RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 OBSCN-AS1Q96MR7 158 aa7.45□□□□□ -1.22
U2AF1-211ENST00000486519 TMEM218A2RU14 115 aa7.44□□□□□ -1.22
U2AF1-211ENST00000486519 KRTAP2-3P0C7H8 128 aa7.44□□□□□ -1.22
U2AF1-211ENST00000486519 S100A1P23297 94 aa7.44□□□□□ -1.22
U2AF1-211ENST00000486519 KRTAP2-4Q9BYR9 128 aa7.44□□□□□ -1.22
U2AF1-211ENST00000486519 S100A12P80511 92 aa7.43□□□□□ -1.22
U2AF1-211ENST00000486519 SEC11CQ9BY50 192 aa7.43□□□□□ -1.22
U2AF1-211ENST00000486519 NDUFA6P56556 154 aa7.42□□□□□ -1.22
U2AF1-211ENST00000486519 SFTA2Q6UW10 78 aa7.42□□□□□ -1.22
U2AF1-211ENST00000486519 TRBV20-1A0A075B6N2 111 aa7.41□□□□□ -1.22
U2AF1-211ENST00000486519 JOSD1Q15040 202 aaPredicted RBP7.41□□□□□ -1.22
U2AF1-211ENST00000486519 LAMTOR3Q9UHA4 124 aa7.41□□□□□ -1.22
U2AF1-211ENST00000486519 MEIG1Q5JSS6 88 aa7.4□□□□□ -1.22
U2AF1-211ENST00000486519 TMEM170BQ5T4T1 132 aa7.4□□□□□ -1.22
U2AF1-211ENST00000486519 PRO1933Q9H354 126 aa7.4□□□□□ -1.22
U2AF1-211ENST00000486519 TRAV23DV6A0A075B6W5 121 aa7.39□□□□□ -1.23
U2AF1-211ENST00000486519 FAM236DA0A1B0GTK5 79 aa7.39□□□□□ -1.23
U2AF1-211ENST00000486519 LINC01546A6NGU7 62 aa7.39□□□□□ -1.23
U2AF1-211ENST00000486519 APOC3P02656 99 aa7.39□□□□□ -1.23
U2AF1-211ENST00000486519 FAM236CP0DP71 79 aa7.39□□□□□ -1.23
U2AF1-211ENST00000486519 SVBPQ8N300 66 aa7.39□□□□□ -1.23
U2AF1-211ENST00000486519 PCP2Q8IVA1 136 aa7.38□□□□□ -1.23
U2AF1-211ENST00000486519 TRBV10-2A0A0K0K1G8 114 aa7.37□□□□□ -1.23
U2AF1-211ENST00000486519 C5orf52A6NGY3 159 aa7.37□□□□□ -1.23
U2AF1-211ENST00000486519 ZNF73O43830 326 aaPredicted RBP7.37□□□□□ -1.23
U2AF1-211ENST00000486519 SNAPINO95295 136 aa7.37□□□□□ -1.23
U2AF1-211ENST00000486519 KRTAP5-9P26371 169 aa7.37□□□□□ -1.23
U2AF1-211ENST00000486519 Q8N9P0 234 aaPredicted RBP7.37□□□□□ -1.23
U2AF1-211ENST00000486519 A0A096LNJ9 63 aa7.36□□□□□ -1.23
U2AF1-211ENST00000486519 MT-ND4LP03901 98 aa7.36□□□□□ -1.23
U2AF1-211ENST00000486519 C10orf91Q5T1B1 145 aa7.36□□□□□ -1.23
U2AF1-211ENST00000486519 SLC25A34Q6PIV7 304 aa7.36□□□□□ -1.23
U2AF1-211ENST00000486519 RHEBQ15382 184 aa7.35□□□□□ -1.23
U2AF1-211ENST00000486519 ANAPC16Q96DE5 110 aa7.35□□□□□ -1.23
U2AF1-211ENST00000486519 TMEM223A0PJW6 202 aa7.34□□□□□ -1.23
U2AF1-211ENST00000486519 DEFB105AQ8NG35 78 aa7.34□□□□□ -1.23
U2AF1-211ENST00000486519 RPS10P5Q9NQ39 176 aa7.34□□□□□ -1.23
U2AF1-211ENST00000486519 LOC107984156A0A0G2JMH3 177 aa7.33□□□□□ -1.24
U2AF1-211ENST00000486519 KRTAP16-1A8MUX0 517 aa7.33□□□□□ -1.24
U2AF1-211ENST00000486519 AKR1D1P51857 326 aa7.33□□□□□ -1.24
U2AF1-211ENST00000486519 S100A7L2Q5SY68 101 aa7.33□□□□□ -1.24
U2AF1-211ENST00000486519 ARL17AQ8IVW1 177 aa7.33□□□□□ -1.24
U2AF1-211ENST00000486519 MPLKIPQ8TAP9 179 aa7.33□□□□□ -1.24
U2AF1-211ENST00000486519 SPANXB1Q9NS25 103 aaPredicted RBP7.33□□□□□ -1.24
U2AF1-211ENST00000486519 S100PP25815 95 aa7.32□□□□□ -1.24
U2AF1-211ENST00000486519 LINC01549A6NIU2 74 aa7.31□□□□□ -1.24
U2AF1-211ENST00000486519 EIF4EBP3O60516 100 aaPredicted RBP7.31□□□□□ -1.24
U2AF1-211ENST00000486519 HRES1P13985 223 aa7.3□□□□□ -1.24
U2AF1-211ENST00000486519 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
U2AF1-211ENST00000486519 Q96NJ1 140 aa7.3□□□□□ -1.24
U2AF1-211ENST00000486519 BAGE3Q86Y29 109 aa7.29□□□□□ -1.24
U2AF1-211ENST00000486519 C6orf99Q4VX62 202 aa7.28□□□□□ -1.24
U2AF1-211ENST00000486519 PMCHL1Q16048 86 aa7.27□□□□□ -1.25
U2AF1-211ENST00000486519 TAL2Q16559 108 aa7.27□□□□□ -1.25
U2AF1-211ENST00000486519 SMCO4Q9NRQ5 59 aa7.27□□□□□ -1.25
U2AF1-211ENST00000486519 TCL1BO95988 128 aa7.26□□□□□ -1.25
U2AF1-211ENST00000486519 HERV-K104P63124 156 aa7.26□□□□□ -1.25
U2AF1-211ENST00000486519 SOSTDC1Q6X4U4 206 aa7.26□□□□□ -1.25
U2AF1-211ENST00000486519 A8MUU9 505 aa7.25□□□□□ -1.25
U2AF1-211ENST00000486519 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
U2AF1-211ENST00000486519 IGFL1Q6UW32 110 aa7.25□□□□□ -1.25
U2AF1-211ENST00000486519 URB1-AS1Q96HZ7 61 aa7.25□□□□□ -1.25
U2AF1-211ENST00000486519 GPR98Q8WXG9 6306 aa7.24□□□□□ -1.25
U2AF1-211ENST00000486519 DHRS4-AS1Q9P1J3 65 aa7.24□□□□□ -1.25
U2AF1-211ENST00000486519 TEX49A0A1B0GTD5 131 aa7.23□□□□□ -1.25
U2AF1-211ENST00000486519 NPC2P61916 151 aa7.23□□□□□ -1.25
U2AF1-211ENST00000486519 NDUFC2O95298 119 aa7.22□□□□□ -1.25
U2AF1-211ENST00000486519 HBDP02042 147 aa7.22□□□□□ -1.25
U2AF1-211ENST00000486519 MAP1LC3CQ9BXW4 147 aa7.22□□□□□ -1.25
U2AF1-211ENST00000486519 COX19Q49B96 90 aa7.21□□□□□ -1.26
U2AF1-211ENST00000486519 A6NN06 94 aa7.2□□□□□ -1.26
U2AF1-211ENST00000486519 HINT1P49773 126 aaPredicted RBP7.2□□□□□ -1.26
U2AF1-211ENST00000486519 MYMXA0A1B0GTQ4 84 aa7.19□□□□□ -1.26
U2AF1-211ENST00000486519 RBM12B-AS1Q9P1G2 102 aa7.19□□□□□ -1.26
U2AF1-211ENST00000486519 LINC00587B1AMM8 73 aa7.18□□□□□ -1.26
U2AF1-211ENST00000486519 Q6ZVH6 145 aa7.18□□□□□ -1.26
U2AF1-211ENST00000486519 ELOF1P60002 83 aaKnown RBP7.17□□□□□ -1.26
U2AF1-211ENST00000486519 NOTCH2NLQ7Z3S9 236 aa7.16□□□□□ -1.26
U2AF1-211ENST00000486519 MIEN1Q9BRT3 115 aa7.16□□□□□ -1.26
U2AF1-211ENST00000486519 KRTAP2-2Q9BYT5 123 aa7.16□□□□□ -1.26
U2AF1-211ENST00000486519 KRTAP2-1Q9BYU5 128 aa7.16□□□□□ -1.26
U2AF1-211ENST00000486519 TRAPPC1Q9Y5R8 145 aa7.16□□□□□ -1.26
U2AF1-211ENST00000486519 LOC105371267A0A1B0GV96 52 aa7.15□□□□□ -1.26
U2AF1-211ENST00000486519 COX7BP24311 80 aa7.15□□□□□ -1.26
U2AF1-211ENST00000486519 IGLV5-48A0A075B6I7 105 aa7.14□□□□□ -1.27
U2AF1-211ENST00000486519 FABP9Q0Z7S8 132 aa7.14□□□□□ -1.27
U2AF1-211ENST00000486519 ADAMTSL4-AS1Q5T5F5 129 aa7.14□□□□□ -1.27
U2AF1-211ENST00000486519 YPEL4Q96NS1 127 aa7.14□□□□□ -1.27
U2AF1-211ENST00000486519 COLCA2A8K830 154 aa7.13□□□□□ -1.27
U2AF1-211ENST00000486519 A8MWP4 228 aa7.12□□□□□ -1.27
U2AF1-211ENST00000486519 TRBV7-7A0A0K0K1E9 115 aa7.11□□□□□ -1.27
U2AF1-211ENST00000486519 OR13C6PQ8NH95 151 aa7.11□□□□□ -1.27
U2AF1-211ENST00000486519 TMA7Q9Y2S6 64 aaKnown RBP7.11□□□□□ -1.27
U2AF1-211ENST00000486519 TRGC2P03986 189 aa7.09□□□□□ -1.27
U2AF1-211ENST00000486519 LINC00614P0C842 121 aa7.08□□□□□ -1.28
U2AF1-211ENST00000486519 SPRR2EP22531 72 aa7.08□□□□□ -1.28
U2AF1-211ENST00000486519 SPRR2BP35325 72 aa7.08□□□□□ -1.28
U2AF1-211ENST00000486519 SPRR2AP35326 72 aa7.08□□□□□ -1.28
U2AF1-211ENST00000486519 TRAV12-1A0A0B4J245 112 aa7.07□□□□□ -1.28
U2AF1-211ENST00000486519 LEPROTO15243 131 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms