RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 H0YGX0 51 aa6.04□□□□□ -1.44
TMEM39A-208ENST00000486159 K7ERU9 68 aa6.04□□□□□ -1.44
TMEM39A-208ENST00000486159 IGKV2D-28P01615 120 aa6.04□□□□□ -1.44
TMEM39A-208ENST00000486159 C15orf56Q8N910 161 aa6.04□□□□□ -1.44
TMEM39A-208ENST00000486159 TRBV10-2A0A0K0K1G8 114 aa6.03□□□□□ -1.44
TMEM39A-208ENST00000486159 LST1O00453 97 aa6.03□□□□□ -1.44
TMEM39A-208ENST00000486159 PLA2G1BP04054 148 aaKnown RBP6.03□□□□□ -1.44
TMEM39A-208ENST00000486159 OCIAD2Q56VL3 154 aa6.03□□□□□ -1.44
TMEM39A-208ENST00000486159 C10orf25Q5T742 122 aa6.03□□□□□ -1.44
TMEM39A-208ENST00000486159 LINC00337Q8N6G1 96 aa6.03□□□□□ -1.44
TMEM39A-208ENST00000486159 CARD19Q96LW7 228 aa6.03□□□□□ -1.44
TMEM39A-208ENST00000486159 TMEM126AQ9H061 195 aa6.03□□□□□ -1.44
TMEM39A-208ENST00000486159 C6orf48Q9UBA6 75 aa6.03□□□□□ -1.44
TMEM39A-208ENST00000486159 CBY1Q9Y3M2 126 aa6.03□□□□□ -1.44
TMEM39A-208ENST00000486159 PANO1I0J062 215 aa6.02□□□□□ -1.45
TMEM39A-208ENST00000486159 J3QR89 54 aa6.02□□□□□ -1.45
TMEM39A-208ENST00000486159 TRACP01848 142 aa6.02□□□□□ -1.45
TMEM39A-208ENST00000486159 CDIP1Q9H305 208 aa6.02□□□□□ -1.45
TMEM39A-208ENST00000486159 NDUFC2-KCTD14E9PQ53 114 aa6.01□□□□□ -1.45
TMEM39A-208ENST00000486159 H3BT86 120 aa6.01□□□□□ -1.45
TMEM39A-208ENST00000486159 SYCNQ0VAF6 134 aa6.01□□□□□ -1.45
TMEM39A-208ENST00000486159 A0A1B0GX51 115 aa6□□□□□ -1.45
TMEM39A-208ENST00000486159 C9JAW5 83 aa6□□□□□ -1.45
TMEM39A-208ENST00000486159 USP17L23D6RBM5 183 aa6□□□□□ -1.45
TMEM39A-208ENST00000486159 SLC25A20O43772 301 aa6□□□□□ -1.45
TMEM39A-208ENST00000486159 TLX1NBP0CAT3 122 aa6□□□□□ -1.45
TMEM39A-208ENST00000486159 HIGD2BQ4VC39 106 aa6□□□□□ -1.45
TMEM39A-208ENST00000486159 C9orf116Q5BN46 136 aaPredicted RBP6□□□□□ -1.45
TMEM39A-208ENST00000486159 OR13C6PQ8NH95 151 aa6□□□□□ -1.45
TMEM39A-208ENST00000486159 SNCGO76070 127 aa5.99□□□□□ -1.45
TMEM39A-208ENST00000486159 Q6ZRU5 148 aa5.99□□□□□ -1.45
TMEM39A-208ENST00000486159 TEN1Q86WV5 123 aa5.99□□□□□ -1.45
TMEM39A-208ENST00000486159 ANKRD29Q8N6D5 301 aa5.99□□□□□ -1.45
TMEM39A-208ENST00000486159 SMIM11BQ8TCY0 68 aa5.99□□□□□ -1.45
TMEM39A-208ENST00000486159 LINC00526Q96FQ7 95 aa5.99□□□□□ -1.45
TMEM39A-208ENST00000486159 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
TMEM39A-208ENST00000486159 ETDBQ3ZM63 59 aa5.98□□□□□ -1.45
TMEM39A-208ENST00000486159 C14orf177Q52M58 125 aa5.98□□□□□ -1.45
TMEM39A-208ENST00000486159 S100A7L2Q5SY68 101 aa5.98□□□□□ -1.45
TMEM39A-208ENST00000486159 PPDPFLQ8WWR9 84 aa5.97□□□□□ -1.45
TMEM39A-208ENST00000486159 CLEC2BQ92478 149 aa5.97□□□□□ -1.45
TMEM39A-208ENST00000486159 PKIGQ9Y2B9 76 aa5.97□□□□□ -1.45
TMEM39A-208ENST00000486159 MUC2Q02817 5179 aa5.96□□□□□ -1.45
TMEM39A-208ENST00000486159 IGLV6-57P01721 117 aa5.96□□□□□ -1.46
TMEM39A-208ENST00000486159 SLPIP03973 132 aa5.96□□□□□ -1.46
TMEM39A-208ENST00000486159 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.46
TMEM39A-208ENST00000486159 TRBV7-6A0A0J9YX20 115 aa5.95□□□□□ -1.46
TMEM39A-208ENST00000486159 M0R378 163 aa5.95□□□□□ -1.46
TMEM39A-208ENST00000486159 DNAL4O96015 105 aa5.95□□□□□ -1.46
TMEM39A-208ENST00000486159 RPL37AP61513 92 aaKnown RBP5.95□□□□□ -1.46
TMEM39A-208ENST00000486159 C9orf163Q8N9P6 203 aa5.95□□□□□ -1.46
TMEM39A-208ENST00000486159 LOC107984640A0A0U1RRK4 108 aa5.94□□□□□ -1.46
TMEM39A-208ENST00000486159 H3BQ85 93 aa5.94□□□□□ -1.46
TMEM39A-208ENST00000486159 NCR3O14931 201 aa5.94□□□□□ -1.46
TMEM39A-208ENST00000486159 CHTF8P0CG12 524 aa5.94□□□□□ -1.46
TMEM39A-208ENST00000486159 VPREB1P12018 145 aa5.94□□□□□ -1.46
TMEM39A-208ENST00000486159 SDIM1Q6ZPB5 146 aa5.94□□□□□ -1.46
TMEM39A-208ENST00000486159 MTURNQ8N3F0 131 aa5.94□□□□□ -1.46
TMEM39A-208ENST00000486159 OXTP01178 125 aa5.93□□□□□ -1.46
TMEM39A-208ENST00000486159 MT1HL1P0DM35 61 aa5.93□□□□□ -1.46
TMEM39A-208ENST00000486159 CNBPP62633 177 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-208ENST00000486159 PRR3P79522 188 aaKnown RBP5.93□□□□□ -1.46
TMEM39A-208ENST00000486159 Q6ZRP5 223 aa5.93□□□□□ -1.46
TMEM39A-208ENST00000486159 XAGE1AQ9HD64 81 aa5.93□□□□□ -1.46
TMEM39A-208ENST00000486159 IGLV5-37A0A075B6J1 123 aa5.92□□□□□ -1.46
TMEM39A-208ENST00000486159 BAALC-AS2P0C853 105 aa5.92□□□□□ -1.46
TMEM39A-208ENST00000486159 RPL18AQ02543 176 aaKnown RBP5.92□□□□□ -1.46
TMEM39A-208ENST00000486159 SERTAD4-AS1Q5TG53 156 aa5.92□□□□□ -1.46
TMEM39A-208ENST00000486159 Q8NDZ9 215 aa5.92□□□□□ -1.46
TMEM39A-208ENST00000486159 TRAV23DV6A0A075B6W5 121 aa5.91□□□□□ -1.46
TMEM39A-208ENST00000486159 GAGE2EQ4V326 116 aa5.91□□□□□ -1.46
TMEM39A-208ENST00000486159 C6orf99Q4VX62 202 aa5.91□□□□□ -1.46
TMEM39A-208ENST00000486159 NKAPP1Q8N9T2 125 aa5.91□□□□□ -1.46
TMEM39A-208ENST00000486159 DIRC1Q969H9 104 aa5.91□□□□□ -1.46
TMEM39A-208ENST00000486159 FAM218AQ96MZ4 157 aa5.91□□□□□ -1.46
TMEM39A-208ENST00000486159 LINC00167Q96N53 147 aa5.91□□□□□ -1.46
TMEM39A-208ENST00000486159 GAGE2DQ9UEU5 116 aa5.91□□□□□ -1.46
TMEM39A-208ENST00000486159 TRBV10-3A0A0K0K1G6 114 aa5.9□□□□□ -1.46
TMEM39A-208ENST00000486159 C9orf129Q5T035 196 aaKnown RBP5.9□□□□□ -1.46
TMEM39A-208ENST00000486159 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.47
TMEM39A-208ENST00000486159 A0A087WYN8 130 aa5.89□□□□□ -1.47
TMEM39A-208ENST00000486159 ZNF73O43830 326 aaPredicted RBP5.89□□□□□ -1.47
TMEM39A-208ENST00000486159 LINC00575Q6W349 94 aa5.89□□□□□ -1.47
TMEM39A-208ENST00000486159 VPS25Q9BRG1 176 aa5.89□□□□□ -1.47
TMEM39A-208ENST00000486159 ORMDL1Q9P0S3 153 aa5.89□□□□□ -1.47
TMEM39A-208ENST00000486159 TNXBP22105 4242 aa5.89□□□□□ -1.47
TMEM39A-208ENST00000486159 TMEM256-PLSCR3K7ERE1 68 aa5.88□□□□□ -1.47
TMEM39A-208ENST00000486159 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
TMEM39A-208ENST00000486159 DPH3Q96FX2 82 aa5.88□□□□□ -1.47
TMEM39A-208ENST00000486159 KCNQ1DNQ9H478 68 aa5.88□□□□□ -1.47
TMEM39A-208ENST00000486159 FAM240AA0A1B0GVK7 77 aa5.87□□□□□ -1.47
TMEM39A-208ENST00000486159 hADV29S1A0JD25 119 aa5.87□□□□□ -1.47
TMEM39A-208ENST00000486159 COX7BP24311 80 aa5.87□□□□□ -1.47
TMEM39A-208ENST00000486159 TEX49A0A1B0GTD5 131 aa5.86□□□□□ -1.47
TMEM39A-208ENST00000486159 PRYO14603 147 aa5.86□□□□□ -1.47
TMEM39A-208ENST00000486159 ACYP1P07311 99 aa5.86□□□□□ -1.47
TMEM39A-208ENST00000486159 ELOF1P60002 83 aaKnown RBP5.86□□□□□ -1.47
TMEM39A-208ENST00000486159 GAGE2BQ13066 116 aa5.86□□□□□ -1.47
TMEM39A-208ENST00000486159 SPACA4Q8TDM5 124 aa5.86□□□□□ -1.47
TMEM39A-208ENST00000486159 KRTAP4-12Q9BQ66 201 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms