RNA–Protein interactions for RNA: ENST00000483060.1

SGIP1-210, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-210ENST00000483060 IGLV1-51P01701 117 aa3.6□□□□□ -1.83
SGIP1-210ENST00000483060 GIG44P09565 113 aaPredicted RBP3.6□□□□□ -1.83
SGIP1-210ENST00000483060 Q8NAQ8 132 aa3.6□□□□□ -1.83
SGIP1-210ENST00000483060 CEP250Q9BV73 2442 aa3.6□□□□□ -1.83
SGIP1-210ENST00000483060 MED13LQ71F56 2210 aa3.59□□□□□ -1.83
SGIP1-210ENST00000483060 A8MWP4 228 aa3.59□□□□□ -1.83
SGIP1-210ENST00000483060 DEFB130BP0DP73 79 aa3.59□□□□□ -1.83
SGIP1-210ENST00000483060 DEFB130AP0DP74 79 aa3.59□□□□□ -1.83
SGIP1-210ENST00000483060 C10orf99Q6UWK7 81 aa3.59□□□□□ -1.83
SGIP1-210ENST00000483060 MKI67P46013 3256 aaKnown RBP3.58□□□□□ -1.84
SGIP1-210ENST00000483060 A0A1W2PPR1 153 aa3.58□□□□□ -1.84
SGIP1-210ENST00000483060 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
SGIP1-210ENST00000483060 XAGE1AQ9HD64 81 aa3.58□□□□□ -1.84
SGIP1-210ENST00000483060 SPTBN2O15020 2390 aa3.58□□□□□ -1.84
SGIP1-210ENST00000483060 IGLV10-54A0A075B6I4 117 aa3.57□□□□□ -1.84
SGIP1-210ENST00000483060 KRTAP4-16G5E9R7 235 aaPredicted RBP3.57□□□□□ -1.84
SGIP1-210ENST00000483060 LINC00313P59037 77 aa3.57□□□□□ -1.84
SGIP1-210ENST00000483060 CLPSL2Q6UWE3 100 aa3.57□□□□□ -1.84
SGIP1-210ENST00000483060 DEFB105AQ8NG35 78 aa3.57□□□□□ -1.84
SGIP1-210ENST00000483060 IGLV1-50A0A075B6I6 118 aa3.56□□□□□ -1.84
SGIP1-210ENST00000483060 RPL37AP61513 92 aaKnown RBP3.56□□□□□ -1.84
SGIP1-210ENST00000483060 PRR4Q16378 134 aa3.56□□□□□ -1.84
SGIP1-210ENST00000483060 DEFB136Q30KP8 78 aa3.56□□□□□ -1.84
SGIP1-210ENST00000483060 Q6ZR54 194 aa3.56□□□□□ -1.84
SGIP1-210ENST00000483060 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
SGIP1-210ENST00000483060 XIRP2A4UGR9 3374 aa3.56□□□□□ -1.84
SGIP1-210ENST00000483060 TNRC18O15417 2968 aaPredicted RBP3.56□□□□□ -1.84
SGIP1-210ENST00000483060 MAP1BP46821 2468 aaKnown RBP3.55□□□□□ -1.84
SGIP1-210ENST00000483060 SPTBN1Q01082 2364 aaKnown RBP3.55□□□□□ -1.84
SGIP1-210ENST00000483060 SPART-AS1P0CW21 52 aa3.55□□□□□ -1.84
SGIP1-210ENST00000483060 ACYP2P14621 99 aa3.55□□□□□ -1.84
SGIP1-210ENST00000483060 WFDC10BQ8IUB3 73 aa3.55□□□□□ -1.84
SGIP1-210ENST00000483060 WFDC13Q8IUB5 93 aa3.55□□□□□ -1.84
SGIP1-210ENST00000483060 C7orf33Q8WU49 177 aa3.55□□□□□ -1.84
SGIP1-210ENST00000483060 ZZEF1O43149 2961 aa3.55□□□□□ -1.84
SGIP1-210ENST00000483060 ANKHD1Q8IWZ3 2542 aaKnown RBP3.54□□□□□ -1.84
SGIP1-210ENST00000483060 CNOT1A5YKK6 2376 aaKnown RBP3.54□□□□□ -1.84
SGIP1-210ENST00000483060 SPATA8Q6RVD6 105 aa3.54□□□□□ -1.84
SGIP1-210ENST00000483060 COL6A3P12111 3177 aa3.54□□□□□ -1.84
SGIP1-210ENST00000483060 H0Y9J4 135 aa3.53□□□□□ -1.84
SGIP1-210ENST00000483060 SPRR1BP22528 89 aa3.53□□□□□ -1.84
SGIP1-210ENST00000483060 SPAG11AQ6PDA7 123 aa3.53□□□□□ -1.84
SGIP1-210ENST00000483060 UQCR11O14957 56 aa3.52□□□□□ -1.85
SGIP1-210ENST00000483060 RTL8CO15255 209 aa3.52□□□□□ -1.85
SGIP1-210ENST00000483060 PRB1P04280 392 aa3.52□□□□□ -1.85
SGIP1-210ENST00000483060 REG3GQ6UW15 175 aa3.52□□□□□ -1.85
SGIP1-210ENST00000483060 IGFL1Q6UW32 110 aa3.52□□□□□ -1.85
SGIP1-210ENST00000483060 LINC00472Q9H8W2 130 aa3.52□□□□□ -1.85
SGIP1-210ENST00000483060 LAMA2P24043 3122 aaKnown RBP3.52□□□□□ -1.85
SGIP1-210ENST00000483060 EP300Q09472 2414 aaPredicted RBP3.51□□□□□ -1.85
SGIP1-210ENST00000483060 A0A087WSZ3 146 aa3.51□□□□□ -1.85
SGIP1-210ENST00000483060 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
SGIP1-210ENST00000483060 A8MU10 97 aa3.51□□□□□ -1.85
SGIP1-210ENST00000483060 KRTAP16-1A8MUX0 517 aa3.51□□□□□ -1.85
SGIP1-210ENST00000483060 COL6A6A6NMZ7 2263 aa3.51□□□□□ -1.85
SGIP1-210ENST00000483060 NBEAQ8NFP9 2946 aa3.5□□□□□ -1.85
SGIP1-210ENST00000483060 A0A096LPF7 62 aa3.5□□□□□ -1.85
SGIP1-210ENST00000483060 IGKV2-24A0A0C4DH68 120 aa3.5□□□□□ -1.85
SGIP1-210ENST00000483060 LINC01556Q5JQF7 62 aa3.5□□□□□ -1.85
SGIP1-210ENST00000483060 KRTAP26-1Q6PEX3 210 aa3.5□□□□□ -1.85
SGIP1-210ENST00000483060 C15orf56Q8N910 161 aa3.5□□□□□ -1.85
SGIP1-210ENST00000483060 APC2O95996 2303 aa3.5□□□□□ -1.85
SGIP1-210ENST00000483060 PCNX1Q96RV3 2341 aa3.5□□□□□ -1.85
SGIP1-210ENST00000483060 RP1L1Q8IWN7 2480 aaPredicted RBP3.5□□□□□ -1.85
SGIP1-210ENST00000483060 CACNA1HO95180 2353 aa3.49□□□□□ -1.85
SGIP1-210ENST00000483060 MMP24-AS1A0A0U1RRL7 71 aa3.49□□□□□ -1.85
SGIP1-210ENST00000483060 A0A1B0GU69 56 aa3.49□□□□□ -1.85
SGIP1-210ENST00000483060 HRES1P13985 223 aa3.49□□□□□ -1.85
SGIP1-210ENST00000483060 SPINK7P58062 85 aa3.49□□□□□ -1.85
SGIP1-210ENST00000483060 DEFB123Q8N688 67 aa3.49□□□□□ -1.85
SGIP1-210ENST00000483060 GPR179Q6PRD1 2367 aa3.49□□□□□ -1.85
SGIP1-210ENST00000483060 VCANP13611 3396 aa3.48□□□□□ -1.85
SGIP1-210ENST00000483060 LAMA1P25391 3075 aa3.48□□□□□ -1.85
SGIP1-210ENST00000483060 LAMA3Q16787 3333 aa3.48□□□□□ -1.85
SGIP1-210ENST00000483060 FRYQ5TBA9 3013 aa3.48□□□□□ -1.85
SGIP1-210ENST00000483060 USP34Q70CQ2 3546 aa3.48□□□□□ -1.85
SGIP1-210ENST00000483060 CR1P17927 2039 aa3.48□□□□□ -1.85
SGIP1-210ENST00000483060 SORL1Q92673 2214 aa3.47□□□□□ -1.85
SGIP1-210ENST00000483060 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
SGIP1-210ENST00000483060 WNK1Q9H4A3 2382 aa3.47□□□□□ -1.85
SGIP1-210ENST00000483060 VPS13AQ96RL7 3174 aa3.47□□□□□ -1.85
SGIP1-210ENST00000483060 PRB2P02812 416 aaPredicted RBP3.46□□□□□ -1.86
SGIP1-210ENST00000483060 MRPL34Q9BQ48 92 aaKnown RBP3.46□□□□□ -1.86
SGIP1-210ENST00000483060 REV3LO60673 3130 aa3.45□□□□□ -1.86
SGIP1-210ENST00000483060 DEFB116Q30KQ4 102 aa3.45□□□□□ -1.86
SGIP1-210ENST00000483060 C8orf17Q9NRJ1 99 aa3.45□□□□□ -1.86
SGIP1-210ENST00000483060 TRIOO75962 3097 aa3.45□□□□□ -1.86
SGIP1-210ENST00000483060 CDH23Q9H251 3354 aa3.44□□□□□ -1.86
SGIP1-210ENST00000483060 PCOTHQ58A44 107 aa3.44□□□□□ -1.86
SGIP1-210ENST00000483060 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
SGIP1-210ENST00000483060 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
SGIP1-210ENST00000483060 WDFY3Q8IZQ1 3526 aa3.44□□□□□ -1.86
SGIP1-210ENST00000483060 PIEZO2Q9H5I5 2752 aa3.43□□□□□ -1.86
SGIP1-210ENST00000483060 A0A1B0GVX0 72 aa3.43□□□□□ -1.86
SGIP1-210ENST00000483060 DNAH10OSP0CZ25 163 aa3.43□□□□□ -1.86
SGIP1-210ENST00000483060 DMAC1Q96GE9 116 aa3.43□□□□□ -1.86
SGIP1-210ENST00000483060 CEP290O15078 2479 aa3.43□□□□□ -1.86
SGIP1-210ENST00000483060 ZDBF2Q9HCK1 2354 aa3.43□□□□□ -1.86
SGIP1-210ENST00000483060 IGHV6-1A0A0B4J1U7 121 aa3.42□□□□□ -1.86
SGIP1-210ENST00000483060 DEFB113Q30KQ7 82 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms