RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 A0A1B0GXF2 115 aa3.32□□□□□ -1.88
SMC4-217ENST00000485867 SMIM27A0A1W2PRY6 76 aa3.32□□□□□ -1.88
SMC4-217ENST00000485867 COX17Q14061 63 aa3.32□□□□□ -1.88
SMC4-217ENST00000485867 ORMDL2Q53FV1 153 aa3.32□□□□□ -1.88
SMC4-217ENST00000485867 MRPL54Q6P161 138 aaKnown RBP3.32□□□□□ -1.88
SMC4-217ENST00000485867 HRCT1Q6UXD1 115 aa3.32□□□□□ -1.88
SMC4-217ENST00000485867 TMEM136Q6ZRR5 245 aa3.32□□□□□ -1.88
SMC4-217ENST00000485867 Q8N8P6 123 aa3.32□□□□□ -1.88
SMC4-217ENST00000485867 Q9BRP9 147 aa3.32□□□□□ -1.88
SMC4-217ENST00000485867 CHTOPQ9Y3Y2 248 aaKnown RBP3.32□□□□□ -1.88
SMC4-217ENST00000485867 C20orf202A1L168 122 aa3.31□□□□□ -1.88
SMC4-217ENST00000485867 S100A8P05109 93 aa3.31□□□□□ -1.88
SMC4-217ENST00000485867 ZNF625Q96I27 306 aaPredicted RBP3.31□□□□□ -1.88
SMC4-217ENST00000485867 MAP1LC3AQ9H492 121 aa3.31□□□□□ -1.88
SMC4-217ENST00000485867 BATF3Q9NR55 127 aa3.31□□□□□ -1.88
SMC4-217ENST00000485867 TRAV9-1A0A075B6T8 112 aa3.3□□□□□ -1.88
SMC4-217ENST00000485867 LAMTOR2Q9Y2Q5 125 aa3.3□□□□□ -1.88
SMC4-217ENST00000485867 TRBV10-3A0A0K0K1G6 114 aa3.29□□□□□ -1.88
SMC4-217ENST00000485867 K7EMI3 77 aa3.29□□□□□ -1.88
SMC4-217ENST00000485867 NCR3O14931 201 aa3.29□□□□□ -1.88
SMC4-217ENST00000485867 C1orf195Q5TG92 126 aa3.29□□□□□ -1.88
SMC4-217ENST00000485867 TOMM6Q96B49 74 aa3.29□□□□□ -1.88
SMC4-217ENST00000485867 H3BRM9 83 aa3.28□□□□□ -1.88
SMC4-217ENST00000485867 RPL23P62829 140 aaKnown RBP3.28□□□□□ -1.88
SMC4-217ENST00000485867 Q6ZRX8 168 aa3.28□□□□□ -1.88
SMC4-217ENST00000485867 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
SMC4-217ENST00000485867 ERASQ7Z444 233 aa3.28□□□□□ -1.88
SMC4-217ENST00000485867 LGALS3P17931 250 aaKnown RBP3.27□□□□□ -1.89
SMC4-217ENST00000485867 ADCYAP1P18509 176 aa3.27□□□□□ -1.89
SMC4-217ENST00000485867 BOD1L2Q8IYS8 172 aa3.27□□□□□ -1.89
SMC4-217ENST00000485867 ST20-AS1Q8NBB2 130 aa3.27□□□□□ -1.89
SMC4-217ENST00000485867 CST9LQ9H4G1 147 aa3.27□□□□□ -1.89
SMC4-217ENST00000485867 H7C2G1 150 aa3.26□□□□□ -1.89
SMC4-217ENST00000485867 SRP19P09132 144 aaKnown RBP3.26□□□□□ -1.89
SMC4-217ENST00000485867 G0S2P27469 103 aa3.26□□□□□ -1.89
SMC4-217ENST00000485867 LINC00158P58513 81 aa3.26□□□□□ -1.89
SMC4-217ENST00000485867 CD164Q04900 197 aa3.26□□□□□ -1.89
SMC4-217ENST00000485867 ADIRFQ15847 76 aa3.26□□□□□ -1.89
SMC4-217ENST00000485867 Q5XG85 94 aa3.26□□□□□ -1.89
SMC4-217ENST00000485867 ATP11AUNQ6ZP68 121 aa3.26□□□□□ -1.89
SMC4-217ENST00000485867 ATP5L2Q7Z4Y8 100 aa3.26□□□□□ -1.89
SMC4-217ENST00000485867 SCGB3A1Q96QR1 104 aa3.26□□□□□ -1.89
SMC4-217ENST00000485867 NXT2Q9NPJ8 142 aaKnown RBP3.26□□□□□ -1.89
SMC4-217ENST00000485867 KMT2DO14686 5537 aa3.25□□□□□ -1.89
SMC4-217ENST00000485867 A0A0U1RRA0 63 aa3.25□□□□□ -1.89
SMC4-217ENST00000485867 ZNF22P17026 224 aaPredicted RBP3.25□□□□□ -1.89
SMC4-217ENST00000485867 S100A12P80511 92 aa3.25□□□□□ -1.89
SMC4-217ENST00000485867 PMVKQ15126 192 aa3.25□□□□□ -1.89
SMC4-217ENST00000485867 SFTA2Q6UW10 78 aa3.25□□□□□ -1.89
SMC4-217ENST00000485867 A8MU10 97 aa3.24□□□□□ -1.89
SMC4-217ENST00000485867 IGLC3P0DOY3 106 aa3.24□□□□□ -1.89
SMC4-217ENST00000485867 SPRR1BP22528 89 aa3.24□□□□□ -1.89
SMC4-217ENST00000485867 ALKAL2Q6UX46 152 aa3.24□□□□□ -1.89
SMC4-217ENST00000485867 SLC51BQ86UW2 128 aa3.24□□□□□ -1.89
SMC4-217ENST00000485867 C20orf166-AS1Q96NR2 134 aa3.24□□□□□ -1.89
SMC4-217ENST00000485867 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
SMC4-217ENST00000485867 TRBV20-1A0A075B6N2 111 aa3.23□□□□□ -1.89
SMC4-217ENST00000485867 C5orf52A6NGY3 159 aa3.23□□□□□ -1.89
SMC4-217ENST00000485867 DDTP30046 118 aa3.23□□□□□ -1.89
SMC4-217ENST00000485867 JOSD1Q15040 202 aaPredicted RBP3.23□□□□□ -1.89
SMC4-217ENST00000485867 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
SMC4-217ENST00000485867 SMIM13P0DJ93 91 aa3.22□□□□□ -1.89
SMC4-217ENST00000485867 Q1RN00 199 aa3.22□□□□□ -1.89
SMC4-217ENST00000485867 SLC25A34Q6PIV7 304 aa3.22□□□□□ -1.89
SMC4-217ENST00000485867 MIR7-3HGQ8N6C7 128 aa3.22□□□□□ -1.89
SMC4-217ENST00000485867 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
SMC4-217ENST00000485867 NAT8Q9UHE5 227 aa3.22□□□□□ -1.89
SMC4-217ENST00000485867 LINC01549A6NIU2 74 aa3.21□□□□□ -1.9
SMC4-217ENST00000485867 ATP6V1G1O75348 118 aa3.21□□□□□ -1.9
SMC4-217ENST00000485867 UBE2V1Q13404 147 aa3.21□□□□□ -1.9
SMC4-217ENST00000485867 C10orf91Q5T1B1 145 aa3.21□□□□□ -1.9
SMC4-217ENST00000485867 PRO1933Q9H354 126 aa3.21□□□□□ -1.9
SMC4-217ENST00000485867 LAMTOR3Q9UHA4 124 aa3.21□□□□□ -1.9
SMC4-217ENST00000485867 TRBV10-2A0A0K0K1G8 114 aa3.2□□□□□ -1.9
SMC4-217ENST00000485867 FAM236DA0A1B0GTK5 79 aa3.2□□□□□ -1.9
SMC4-217ENST00000485867 FAM236CP0DP71 79 aa3.2□□□□□ -1.9
SMC4-217ENST00000485867 C6orf99Q4VX62 202 aa3.2□□□□□ -1.9
SMC4-217ENST00000485867 KRTAP5-5Q701N2 237 aaPredicted RBP3.2□□□□□ -1.9
SMC4-217ENST00000485867 FA2HQ7L5A8 372 aa3.2□□□□□ -1.9
SMC4-217ENST00000485867 TRAV23DV6A0A075B6W5 121 aa3.19□□□□□ -1.9
SMC4-217ENST00000485867 C11orf86A6NJI1 115 aa3.19□□□□□ -1.9
SMC4-217ENST00000485867 SCGB1D1O95968 90 aa3.19□□□□□ -1.9
SMC4-217ENST00000485867 OBSCN-AS1Q96MR7 158 aa3.19□□□□□ -1.9
SMC4-217ENST00000485867 A0A0G2JQZ4 141 aa3.18□□□□□ -1.9
SMC4-217ENST00000485867 LINC01546A6NGU7 62 aa3.18□□□□□ -1.9
SMC4-217ENST00000485867 C9JQL5 133 aa3.18□□□□□ -1.9
SMC4-217ENST00000485867 ZNF73O43830 326 aaPredicted RBP3.18□□□□□ -1.9
SMC4-217ENST00000485867 MEIG1Q5JSS6 88 aa3.18□□□□□ -1.9
SMC4-217ENST00000485867 TMEM170BQ5T4T1 132 aa3.18□□□□□ -1.9
SMC4-217ENST00000485867 SPANXB1Q9NS25 103 aaPredicted RBP3.18□□□□□ -1.9
SMC4-217ENST00000485867 LOC107984156A0A0G2JMH3 177 aa3.17□□□□□ -1.9
SMC4-217ENST00000485867 AKR1D1P51857 326 aa3.17□□□□□ -1.9
SMC4-217ENST00000485867 NDUFA6P56556 154 aa3.17□□□□□ -1.9
SMC4-217ENST00000485867 RGS21Q2M5E4 152 aa3.17□□□□□ -1.9
SMC4-217ENST00000485867 PCP2Q8IVA1 136 aa3.17□□□□□ -1.9
SMC4-217ENST00000485867 ARL17AQ8IVW1 177 aa3.17□□□□□ -1.9
SMC4-217ENST00000485867 TCL1BO95988 128 aa3.16□□□□□ -1.9
SMC4-217ENST00000485867 S100A7L2Q5SY68 101 aa3.16□□□□□ -1.9
SMC4-217ENST00000485867 HERV-K104P63124 156 aa3.15□□□□□ -1.91
SMC4-217ENST00000485867 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms