RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 HIST1H4GQ99525 98 aa14.31□□□□□ -0.12
ABCF3-216ENST00000485921 HIGD1BQ9P298 99 aa14.3□□□□□ -0.12
ABCF3-216ENST00000485921 TRAV23DV6A0A075B6W5 121 aa14.29□□□□□ -0.12
ABCF3-216ENST00000485921 ETDCA0A1B0GVM5 59 aa14.28□□□□□ -0.12
ABCF3-216ENST00000485921 KRTAP4-16G5E9R7 235 aaPredicted RBP14.27□□□□□ -0.13
ABCF3-216ENST00000485921 C2orf91Q6ZV80 131 aa14.27□□□□□ -0.13
ABCF3-216ENST00000485921 CBY1Q9Y3M2 126 aa14.27□□□□□ -0.13
ABCF3-216ENST00000485921 A4D1N5 150 aa14.25□□□□□ -0.13
ABCF3-216ENST00000485921 A6NDN8 102 aa14.24□□□□□ -0.13
ABCF3-216ENST00000485921 J3QL48 77 aa14.24□□□□□ -0.13
ABCF3-216ENST00000485921 ZNF73O43830 326 aaPredicted RBP14.24□□□□□ -0.13
ABCF3-216ENST00000485921 LINC01600Q96MT4 127 aa14.23□□□□□ -0.13
ABCF3-216ENST00000485921 TRAV13-2A0A0B4J235 113 aa14.22□□□□□ -0.13
ABCF3-216ENST00000485921 B5MCH6 92 aa14.22□□□□□ -0.13
ABCF3-216ENST00000485921 HIGD2AQ9BW72 106 aa14.22□□□□□ -0.13
ABCF3-216ENST00000485921 LOC105371267A0A1B0GV96 52 aa14.21□□□□□ -0.13
ABCF3-216ENST00000485921 KRTAP1-4P0C5Y4 121 aa14.19□□□□□ -0.14
ABCF3-216ENST00000485921 SMIM6P0DI80 62 aa14.19□□□□□ -0.14
ABCF3-216ENST00000485921 UQCR10Q9UDW1 63 aa14.19□□□□□ -0.14
ABCF3-216ENST00000485921 TAL2Q16559 108 aa14.18□□□□□ -0.14
ABCF3-216ENST00000485921 HINT1P49773 126 aaPredicted RBP14.17□□□□□ -0.14
ABCF3-216ENST00000485921 Q6ZRX8 168 aa14.17□□□□□ -0.14
ABCF3-216ENST00000485921 MT1HL1P0DM35 61 aa14.16□□□□□ -0.14
ABCF3-216ENST00000485921 C12orf57Q99622 126 aa14.16□□□□□ -0.14
ABCF3-216ENST00000485921 SMCR5Q8TEV8 140 aa14.15□□□□□ -0.14
ABCF3-216ENST00000485921 DMBT1Q9UGM3 2413 aaPredicted RBP14.14□□□□□ -0.15
ABCF3-216ENST00000485921 C6orf99Q4VX62 202 aa14.14□□□□□ -0.15
ABCF3-216ENST00000485921 CEND1Q8N111 149 aa14.14□□□□□ -0.15
ABCF3-216ENST00000485921 TNXBP22105 4242 aa14.14□□□□□ -0.15
ABCF3-216ENST00000485921 Q9BRP9 147 aa14.13□□□□□ -0.15
ABCF3-216ENST00000485921 PRR26Q8N8Z3 221 aa14.12□□□□□ -0.15
ABCF3-216ENST00000485921 KRTAP10-8P60410 259 aa14.11□□□□□ -0.15
ABCF3-216ENST00000485921 SMIM11BQ8TCY0 68 aa14.11□□□□□ -0.15
ABCF3-216ENST00000485921 PRO1933Q9H354 126 aa14.11□□□□□ -0.15
ABCF3-216ENST00000485921 CFC1BP0CG36 223 aa14.09□□□□□ -0.15
ABCF3-216ENST00000485921 CFC1P0CG37 223 aa14.09□□□□□ -0.15
ABCF3-216ENST00000485921 COX7BP24311 80 aa14.09□□□□□ -0.15
ABCF3-216ENST00000485921 RPL13AP40429 203 aaKnown RBP14.09□□□□□ -0.15
ABCF3-216ENST00000485921 HSD52Q0P140 79 aa14.09□□□□□ -0.15
ABCF3-216ENST00000485921 ANAPC11Q9NYG5 84 aa14.09□□□□□ -0.15
ABCF3-216ENST00000485921 TRBV7-6A0A0J9YX20 115 aa14.08□□□□□ -0.16
ABCF3-216ENST00000485921 ERC2-IT1O76042 136 aa14.08□□□□□ -0.16
ABCF3-216ENST00000485921 ELOF1P60002 83 aaKnown RBP14.07□□□□□ -0.16
ABCF3-216ENST00000485921 SPRR4Q96PI1 79 aa14.07□□□□□ -0.16
ABCF3-216ENST00000485921 ZNF706Q9Y5V0 76 aaPredicted RBP14.07□□□□□ -0.16
ABCF3-216ENST00000485921 TMEM238LA0A1B0GVL6 79 aa14.06□□□□□ -0.16
ABCF3-216ENST00000485921 A6NJY4 79 aa14.06□□□□□ -0.16
ABCF3-216ENST00000485921 FXYD2P54710 66 aa14.06□□□□□ -0.16
ABCF3-216ENST00000485921 RAB37Q96AX2 223 aa14.06□□□□□ -0.16
ABCF3-216ENST00000485921 A0A0B4J2C4 111 aa14.05□□□□□ -0.16
ABCF3-216ENST00000485921 A0A1B0GWB2 263 aa14.04□□□□□ -0.16
ABCF3-216ENST00000485921 CRYGAP11844 174 aa14.04□□□□□ -0.16
ABCF3-216ENST00000485921 FAM229BQ4G0N7 80 aa14.04□□□□□ -0.16
ABCF3-216ENST00000485921 DHRS4-AS1Q9P1J3 65 aa14.04□□□□□ -0.16
ABCF3-216ENST00000485921 A0A087X002 238 aa14.03□□□□□ -0.16
ABCF3-216ENST00000485921 H7C2G1 150 aa14□□□□□ -0.17
ABCF3-216ENST00000485921 VAMP3Q15836 100 aa13.99□□□□□ -0.17
ABCF3-216ENST00000485921 GAGE2AQ6NT46 116 aa13.99□□□□□ -0.17
ABCF3-216ENST00000485921 HERC1Q15751 4861 aa13.98□□□□□ -0.17
ABCF3-216ENST00000485921 ST20-AS1Q8NBB2 130 aa13.97□□□□□ -0.17
ABCF3-216ENST00000485921 PRO1854Q9UHT4 67 aa13.97□□□□□ -0.17
ABCF3-216ENST00000485921 KRTAP13-2Q52LG2 175 aa13.96□□□□□ -0.17
ABCF3-216ENST00000485921 LINC00483Q53H64 154 aa13.96□□□□□ -0.17
ABCF3-216ENST00000485921 NHP2Q9NX24 153 aaKnown RBP13.96□□□□□ -0.17
ABCF3-216ENST00000485921 TYMSOSQ8TAI1 123 aa13.95□□□□□ -0.18
ABCF3-216ENST00000485921 TSTD3H0UI37 97 aa13.93□□□□□ -0.18
ABCF3-216ENST00000485921 Q1RN00 199 aa13.93□□□□□ -0.18
ABCF3-216ENST00000485921 BVES-AS1Q5T3Y7 98 aa13.93□□□□□ -0.18
ABCF3-216ENST00000485921 CTAG1AP78358 180 aa13.92□□□□□ -0.18
ABCF3-216ENST00000485921 C3orf22Q8N5N4 141 aa13.91□□□□□ -0.18
ABCF3-216ENST00000485921 K7ERJ3 54 aa13.9□□□□□ -0.18
ABCF3-216ENST00000485921 SLC25A20O43772 301 aa13.9□□□□□ -0.18
ABCF3-216ENST00000485921 LINC00575Q6W349 94 aa13.9□□□□□ -0.18
ABCF3-216ENST00000485921 DEFB105AQ8NG35 78 aa13.86□□□□□ -0.19
ABCF3-216ENST00000485921 SPRR1BP22528 89 aa13.85□□□□□ -0.19
ABCF3-216ENST00000485921 hADV29S1A0JD25 119 aa13.84□□□□□ -0.19
ABCF3-216ENST00000485921 M0R143 59 aa13.84□□□□□ -0.19
ABCF3-216ENST00000485921 IGLV9-49A0A0B4J1Y8 123 aa13.82□□□□□ -0.2
ABCF3-216ENST00000485921 H0YGX0 51 aa13.82□□□□□ -0.2
ABCF3-216ENST00000485921 TEX49A0A1B0GTD5 131 aa13.81□□□□□ -0.2
ABCF3-216ENST00000485921 IGLV5-48A0A075B6I7 105 aa13.8□□□□□ -0.2
ABCF3-216ENST00000485921 TRIAP1O43715 76 aa13.8□□□□□ -0.2
ABCF3-216ENST00000485921 LINC01547P58512 204 aaPredicted RBP13.8□□□□□ -0.2
ABCF3-216ENST00000485921 TSPAN13O95857 204 aa13.79□□□□□ -0.2
ABCF3-216ENST00000485921 MOBPQ13875 183 aa13.79□□□□□ -0.2
ABCF3-216ENST00000485921 PSMB2P49721 201 aa13.78□□□□□ -0.2
ABCF3-216ENST00000485921 LINC00304Q8N9R0 145 aa13.78□□□□□ -0.2
ABCF3-216ENST00000485921 LAMTOR3Q9UHA4 124 aa13.78□□□□□ -0.2
ABCF3-216ENST00000485921 Q6ZQY7 126 aa13.77□□□□□ -0.21
ABCF3-216ENST00000485921 FAM218AQ96MZ4 157 aa13.76□□□□□ -0.21
ABCF3-216ENST00000485921 SNCGO76070 127 aa13.75□□□□□ -0.21
ABCF3-216ENST00000485921 C9orf153Q5TBE3 101 aa13.75□□□□□ -0.21
ABCF3-216ENST00000485921 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.75□□□□□ -0.21
ABCF3-216ENST00000485921 SSBP3-AS1Q7Z2R9 100 aa13.75□□□□□ -0.21
ABCF3-216ENST00000485921 Q8N377 158 aa13.75□□□□□ -0.21
ABCF3-216ENST00000485921 Q8NBF4 154 aa13.75□□□□□ -0.21
ABCF3-216ENST00000485921 COX6CP09669 75 aa13.72□□□□□ -0.21
ABCF3-216ENST00000485921 SMIM29Q86T20 159 aa13.72□□□□□ -0.21
ABCF3-216ENST00000485921 A0A1B0GX51 115 aa13.69□□□□□ -0.22
ABCF3-216ENST00000485921 BATFQ16520 125 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms