RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 MAP1AP78559 2803 aaPredicted RBP3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 ZANQ9Y493 2812 aa3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 IGLV5-37A0A075B6J1 123 aa3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 hDV103S1A0JD37 113 aa3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 FAM229BQ4G0N7 80 aa3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 HIGD2BQ4VC39 106 aa3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 Q6ZRU5 148 aa3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 DHRS4-AS1Q9P1J3 65 aa3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 SPG11Q96JI7 2443 aa3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 UBR5O95071 2799 aaPredicted RBP3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 USP9YO00507 2555 aaPredicted RBP3.05□□□□□ -1.92
SMARCC1-206ENST00000485737 NOTCH3Q9UM47 2321 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 KRTAP4-16G5E9R7 235 aaPredicted RBP3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 TLX1NBP0CAT3 122 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 SPRR1AP35321 89 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 KPRPQ5T749 579 aaPredicted RBP3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 Q8N377 158 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 Q8N9L7 120 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 Q8NBF4 154 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 SPRR4Q96PI1 79 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 MYO9AB2RTY4 2548 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 NCOR2Q9Y618 2525 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 C2CD3Q4AC94 2353 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 FLNCQ14315 2725 aa3.04□□□□□ -1.92
SMARCC1-206ENST00000485737 CHD6Q8TD26 2715 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 CHD8Q9HCK8 2581 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 A0A1W2PNM2 257 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 DEFB4AO15263 64 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 Q1T7F1 81 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 Q6ZRX8 168 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 SMIM29Q86T20 159 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 C7orf33Q8WU49 177 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 HIGD2AQ9BW72 106 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 CYP4F30PQ9H0H9 118 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 CACNA1AO00555 2505 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 NAV2Q8IVL1 2488 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 WNK1Q9H4A3 2382 aa3.03□□□□□ -1.92
SMARCC1-206ENST00000485737 IGSF10Q6WRI0 2623 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 ETDCA0A1B0GVM5 59 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 C3orf84H3BNL1 204 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 PRB1P04280 392 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 SYCNQ0VAF6 134 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 LINC01556Q5JQF7 62 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 Q6ZRP5 223 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 WFDC10BQ8IUB3 73 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 PRR15Q8IV56 129 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 NKAPP1Q8N9T2 125 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 EPG5Q9HCE0 2579 aa3.02□□□□□ -1.93
SMARCC1-206ENST00000485737 NBPF19A0A087WUL8 3843 aa3.01□□□□□ -1.93
SMARCC1-206ENST00000485737 HTN3P15516 51 aa3.01□□□□□ -1.93
SMARCC1-206ENST00000485737 DSCR10P59022 87 aa3.01□□□□□ -1.93
SMARCC1-206ENST00000485737 C1orf137Q5JT78 98 aa3.01□□□□□ -1.93
SMARCC1-206ENST00000485737 SERTAD4-AS1Q5TG53 156 aa3.01□□□□□ -1.93
SMARCC1-206ENST00000485737 C1orf195Q5TG92 126 aa3.01□□□□□ -1.93
SMARCC1-206ENST00000485737 Q9BRP9 147 aa3.01□□□□□ -1.93
SMARCC1-206ENST00000485737 TLN2Q9Y4G6 2542 aa3.01□□□□□ -1.93
SMARCC1-206ENST00000485737 POLQO75417 2590 aa3.01□□□□□ -1.93
SMARCC1-206ENST00000485737 JMJD1CQ15652 2540 aa3□□□□□ -1.93
SMARCC1-206ENST00000485737 UTP20O75691 2785 aaKnown RBP3□□□□□ -1.93
SMARCC1-206ENST00000485737 IGLV1-50A0A075B6I6 118 aa3□□□□□ -1.93
SMARCC1-206ENST00000485737 NDUFB1O75438 58 aa3□□□□□ -1.93
SMARCC1-206ENST00000485737 MPLKIPQ8TAP9 179 aa3□□□□□ -1.93
SMARCC1-206ENST00000485737 PIEZO1Q92508 2521 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 ITPR3Q14573 2671 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 ACACBO00763 2458 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 PTPN13Q12923 2485 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 IGLV8-61A0A075B6I0 122 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 HCG22E2RYF7 251 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 DNAH10OSP0CZ25 163 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 C1orf64Q8NEQ6 169 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 KRTAP1-5Q9BYS1 174 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 PKIGQ9Y2B9 76 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 CSMD2Q7Z408 3487 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 TEX15Q9BXT5 2789 aa2.99□□□□□ -1.93
SMARCC1-206ENST00000485737 MYO18BQ8IUG5 2567 aa2.98□□□□□ -1.93
SMARCC1-206ENST00000485737 SPTBN4Q9H254 2564 aa2.98□□□□□ -1.93
SMARCC1-206ENST00000485737 H3BPC8 53 aa2.98□□□□□ -1.93
SMARCC1-206ENST00000485737 K7EQZ3 153 aa2.98□□□□□ -1.93
SMARCC1-206ENST00000485737 SPANXA2-OT1Q8N9U9 137 aa2.98□□□□□ -1.93
SMARCC1-206ENST00000485737 DEFB105AQ8NG35 78 aa2.98□□□□□ -1.93
SMARCC1-206ENST00000485737 V9GYY9 64 aa2.98□□□□□ -1.93
SMARCC1-206ENST00000485737 DNAH1Q9P2D7 4330 aa2.97□□□□□ -1.93
SMARCC1-206ENST00000485737 IGKV2D-24A0A075B6R9 120 aa2.97□□□□□ -1.93
SMARCC1-206ENST00000485737 TRAV22A0A0B4J277 110 aa2.97□□□□□ -1.93
SMARCC1-206ENST00000485737 PSCAO43653 123 aa2.97□□□□□ -1.93
SMARCC1-206ENST00000485737 KRTAP7-1Q8IUC3 87 aa2.97□□□□□ -1.93
SMARCC1-206ENST00000485737 ST20-AS1Q8NBB2 130 aa2.97□□□□□ -1.93
SMARCC1-206ENST00000485737 LINC00588Q9Y4M8 146 aa2.97□□□□□ -1.93
SMARCC1-206ENST00000485737 NIPBLQ6KC79 2804 aaeCLIP2.97□□□□□ -1.931e-23■■□□□ 11.7
SMARCC1-206ENST00000485737 LRRK2Q5S007 2527 aa2.97□□□□□ -1.93
SMARCC1-206ENST00000485737 ZNF462Q96JM2 2506 aa2.97□□□□□ -1.93
SMARCC1-206ENST00000485737 APCP25054 2843 aa2.96□□□□□ -1.94
SMARCC1-206ENST00000485737 IGKV2D-30A0A075B6S6 120 aa2.96□□□□□ -1.94
SMARCC1-206ENST00000485737 RPL37AP8A6NKH3 93 aa2.96□□□□□ -1.94
SMARCC1-206ENST00000485737 MP68P56378 58 aa2.96□□□□□ -1.94
SMARCC1-206ENST00000485737 MRPL55Q7Z7F7 128 aaKnown RBP2.96□□□□□ -1.94
SMARCC1-206ENST00000485737 ABCA12Q86UK0 2595 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms