RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 UQCR10Q9UDW1 63 aa11.6□□□□□ -0.55
ATG9A-221ENST00000486766 A6NDN8 102 aa11.59□□□□□ -0.55
ATG9A-221ENST00000486766 SPRR1AP35321 89 aa11.59□□□□□ -0.55
ATG9A-221ENST00000486766 TRAV13-2A0A0B4J235 113 aa11.58□□□□□ -0.56
ATG9A-221ENST00000486766 H0Y9J4 135 aa11.58□□□□□ -0.56
ATG9A-221ENST00000486766 FLG2Q5D862 2391 aaPredicted RBP11.58□□□□□ -0.56
ATG9A-221ENST00000486766 TAL2Q16559 108 aa11.57□□□□□ -0.56
ATG9A-221ENST00000486766 KRTAP13-1Q8IUC0 172 aa11.57□□□□□ -0.56
ATG9A-221ENST00000486766 ZNF73O43830 326 aaPredicted RBP11.56□□□□□ -0.56
ATG9A-221ENST00000486766 C12orf57Q99622 126 aa11.56□□□□□ -0.56
ATG9A-221ENST00000486766 PRO1933Q9H354 126 aa11.56□□□□□ -0.56
ATG9A-221ENST00000486766 KRTAP4-16G5E9R7 235 aaPredicted RBP11.54□□□□□ -0.56
ATG9A-221ENST00000486766 CEND1Q8N111 149 aa11.54□□□□□ -0.56
ATG9A-221ENST00000486766 HIGD2AQ9BW72 106 aa11.54□□□□□ -0.56
ATG9A-221ENST00000486766 HINT1P49773 126 aaPredicted RBP11.53□□□□□ -0.56
ATG9A-221ENST00000486766 B5MCH6 92 aa11.52□□□□□ -0.57
ATG9A-221ENST00000486766 HSD52Q0P140 79 aa11.52□□□□□ -0.57
ATG9A-221ENST00000486766 OXTP01178 125 aa11.51□□□□□ -0.57
ATG9A-221ENST00000486766 Q6ZRX8 168 aa11.51□□□□□ -0.57
ATG9A-221ENST00000486766 TMEM238LA0A1B0GVL6 79 aa11.5□□□□□ -0.57
ATG9A-221ENST00000486766 A6NJY4 79 aa11.5□□□□□ -0.57
ATG9A-221ENST00000486766 MYCBP2O75592 4640 aa11.5□□□□□ -0.57
ATG9A-221ENST00000486766 KRTAP29-1A8MX34 341 aaPredicted RBP11.49□□□□□ -0.57
ATG9A-221ENST00000486766 RPL13AP40429 203 aaKnown RBP11.49□□□□□ -0.57
ATG9A-221ENST00000486766 C6orf99Q4VX62 202 aa11.49□□□□□ -0.57
ATG9A-221ENST00000486766 RAB37Q96AX2 223 aa11.49□□□□□ -0.57
ATG9A-221ENST00000486766 CFC1BP0CG36 223 aa11.47□□□□□ -0.57
ATG9A-221ENST00000486766 CFC1P0CG37 223 aa11.47□□□□□ -0.57
ATG9A-221ENST00000486766 FXYD2P54710 66 aa11.47□□□□□ -0.57
ATG9A-221ENST00000486766 SMIM11BQ8TCY0 68 aa11.47□□□□□ -0.57
ATG9A-221ENST00000486766 J3QL48 77 aa11.46□□□□□ -0.57
ATG9A-221ENST00000486766 SMCR5Q8TEV8 140 aa11.46□□□□□ -0.57
ATG9A-221ENST00000486766 FAT3Q8TDW7 4589 aa11.46□□□□□ -0.57
ATG9A-221ENST00000486766 LRP1Q07954 4544 aaKnown RBP11.45□□□□□ -0.58
ATG9A-221ENST00000486766 A0A0B4J2C4 111 aa11.45□□□□□ -0.58
ATG9A-221ENST00000486766 TSTD3H0UI37 97 aa11.45□□□□□ -0.58
ATG9A-221ENST00000486766 COX7BP24311 80 aa11.45□□□□□ -0.58
ATG9A-221ENST00000486766 LINC01600Q96MT4 127 aa11.45□□□□□ -0.58
ATG9A-221ENST00000486766 Q9BRP9 147 aa11.45□□□□□ -0.58
ATG9A-221ENST00000486766 KRTAP1-4P0C5Y4 121 aa11.44□□□□□ -0.58
ATG9A-221ENST00000486766 TRBV7-6A0A0J9YX20 115 aa11.43□□□□□ -0.58
ATG9A-221ENST00000486766 ELOF1P60002 83 aaKnown RBP11.43□□□□□ -0.58
ATG9A-221ENST00000486766 A0A1B0GWB2 263 aa11.42□□□□□ -0.58
ATG9A-221ENST00000486766 H7C2G1 150 aa11.42□□□□□ -0.58
ATG9A-221ENST00000486766 ZNF706Q9Y5V0 76 aaPredicted RBP11.42□□□□□ -0.58
ATG9A-221ENST00000486766 NHP2Q9NX24 153 aaKnown RBP11.41□□□□□ -0.58
ATG9A-221ENST00000486766 ERC2-IT1O76042 136 aa11.4□□□□□ -0.58
ATG9A-221ENST00000486766 DHRS4-AS1Q9P1J3 65 aa11.4□□□□□ -0.58
ATG9A-221ENST00000486766 VAMP3Q15836 100 aa11.39□□□□□ -0.59
ATG9A-221ENST00000486766 Q1RN00 199 aa11.39□□□□□ -0.59
ATG9A-221ENST00000486766 PRR26Q8N8Z3 221 aa11.39□□□□□ -0.59
ATG9A-221ENST00000486766 SPRR4Q96PI1 79 aa11.39□□□□□ -0.59
ATG9A-221ENST00000486766 PRO1854Q9UHT4 67 aa11.39□□□□□ -0.59
ATG9A-221ENST00000486766 CTAG1AP78358 180 aa11.38□□□□□ -0.59
ATG9A-221ENST00000486766 ANAPC11Q9NYG5 84 aa11.38□□□□□ -0.59
ATG9A-221ENST00000486766 BVES-AS1Q5T3Y7 98 aa11.37□□□□□ -0.59
ATG9A-221ENST00000486766 MT1HL1P0DM35 61 aa11.36□□□□□ -0.59
ATG9A-221ENST00000486766 K7ERJ3 54 aa11.35□□□□□ -0.59
ATG9A-221ENST00000486766 CRYGAP11844 174 aa11.35□□□□□ -0.59
ATG9A-221ENST00000486766 M0R143 59 aa11.34□□□□□ -0.59
ATG9A-221ENST00000486766 FAM229BQ4G0N7 80 aa11.34□□□□□ -0.59
ATG9A-221ENST00000486766 GAGE2AQ6NT46 116 aa11.34□□□□□ -0.59
ATG9A-221ENST00000486766 A0A087X002 238 aa11.33□□□□□ -0.6
ATG9A-221ENST00000486766 KRTAP10-8P60410 259 aa11.33□□□□□ -0.6
ATG9A-221ENST00000486766 TNXBP22105 4242 aa11.32□□□□□ -0.6
ATG9A-221ENST00000486766 SLC25A20O43772 301 aa11.32□□□□□ -0.6
ATG9A-221ENST00000486766 ST20-AS1Q8NBB2 130 aa11.32□□□□□ -0.6
ATG9A-221ENST00000486766 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
ATG9A-221ENST00000486766 LINC00483Q53H64 154 aa11.29□□□□□ -0.6
ATG9A-221ENST00000486766 LINC00575Q6W349 94 aa11.28□□□□□ -0.6
ATG9A-221ENST00000486766 TYMSOSQ8TAI1 123 aa11.28□□□□□ -0.6
ATG9A-221ENST00000486766 HERC1Q15751 4861 aa11.28□□□□□ -0.6
ATG9A-221ENST00000486766 KRTAP13-2Q52LG2 175 aa11.27□□□□□ -0.61
ATG9A-221ENST00000486766 hADV29S1A0JD25 119 aa11.26□□□□□ -0.61
ATG9A-221ENST00000486766 TSPAN13O95857 204 aa11.26□□□□□ -0.61
ATG9A-221ENST00000486766 PSMB2P49721 201 aa11.26□□□□□ -0.61
ATG9A-221ENST00000486766 DEFB105AQ8NG35 78 aa11.26□□□□□ -0.61
ATG9A-221ENST00000486766 H0YGX0 51 aa11.25□□□□□ -0.61
ATG9A-221ENST00000486766 TRIAP1O43715 76 aa11.25□□□□□ -0.61
ATG9A-221ENST00000486766 C3orf22Q8N5N4 141 aa11.25□□□□□ -0.61
ATG9A-221ENST00000486766 SNCGO76070 127 aa11.23□□□□□ -0.61
ATG9A-221ENST00000486766 BATFQ16520 125 aa11.23□□□□□ -0.61
ATG9A-221ENST00000486766 IGLV9-49A0A0B4J1Y8 123 aa11.22□□□□□ -0.61
ATG9A-221ENST00000486766 TEX49A0A1B0GTD5 131 aa11.21□□□□□ -0.61
ATG9A-221ENST00000486766 COX6CP09669 75 aa11.21□□□□□ -0.61
ATG9A-221ENST00000486766 SPRR1BP22528 89 aa11.21□□□□□ -0.61
ATG9A-221ENST00000486766 Q6ZQY7 126 aa11.21□□□□□ -0.61
ATG9A-221ENST00000486766 IGLV5-48A0A075B6I7 105 aa11.19□□□□□ -0.62
ATG9A-221ENST00000486766 FAM218AQ96MZ4 157 aa11.19□□□□□ -0.62
ATG9A-221ENST00000486766 LINC01547P58512 204 aaPredicted RBP11.18□□□□□ -0.62
ATG9A-221ENST00000486766 MOBPQ13875 183 aa11.18□□□□□ -0.62
ATG9A-221ENST00000486766 C9orf153Q5TBE3 101 aa11.18□□□□□ -0.62
ATG9A-221ENST00000486766 LAMTOR3Q9UHA4 124 aa11.18□□□□□ -0.62
ATG9A-221ENST00000486766 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.17□□□□□ -0.62
ATG9A-221ENST00000486766 CLEC2BQ92478 149 aa11.17□□□□□ -0.62
ATG9A-221ENST00000486766 A0A1B0GX51 115 aa11.15□□□□□ -0.62
ATG9A-221ENST00000486766 SCGB1C2P0DMR2 95 aa11.15□□□□□ -0.62
ATG9A-221ENST00000486766 LINC00304Q8N9R0 145 aa11.15□□□□□ -0.62
ATG9A-221ENST00000486766 Q8N377 158 aa11.14□□□□□ -0.63
ATG9A-221ENST00000486766 Q8NBF4 154 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms