RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 C20orf202A1L168 122 aa7.14□□□□□ -1.27
MSH5-216ENST00000484309 IGLV6-57P01721 117 aa7.14□□□□□ -1.27
MSH5-216ENST00000484309 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
MSH5-216ENST00000484309 RNF213Q63HN8 5207 aa7.14□□□□□ -1.27
MSH5-216ENST00000484309 LINC00308Q8TCZ7 52 aa7.14□□□□□ -1.27
MSH5-216ENST00000484309 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
MSH5-216ENST00000484309 ZNF706Q9Y5V0 76 aaPredicted RBP7.14□□□□□ -1.27
MSH5-216ENST00000484309 TRAV23DV6A0A075B6W5 121 aa7.13□□□□□ -1.27
MSH5-216ENST00000484309 ERC2-IT1O76042 136 aa7.13□□□□□ -1.27
MSH5-216ENST00000484309 TIMM17BO60830 172 aa7.12□□□□□ -1.27
MSH5-216ENST00000484309 GAGE2AQ6NT46 116 aa7.12□□□□□ -1.27
MSH5-216ENST00000484309 Q9BRP9 147 aa7.12□□□□□ -1.27
MSH5-216ENST00000484309 Q6ZRX8 168 aa7.11□□□□□ -1.27
MSH5-216ENST00000484309 OR13C6PQ8NH95 151 aa7.11□□□□□ -1.27
MSH5-216ENST00000484309 SPANXCQ9NY87 97 aa7.11□□□□□ -1.27
MSH5-216ENST00000484309 ZNF73O43830 326 aaPredicted RBP7.1□□□□□ -1.27
MSH5-216ENST00000484309 SCGB1D4Q6XE38 83 aa7.1□□□□□ -1.27
MSH5-216ENST00000484309 HIST3H2BBQ8N257 126 aa7.09□□□□□ -1.27
MSH5-216ENST00000484309 PCP2Q8IVA1 136 aa7.08□□□□□ -1.28
MSH5-216ENST00000484309 Q8NBF4 154 aa7.08□□□□□ -1.28
MSH5-216ENST00000484309 IGLV9-49A0A0B4J1Y8 123 aa7.07□□□□□ -1.28
MSH5-216ENST00000484309 S100A2P29034 98 aa7.07□□□□□ -1.28
MSH5-216ENST00000484309 LINC00483Q53H64 154 aa7.07□□□□□ -1.28
MSH5-216ENST00000484309 HIST1H2BLQ99880 126 aa7.07□□□□□ -1.28
MSH5-216ENST00000484309 CTAG1AP78358 180 aa7.06□□□□□ -1.28
MSH5-216ENST00000484309 MOBPQ13875 183 aa7.06□□□□□ -1.28
MSH5-216ENST00000484309 JOSD1Q15040 202 aaPredicted RBP7.06□□□□□ -1.28
MSH5-216ENST00000484309 SPANXDQ9BXN6 97 aa7.06□□□□□ -1.28
MSH5-216ENST00000484309 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
MSH5-216ENST00000484309 S100A6P06703 90 aa7.04□□□□□ -1.28
MSH5-216ENST00000484309 HINT1P49773 126 aaPredicted RBP7.04□□□□□ -1.28
MSH5-216ENST00000484309 C4orf48Q5BLP8 95 aa7.04□□□□□ -1.28
MSH5-216ENST00000484309 AKR1D1P51857 326 aa7.03□□□□□ -1.28
MSH5-216ENST00000484309 SPAG11AQ6PDA7 123 aa7.03□□□□□ -1.28
MSH5-216ENST00000484309 MUSTN1Q8IVN3 82 aa7.03□□□□□ -1.28
MSH5-216ENST00000484309 LINC00518Q8N0U6 118 aa7.03□□□□□ -1.28
MSH5-216ENST00000484309 CBY1Q9Y3M2 126 aa7.03□□□□□ -1.28
MSH5-216ENST00000484309 C6orf99Q4VX62 202 aa7.02□□□□□ -1.29
MSH5-216ENST00000484309 C9orf153Q5TBE3 101 aa7.02□□□□□ -1.29
MSH5-216ENST00000484309 IGLV7-46A0A075B6I9 117 aa7.01□□□□□ -1.29
MSH5-216ENST00000484309 IFITM1P13164 125 aa7.01□□□□□ -1.29
MSH5-216ENST00000484309 COX7BP24311 80 aa7.01□□□□□ -1.29
MSH5-216ENST00000484309 SNRPEP62304 92 aaKnown RBP7.01□□□□□ -1.29
MSH5-216ENST00000484309 A6NDN8 102 aa7□□□□□ -1.29
MSH5-216ENST00000484309 COPS9Q8WXC6 57 aa7□□□□□ -1.29
MSH5-216ENST00000484309 HSBP1L1C9JCN9 74 aa6.99□□□□□ -1.29
MSH5-216ENST00000484309 ELOF1P60002 83 aaKnown RBP6.99□□□□□ -1.29
MSH5-216ENST00000484309 Q6ZVH6 145 aa6.98□□□□□ -1.29
MSH5-216ENST00000484309 SSBP3-AS1Q7Z2R9 100 aa6.98□□□□□ -1.29
MSH5-216ENST00000484309 DHRS4-AS1Q9P1J3 65 aa6.98□□□□□ -1.29
MSH5-216ENST00000484309 SCGB1D1O95968 90 aa6.97□□□□□ -1.29
MSH5-216ENST00000484309 SPINK1P00995 79 aa6.97□□□□□ -1.29
MSH5-216ENST00000484309 CDIP1Q9H305 208 aa6.97□□□□□ -1.29
MSH5-216ENST00000484309 LOC105371267A0A1B0GV96 52 aa6.96□□□□□ -1.3
MSH5-216ENST00000484309 TPRXLQ17RH7 258 aa6.96□□□□□ -1.3
MSH5-216ENST00000484309 DEFB105AQ8NG35 78 aa6.96□□□□□ -1.3
MSH5-216ENST00000484309 C5orf52A6NGY3 159 aa6.94□□□□□ -1.3
MSH5-216ENST00000484309 SPRR1BP22528 89 aa6.94□□□□□ -1.3
MSH5-216ENST00000484309 TRAV13-2A0A0B4J235 113 aa6.93□□□□□ -1.3
MSH5-216ENST00000484309 A0A1B0GWB2 263 aa6.93□□□□□ -1.3
MSH5-216ENST00000484309 TAL2Q16559 108 aa6.93□□□□□ -1.3
MSH5-216ENST00000484309 Q1RN00 199 aa6.93□□□□□ -1.3
MSH5-216ENST00000484309 HRCT1Q6UXD1 115 aa6.93□□□□□ -1.3
MSH5-216ENST00000484309 FP248Q71RG6 208 aaPredicted RBP6.93□□□□□ -1.3
MSH5-216ENST00000484309 Q8N377 158 aa6.93□□□□□ -1.3
MSH5-216ENST00000484309 SMIM11BQ8TCY0 68 aa6.93□□□□□ -1.3
MSH5-216ENST00000484309 TMA7Q9Y2S6 64 aaKnown RBP6.93□□□□□ -1.3
MSH5-216ENST00000484309 TRBV7-6A0A0J9YX20 115 aa6.92□□□□□ -1.3
MSH5-216ENST00000484309 A4D1N5 150 aa6.92□□□□□ -1.3
MSH5-216ENST00000484309 LAMTOR3Q9UHA4 124 aa6.92□□□□□ -1.3
MSH5-216ENST00000484309 SLC25A34Q6PIV7 304 aa6.91□□□□□ -1.3
MSH5-216ENST00000484309 C12orf57Q99622 126 aa6.91□□□□□ -1.3
MSH5-216ENST00000484309 MUC17Q685J3 4493 aa6.91□□□□□ -1.3
MSH5-216ENST00000484309 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
MSH5-216ENST00000484309 TEX49A0A1B0GTD5 131 aa6.89□□□□□ -1.31
MSH5-216ENST00000484309 SLC25A20O43772 301 aa6.89□□□□□ -1.31
MSH5-216ENST00000484309 COX8AP10176 69 aa6.89□□□□□ -1.31
MSH5-216ENST00000484309 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
MSH5-216ENST00000484309 KRTAP13-3Q3SY46 172 aa6.89□□□□□ -1.31
MSH5-216ENST00000484309 HIST1H4GQ99525 98 aa6.89□□□□□ -1.31
MSH5-216ENST00000484309 MUC2Q02817 5179 aa6.89□□□□□ -1.31
MSH5-216ENST00000484309 PAM16Q9Y3D7 125 aa6.88□□□□□ -1.31
MSH5-216ENST00000484309 A0A0G2JQZ4 141 aa6.87□□□□□ -1.31
MSH5-216ENST00000484309 SMIM29Q86T20 159 aa6.87□□□□□ -1.31
MSH5-216ENST00000484309 C14orf144Q96I85 54 aa6.87□□□□□ -1.31
MSH5-216ENST00000484309 IGLV5-48A0A075B6I7 105 aa6.86□□□□□ -1.31
MSH5-216ENST00000484309 SPATA45Q537H7 98 aa6.86□□□□□ -1.31
MSH5-216ENST00000484309 NHP2Q9NX24 153 aaKnown RBP6.86□□□□□ -1.31
MSH5-216ENST00000484309 H7C2G1 150 aa6.85□□□□□ -1.31
MSH5-216ENST00000484309 PRO1933Q9H354 126 aa6.85□□□□□ -1.31
MSH5-216ENST00000484309 DLEU1O43261 78 aa6.84□□□□□ -1.31
MSH5-216ENST00000484309 VAMP3Q15836 100 aa6.84□□□□□ -1.31
MSH5-216ENST00000484309 LIMD2Q9BT23 127 aa6.84□□□□□ -1.31
MSH5-216ENST00000484309 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
MSH5-216ENST00000484309 LINC00575Q6W349 94 aa6.83□□□□□ -1.32
MSH5-216ENST00000484309 VAMP8Q9BV40 100 aa6.83□□□□□ -1.32
MSH5-216ENST00000484309 Q6ZQY7 126 aa6.82□□□□□ -1.32
MSH5-216ENST00000484309 hADV29S1A0JD25 119 aa6.81□□□□□ -1.32
MSH5-216ENST00000484309 C2orf91Q6ZV80 131 aa6.81□□□□□ -1.32
MSH5-216ENST00000484309 A0A0U1RQV1 116 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms