RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 DPH3Q96FX2 82 aa6.42□□□□□ -1.38
LIMK1-205ENST00000483414 XAGE1AQ9HD64 81 aa6.42□□□□□ -1.38
LIMK1-205ENST00000483414 CD164L2Q6UWJ8 174 aa6.41□□□□□ -1.38
LIMK1-205ENST00000483414 Q8IZM0 81 aa6.41□□□□□ -1.38
LIMK1-205ENST00000483414 USP17L23D6RBM5 183 aa6.41□□□□□ -1.38
LIMK1-205ENST00000483414 ENHOQ6UWT2 76 aa6.41□□□□□ -1.38
LIMK1-205ENST00000483414 Q6ZRN7 208 aaPredicted RBP6.4□□□□□ -1.38
LIMK1-205ENST00000483414 LINC01600Q96MT4 127 aa6.4□□□□□ -1.38
LIMK1-205ENST00000483414 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
LIMK1-205ENST00000483414 C20orf197Q8N268 126 aa6.4□□□□□ -1.38
LIMK1-205ENST00000483414 HIGD2BQ4VC39 106 aa6.4□□□□□ -1.39
LIMK1-205ENST00000483414 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
LIMK1-205ENST00000483414 LCE6AA0A183 80 aa6.38□□□□□ -1.39
LIMK1-205ENST00000483414 ATOX1O00244 68 aa6.38□□□□□ -1.39
LIMK1-205ENST00000483414 IMUPQ9GZP8 106 aa6.38□□□□□ -1.39
LIMK1-205ENST00000483414 SNURFQ9Y675 71 aa6.38□□□□□ -1.39
LIMK1-205ENST00000483414 GHRHP01286 108 aa6.37□□□□□ -1.39
LIMK1-205ENST00000483414 CRYGAP11844 174 aa6.37□□□□□ -1.39
LIMK1-205ENST00000483414 HAMPP81172 84 aa6.37□□□□□ -1.39
LIMK1-205ENST00000483414 Q8N814 137 aa6.37□□□□□ -1.39
LIMK1-205ENST00000483414 PKIGQ9Y2B9 76 aa6.37□□□□□ -1.39
LIMK1-205ENST00000483414 NBDYA0A0U1RRE5 68 aa6.37□□□□□ -1.39
LIMK1-205ENST00000483414 ZNF561-AS1K7EIQ3 104 aa6.37□□□□□ -1.39
LIMK1-205ENST00000483414 TMEM256-PLSCR3K7ERE1 68 aa6.36□□□□□ -1.39
LIMK1-205ENST00000483414 Q5XG85 94 aa6.36□□□□□ -1.39
LIMK1-205ENST00000483414 SCXQ7RTU7 201 aa6.36□□□□□ -1.39
LIMK1-205ENST00000483414 SERP2Q8N6R1 65 aa6.35□□□□□ -1.39
LIMK1-205ENST00000483414 KIAA0087Q14695 138 aa6.35□□□□□ -1.39
LIMK1-205ENST00000483414 M0R2N4 97 aa6.35□□□□□ -1.39
LIMK1-205ENST00000483414 CAMK2N2Q96S95 79 aa6.35□□□□□ -1.39
LIMK1-205ENST00000483414 UBL5Q9BZL1 73 aa6.34□□□□□ -1.39
LIMK1-205ENST00000483414 JMJD7-PLA2G4BH0Y9G9 81 aa6.34□□□□□ -1.39
LIMK1-205ENST00000483414 Q6ZQY7 126 aa6.34□□□□□ -1.39
LIMK1-205ENST00000483414 A0A0U1RQV1 116 aa6.34□□□□□ -1.4
LIMK1-205ENST00000483414 RBM3P98179 157 aaKnown RBP6.34□□□□□ -1.4
LIMK1-205ENST00000483414 CCKP06307 115 aa6.33□□□□□ -1.4
LIMK1-205ENST00000483414 Q8NDZ9 215 aa6.33□□□□□ -1.4
LIMK1-205ENST00000483414 EPPK1P58107 5090 aaKnown RBP6.33□□□□□ -1.4
LIMK1-205ENST00000483414 LRP1BQ9NZR2 4599 aa6.33□□□□□ -1.4
LIMK1-205ENST00000483414 COX17Q14061 63 aa6.32□□□□□ -1.4
LIMK1-205ENST00000483414 C1orf43Q9BWL3 253 aa6.32□□□□□ -1.4
LIMK1-205ENST00000483414 IGKV2D-24A0A075B6R9 120 aa6.32□□□□□ -1.4
LIMK1-205ENST00000483414 LINC00336Q6ZUF6 198 aa6.32□□□□□ -1.4
LIMK1-205ENST00000483414 TRBV10-3A0A0K0K1G6 114 aa6.32□□□□□ -1.4
LIMK1-205ENST00000483414 LY6G6CO95867 125 aa6.32□□□□□ -1.4
LIMK1-205ENST00000483414 UBE2DNLQ8IWF7 75 aa6.32□□□□□ -1.4
LIMK1-205ENST00000483414 RMI2Q96E14 147 aa6.31□□□□□ -1.4
LIMK1-205ENST00000483414 APOBP04114 4563 aaKnown RBP6.31□□□□□ -1.4
LIMK1-205ENST00000483414 LRCOL1A6NCL2 159 aa6.31□□□□□ -1.4
LIMK1-205ENST00000483414 LINC00474Q9P2X8 69 aa6.31□□□□□ -1.4
LIMK1-205ENST00000483414 RTL8CO15255 209 aa6.31□□□□□ -1.4
LIMK1-205ENST00000483414 TMEM258P61165 79 aa6.31□□□□□ -1.4
LIMK1-205ENST00000483414 DEFB105AQ8NG35 78 aa6.31□□□□□ -1.4
LIMK1-205ENST00000483414 NDUFC2O95298 119 aa6.3□□□□□ -1.4
LIMK1-205ENST00000483414 LINC00575Q6W349 94 aa6.3□□□□□ -1.4
LIMK1-205ENST00000483414 Q6JHZ5 121 aa6.29□□□□□ -1.4
LIMK1-205ENST00000483414 C15orf56Q8N910 161 aa6.29□□□□□ -1.4
LIMK1-205ENST00000483414 DIRC1Q969H9 104 aa6.29□□□□□ -1.4
LIMK1-205ENST00000483414 C6orf48Q9UBA6 75 aa6.28□□□□□ -1.4
LIMK1-205ENST00000483414 COX7BP24311 80 aa6.27□□□□□ -1.41
LIMK1-205ENST00000483414 MPLKIPQ8TAP9 179 aa6.27□□□□□ -1.41
LIMK1-205ENST00000483414 FAM236DA0A1B0GTK5 79 aa6.26□□□□□ -1.41
LIMK1-205ENST00000483414 ZNF73O43830 326 aaPredicted RBP6.26□□□□□ -1.41
LIMK1-205ENST00000483414 FAM236CP0DP71 79 aa6.26□□□□□ -1.41
LIMK1-205ENST00000483414 Q8N9L7 120 aa6.26□□□□□ -1.41
LIMK1-205ENST00000483414 A0A1B0GVY2 172 aa6.26□□□□□ -1.41
LIMK1-205ENST00000483414 Q6ZRU5 148 aa6.26□□□□□ -1.41
LIMK1-205ENST00000483414 OBSCN-AS1Q96MR7 158 aa6.25□□□□□ -1.41
LIMK1-205ENST00000483414 RPS28P62857 69 aaKnown RBP6.25□□□□□ -1.41
LIMK1-205ENST00000483414 F8WEM9 126 aa6.24□□□□□ -1.41
LIMK1-205ENST00000483414 GVQW2A0A096LPI5 108 aaPredicted RBP6.24□□□□□ -1.41
LIMK1-205ENST00000483414 NKAPP1Q8N9T2 125 aa6.24□□□□□ -1.41
LIMK1-205ENST00000483414 BRK1Q8WUW1 75 aa6.24□□□□□ -1.41
LIMK1-205ENST00000483414 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.24□□□□□ -1.41
LIMK1-205ENST00000483414 C1orf134Q5TEV5 83 aa6.23□□□□□ -1.41
LIMK1-205ENST00000483414 HSPG2P98160 4391 aa6.22□□□□□ -1.41
LIMK1-205ENST00000483414 RPL37AP8A6NKH3 93 aa6.22□□□□□ -1.41
LIMK1-205ENST00000483414 H7BZZ5 65 aa6.22□□□□□ -1.41
LIMK1-205ENST00000483414 Q6ZQT0 140 aa6.22□□□□□ -1.41
LIMK1-205ENST00000483414 A0A087WTM6 91 aa6.21□□□□□ -1.41
LIMK1-205ENST00000483414 IGLV6-57P01721 117 aa6.21□□□□□ -1.41
LIMK1-205ENST00000483414 TNP2Q05952 138 aa6.21□□□□□ -1.41
LIMK1-205ENST00000483414 Q6ZVQ6 151 aa6.21□□□□□ -1.42
LIMK1-205ENST00000483414 FP248Q71RG6 208 aaPredicted RBP6.21□□□□□ -1.42
LIMK1-205ENST00000483414 FAM229BQ4G0N7 80 aa6.21□□□□□ -1.42
LIMK1-205ENST00000483414 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
LIMK1-205ENST00000483414 LINC01547P58512 204 aaPredicted RBP6.2□□□□□ -1.42
LIMK1-205ENST00000483414 SYCNQ0VAF6 134 aa6.2□□□□□ -1.42
LIMK1-205ENST00000483414 LINC00167Q96N53 147 aa6.2□□□□□ -1.42
LIMK1-205ENST00000483414 M0R378 163 aa6.2□□□□□ -1.42
LIMK1-205ENST00000483414 CNBPP62633 177 aaKnown RBP6.2□□□□□ -1.42
LIMK1-205ENST00000483414 VPS13BQ7Z7G8 4022 aa6.19□□□□□ -1.42
LIMK1-205ENST00000483414 NDUFC2-KCTD14E9PQ53 114 aa6.18□□□□□ -1.42
LIMK1-205ENST00000483414 Q6ZRP5 223 aa6.18□□□□□ -1.42
LIMK1-205ENST00000483414 ATP5EP2Q5VTU8 51 aa6.18□□□□□ -1.42
LIMK1-205ENST00000483414 VPREB1P12018 145 aa6.17□□□□□ -1.42
LIMK1-205ENST00000483414 KRTAP10-2P60368 255 aa6.17□□□□□ -1.42
LIMK1-205ENST00000483414 NREPQ16612 68 aa6.17□□□□□ -1.42
LIMK1-205ENST00000483414 PDE6GP18545 87 aa6.15□□□□□ -1.42
LIMK1-205ENST00000483414 RYR1P21817 5038 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms