ -2.05
SNRNP40-205ENST00000486941 FP248Q71RG6 208 aaPredicted RBP2.23□□□□□ -2.05
SNRNP40-205ENST00000486941 ERASQ7Z444 233 aa2.23□□□□□ -2.05
SNRNP40-205ENST00000486941 TOMM6Q96B49 74 aa2.23□□□□□ -2.05
SNRNP40-205ENST00000486941 PPDPFQ9H3Y8 114 aa2.23□□□□□ -2.05
SNRNP40-205ENST00000486941 DHRS4-AS1Q9P1J3 65 aa2.23□□□□□ -2.05
SNRNP40-205ENST00000486941 IGKV2-28A0A075B6P5 120 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 LINC01549A6NIU2 74 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 IGKV2D-28P01615 120 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 ASB16-AS1Q495Z4 193 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 FAM19A1Q7Z5A9 133 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 LINC00337Q8N6G1 96 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 PLEKHB2Q96CS7 222 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 SCGB3A1Q96QR1 104 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 HIST1H2BLQ99880 126 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 GNB1LQ9BYB4 327 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 TMEM126AQ9H061 195 aa2.22□□□□□ -2.05
SNRNP40-205ENST00000486941 FSIP2Q5CZC0 6907 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 A0A0U1RRA0 63 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 LINC01546A6NGU7 62 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 H3BRM9 83 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 M0R378 163 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST1H2BKO60814 126 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 ATP5LO75964 103 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST1H2BJP06899 126 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST1H2BOP23527 126 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST1H2BBP33778 126 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST1H2BDP58876 126 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST1H2BCP62807 126 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 PRLHP81277 87 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 COX17Q14061 63 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST2H2BEQ16778 126 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 C3orf22Q8N5N4 141 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST1H2BHQ93079 126 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST1H2BNQ99877 126 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 HIST1H2BMQ99879 126 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 CST9LQ9H4G1 147 aa2.21□□□□□ -2.06
SNRNP40-205ENST00000486941 M0R143 59 aa2.2□□□□□ -2.06
SNRNP40-205ENST00000486941 SPINK8P0C7L1 97 aa2.2□□□□□ -2.06
SNRNP40-205ENST00000486941 PFN2P35080 140 aa2.2□□□□□ -2.06
SNRNP40-205ENST00000486941 PMVKQ15126 192 aa2.2□□□□□ -2.06
SNRNP40-205ENST00000486941 SPRR4Q96PI1 79 aa2.2□□□□□ -2.06
SNRNP40-205ENST00000486941 SND1-IT1Q9HBX3 110 aa2.2□□□□□ -2.06
SNRNP40-205ENST00000486941 CRCT1Q9UGL9 99 aa2.2□□□□□ -2.06
SNRNP40-205ENST00000486941 ERG28Q9UKR5 140 aa2.2□□□□□ -2.06
SNRNP40-205ENST00000486941 ZNF706Q9Y5V0 76 aaPredicted RBP2.2□□□□□ -2.06
SNRNP40-205ENST00000486941 TRAV9-1A0A075B6T8 112 aa2.19□□□□□ -2.06
SNRNP40-205ENST00000486941 TSTD3H0UI37 97 aa2.19□□□□□ -2.06
SNRNP40-205ENST00000486941 SPINK1P00995 79 aa2.19□□□□□ -2.06
SNRNP40-205ENST00000486941 IGLC3P0DOY3 106 aa2.19□□□□□ -2.06
SNRNP40-205ENST00000486941 RHEBQ15382 184 aa2.19□□□□□ -2.06
SNRNP40-205ENST00000486941 SFTA2Q6UW10 78 aa2.19□□□□□ -2.06
SNRNP40-205ENST00000486941 HIGD2AQ9BW72 106 aa2.19□□□□□ -2.06
SNRNP40-205ENST00000486941 KRTAP4-1Q9BYQ7 146 aa2.19□□□□□ -2.06
SNRNP40-205ENST00000486941 PRO1933Q9H354 126 aa2.19□□□□□ -2.06
SNRNP40-205ENST00000486941 ZNF22P17026 224 aaPredicted RBP2.18□□□□□ -2.06
SNRNP40-205ENST00000486941 RPS29P62273 56 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-205ENST00000486941 DAND5Q8N907 189 aa2.18□□□□□ -2.06
SNRNP40-205ENST00000486941 Q8NDZ9 215 aa2.18□□□□□ -2.06
SNRNP40-205ENST00000486941 SLC25A20O43772 301 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 S100A2P29034 98 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 SPRR1AP35321 89 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 COX19Q49B96 90 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 LINC00483Q53H64 154 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 FA2HQ7L5A8 372 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 SSBP3-AS1Q7Z2R9 100 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 FAM19A2Q8N3H0 131 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 SMCR5Q8TEV8 140 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 ZNF625Q96I27 306 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 MIEN1Q9BRT3 115 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 KCNQ1DNQ9H478 68 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 NDUFA12Q9UI09 145 aa2.17□□□□□ -2.06
SNRNP40-205ENST00000486941 A0A096LNJ9 63 aa2.16□□□□□ -2.06
SNRNP40-205ENST00000486941 C11orf86A6NJI1 115 aa2.16□□□□□ -2.06
SNRNP40-205ENST00000486941 SCGB1A1P11684 91 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms