RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 C5orf42Q9H799 3197 aa10.63□□□□□ -0.71
PCDH17-202ENST00000484979 ZNF292O60281 2723 aa10.62□□□□□ -0.71
PCDH17-202ENST00000484979 CHD9Q3L8U1 2897 aa10.62□□□□□ -0.71
PCDH17-202ENST00000484979 TRBV7-4A0A0J9YYF1 115 aa10.61□□□□□ -0.71
PCDH17-202ENST00000484979 SMCPP49901 116 aaPredicted RBP10.61□□□□□ -0.71
PCDH17-202ENST00000484979 CDIP1Q9H305 208 aa10.61□□□□□ -0.71
PCDH17-202ENST00000484979 C9orf163Q8N9P6 203 aa10.6□□□□□ -0.71
PCDH17-202ENST00000484979 KCNQ1DNQ9H478 68 aa10.6□□□□□ -0.71
PCDH17-202ENST00000484979 NOTCH1P46531 2555 aa10.6□□□□□ -0.71
PCDH17-202ENST00000484979 H3BPC8 53 aa10.59□□□□□ -0.71
PCDH17-202ENST00000484979 KRTAP1-1Q07627 177 aa10.59□□□□□ -0.71
PCDH17-202ENST00000484979 C7orf65Q6ZTY9 151 aa10.59□□□□□ -0.71
PCDH17-202ENST00000484979 LITAFQ99732 161 aa10.59□□□□□ -0.71
PCDH17-202ENST00000484979 UNC79Q9P2D8 2635 aa10.58□□□□□ -0.72
PCDH17-202ENST00000484979 IGLV1-50A0A075B6I6 118 aa10.58□□□□□ -0.72
PCDH17-202ENST00000484979 A0A087WTM6 91 aa10.58□□□□□ -0.72
PCDH17-202ENST00000484979 TRAV22A0A0B4J277 110 aa10.58□□□□□ -0.72
PCDH17-202ENST00000484979 FAM168BA1KXE4 195 aa10.57□□□□□ -0.72
PCDH17-202ENST00000484979 SERTAD4-AS1Q5TG53 156 aa10.57□□□□□ -0.72
PCDH17-202ENST00000484979 ACYP2P14621 99 aa10.57□□□□□ -0.72
PCDH17-202ENST00000484979 PRO0461Q9UI25 63 aa10.57□□□□□ -0.72
PCDH17-202ENST00000484979 SSBP3-AS1Q7Z2R9 100 aa10.56□□□□□ -0.72
PCDH17-202ENST00000484979 ATP11AUNQ6ZP68 121 aa10.56□□□□□ -0.72
PCDH17-202ENST00000484979 C8orf87E5RJ46 101 aa10.55□□□□□ -0.72
PCDH17-202ENST00000484979 LINC00528Q8N1L1 170 aa10.54□□□□□ -0.72
PCDH17-202ENST00000484979 PSPHP1O15172 72 aa10.54□□□□□ -0.72
PCDH17-202ENST00000484979 ZNF861PO60384 105 aa10.54□□□□□ -0.72
PCDH17-202ENST00000484979 C15orf56Q8N910 161 aa10.54□□□□□ -0.72
PCDH17-202ENST00000484979 PMAIP1Q13794 54 aa10.53□□□□□ -0.72
PCDH17-202ENST00000484979 LINC00336Q6ZUF6 198 aa10.53□□□□□ -0.72
PCDH17-202ENST00000484979 FLG2Q5D862 2391 aaPredicted RBP10.53□□□□□ -0.72
PCDH17-202ENST00000484979 RANBP2P49792 3224 aaKnown RBP10.52□□□□□ -0.72
PCDH17-202ENST00000484979 TRANK1O15050 2925 aa10.52□□□□□ -0.73
PCDH17-202ENST00000484979 SPAG11AQ6PDA7 123 aa10.52□□□□□ -0.73
PCDH17-202ENST00000484979 Q96NJ1 140 aa10.51□□□□□ -0.73
PCDH17-202ENST00000484979 CDH23Q9H251 3354 aa10.51□□□□□ -0.73
PCDH17-202ENST00000484979 TLX1NBP0CAT3 122 aa10.49□□□□□ -0.73
PCDH17-202ENST00000484979 A8MWP4 228 aa10.48□□□□□ -0.73
PCDH17-202ENST00000484979 A0A1B0GU69 56 aa10.48□□□□□ -0.73
PCDH17-202ENST00000484979 APLNQ9ULZ1 77 aa10.47□□□□□ -0.73
PCDH17-202ENST00000484979 BAHCC1Q9P281 2608 aa10.46□□□□□ -0.73
PCDH17-202ENST00000484979 LOC101927531A0A1B0GV80 90 aa10.46□□□□□ -0.73
PCDH17-202ENST00000484979 LINC00304Q8N9R0 145 aa10.46□□□□□ -0.73
PCDH17-202ENST00000484979 C1orf195Q5TG92 126 aa10.45□□□□□ -0.74
PCDH17-202ENST00000484979 MRPL34Q9BQ48 92 aaKnown RBP10.45□□□□□ -0.74
PCDH17-202ENST00000484979 PLA2G2DQ9UNK4 145 aa10.45□□□□□ -0.74
PCDH17-202ENST00000484979 UNC80Q8N2C7 3258 aa10.44□□□□□ -0.74
PCDH17-202ENST00000484979 ZNF575Q86XF7 245 aa10.43□□□□□ -0.74
PCDH17-202ENST00000484979 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
PCDH17-202ENST00000484979 SMR3BP02814 79 aaPredicted RBP10.43□□□□□ -0.74
PCDH17-202ENST00000484979 MGAQ8IWI9 3026 aa10.42□□□□□ -0.74
PCDH17-202ENST00000484979 EIF4EBP3O60516 100 aaPredicted RBP10.42□□□□□ -0.74
PCDH17-202ENST00000484979 CNBPP62633 177 aaKnown RBP10.41□□□□□ -0.74
PCDH17-202ENST00000484979 IGFL1Q6UW32 110 aa10.41□□□□□ -0.74
PCDH17-202ENST00000484979 MAP1AP78559 2803 aaPredicted RBP10.39□□□□□ -0.75
PCDH17-202ENST00000484979 UBR5O95071 2799 aaPredicted RBP10.39□□□□□ -0.75
PCDH17-202ENST00000484979 Q8N377 158 aa10.38□□□□□ -0.75
PCDH17-202ENST00000484979 IGLV7-43P04211 117 aa10.38□□□□□ -0.75
PCDH17-202ENST00000484979 K7EQZ3 153 aa10.38□□□□□ -0.75
PCDH17-202ENST00000484979 COX6B2Q6YFQ2 88 aa10.38□□□□□ -0.75
PCDH17-202ENST00000484979 GCN1Q92616 2671 aaKnown RBP10.37□□□□□ -0.75
PCDH17-202ENST00000484979 PSORS1C2Q9UIG4 136 aa10.37□□□□□ -0.75
PCDH17-202ENST00000484979 PRR15Q8IV56 129 aa10.35□□□□□ -0.75
PCDH17-202ENST00000484979 A0A1W2PNN7 141 aa10.34□□□□□ -0.75
PCDH17-202ENST00000484979 WIPF1O43516 503 aa10.33□□□□□ -0.76
PCDH17-202ENST00000484979 C8orf17Q9NRJ1 99 aa10.33□□□□□ -0.76
PCDH17-202ENST00000484979 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
PCDH17-202ENST00000484979 DSPP15924 2871 aaKnown RBP10.32□□□□□ -0.76
PCDH17-202ENST00000484979 XIRP2A4UGR9 3374 aa10.32□□□□□ -0.76
PCDH17-202ENST00000484979 SZT2Q5T011 3432 aa10.31□□□□□ -0.76
PCDH17-202ENST00000484979 A0A1B0GVX0 72 aa10.31□□□□□ -0.76
PCDH17-202ENST00000484979 DMBT1Q9UGM3 2413 aaPredicted RBP10.31□□□□□ -0.76
PCDH17-202ENST00000484979 NSD1Q96L73 2696 aaPredicted RBP10.3□□□□□ -0.76
PCDH17-202ENST00000484979 REV3LO60673 3130 aa10.29□□□□□ -0.76
PCDH17-202ENST00000484979 SPRR4Q96PI1 79 aa10.29□□□□□ -0.76
PCDH17-202ENST00000484979 ERC2-IT1O76042 136 aa10.29□□□□□ -0.76
PCDH17-202ENST00000484979 DSCR10P59022 87 aa10.29□□□□□ -0.76
PCDH17-202ENST00000484979 OBSCN-AS1Q96MR7 158 aa10.28□□□□□ -0.76
PCDH17-202ENST00000484979 ANAPC11Q9NYG5 84 aa10.27□□□□□ -0.77
PCDH17-202ENST00000484979 IGSF10Q6WRI0 2623 aa10.26□□□□□ -0.77
PCDH17-202ENST00000484979 RPS28P62857 69 aaKnown RBP10.26□□□□□ -0.77
PCDH17-202ENST00000484979 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
PCDH17-202ENST00000484979 TNP2Q05952 138 aa10.25□□□□□ -0.77
PCDH17-202ENST00000484979 CR1P17927 2039 aa10.24□□□□□ -0.77
PCDH17-202ENST00000484979 DNAH14Q0VDD8 3507 aa10.23□□□□□ -0.77
PCDH17-202ENST00000484979 IGLV5-37A0A075B6J1 123 aa10.22□□□□□ -0.77
PCDH17-202ENST00000484979 CFAP54Q96N23 3096 aa10.22□□□□□ -0.77
PCDH17-202ENST00000484979 C9orf92A6NGG3 77 aa10.21□□□□□ -0.77
PCDH17-202ENST00000484979 PRUNE2Q8WUY3 3088 aa10.2□□□□□ -0.78
PCDH17-202ENST00000484979 IGLV8-61A0A075B6I0 122 aa10.2□□□□□ -0.78
PCDH17-202ENST00000484979 A0A0G2JQZ4 141 aa10.2□□□□□ -0.78
PCDH17-202ENST00000484979 WDFY4Q6ZS81 3184 aa10.2□□□□□ -0.78
PCDH17-202ENST00000484979 LINC01600Q96MT4 127 aa10.19□□□□□ -0.78
PCDH17-202ENST00000484979 TRIOO75962 3097 aa10.18□□□□□ -0.78
PCDH17-202ENST00000484979 A0A1W2PNM2 257 aa10.17□□□□□ -0.78
PCDH17-202ENST00000484979 SPTBN5Q9NRC6 3674 aaKnown RBP10.16□□□□□ -0.78
PCDH17-202ENST00000484979 RBM12B-AS1Q9P1G2 102 aa10.15□□□□□ -0.78
PCDH17-202ENST00000484979 IGLV5-48A0A075B6I7 105 aa10.14□□□□□ -0.79
PCDH17-202ENST00000484979 COA5Q86WW8 74 aa10.14□□□□□ -0.79
PCDH17-202ENST00000484979 PRO0628Q9UI54 55 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms