RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 A6NJY4 79 aa8.27□□□□□ -1.09
VARS-225ENST00000482996 M0R378 163 aa8.27□□□□□ -1.09
VARS-225ENST00000482996 FAM19A1Q7Z5A9 133 aa8.27□□□□□ -1.09
VARS-225ENST00000482996 CRYGAP11844 174 aa8.26□□□□□ -1.09
VARS-225ENST00000482996 PRLHP81277 87 aa8.25□□□□□ -1.09
VARS-225ENST00000482996 BATFQ16520 125 aa8.25□□□□□ -1.09
VARS-225ENST00000482996 SPANXDQ9BXN6 97 aa8.25□□□□□ -1.09
VARS-225ENST00000482996 SPANXCQ9NY87 97 aa8.25□□□□□ -1.09
VARS-225ENST00000482996 IFITM1P13164 125 aa8.24□□□□□ -1.09
VARS-225ENST00000482996 HINT1P49773 126 aaPredicted RBP8.24□□□□□ -1.09
VARS-225ENST00000482996 NPC2P61916 151 aa8.23□□□□□ -1.09
VARS-225ENST00000482996 CEND1Q8N111 149 aa8.23□□□□□ -1.09
VARS-225ENST00000482996 A0A087X002 238 aa8.22□□□□□ -1.09
VARS-225ENST00000482996 A6NDN8 102 aa8.22□□□□□ -1.09
VARS-225ENST00000482996 PRYO14603 147 aa8.22□□□□□ -1.09
VARS-225ENST00000482996 NCR3O14931 201 aa8.22□□□□□ -1.09
VARS-225ENST00000482996 FAM229BQ4G0N7 80 aa8.22□□□□□ -1.09
VARS-225ENST00000482996 DAND5Q8N907 189 aa8.22□□□□□ -1.09
VARS-225ENST00000482996 TYMSOSQ8TAI1 123 aa8.22□□□□□ -1.09
VARS-225ENST00000482996 ANAPC11Q9NYG5 84 aa8.21□□□□□ -1.1
VARS-225ENST00000482996 LITAFQ99732 161 aa8.2□□□□□ -1.1
VARS-225ENST00000482996 HIGD2AQ9BW72 106 aa8.2□□□□□ -1.1
VARS-225ENST00000482996 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
VARS-225ENST00000482996 BVES-AS1Q5T3Y7 98 aa8.19□□□□□ -1.1
VARS-225ENST00000482996 ADAMTSL4-AS1Q5T5F5 129 aa8.19□□□□□ -1.1
VARS-225ENST00000482996 MUSTN1Q8IVN3 82 aa8.19□□□□□ -1.1
VARS-225ENST00000482996 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
VARS-225ENST00000482996 LINC00308Q8TCZ7 52 aa8.19□□□□□ -1.1
VARS-225ENST00000482996 RNF213Q63HN8 5207 aa8.18□□□□□ -1.1
VARS-225ENST00000482996 KCNQ1DNQ9H478 68 aa8.18□□□□□ -1.1
VARS-225ENST00000482996 TRBV10-3A0A0K0K1G6 114 aa8.17□□□□□ -1.1
VARS-225ENST00000482996 TRBV10-2A0A0K0K1G8 114 aa8.17□□□□□ -1.1
VARS-225ENST00000482996 ETDCA0A1B0GVM5 59 aa8.17□□□□□ -1.1
VARS-225ENST00000482996 FXYD2P54710 66 aa8.17□□□□□ -1.1
VARS-225ENST00000482996 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
VARS-225ENST00000482996 RAB37Q96AX2 223 aa8.17□□□□□ -1.1
VARS-225ENST00000482996 NHP2Q9NX24 153 aaKnown RBP8.17□□□□□ -1.1
VARS-225ENST00000482996 A4D1N5 150 aa8.16□□□□□ -1.1
VARS-225ENST00000482996 TSPAN13O95857 204 aa8.16□□□□□ -1.1
VARS-225ENST00000482996 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
VARS-225ENST00000482996 PPDPFQ9H3Y8 114 aa8.16□□□□□ -1.1
VARS-225ENST00000482996 ZNF706Q9Y5V0 76 aaPredicted RBP8.16□□□□□ -1.1
VARS-225ENST00000482996 SPRR1AP35321 89 aa8.15□□□□□ -1.1
VARS-225ENST00000482996 PRR4Q16378 134 aa8.15□□□□□ -1.1
VARS-225ENST00000482996 COL5A1-AS1Q5SY13 56 aa8.15□□□□□ -1.1
VARS-225ENST00000482996 NDUFC2O95298 119 aa8.14□□□□□ -1.11
VARS-225ENST00000482996 SNHG12Q9BXW3 62 aa8.14□□□□□ -1.11
VARS-225ENST00000482996 S100A7L2Q5SY68 101 aa8.13□□□□□ -1.11
VARS-225ENST00000482996 LINC00304Q8N9R0 145 aa8.13□□□□□ -1.11
VARS-225ENST00000482996 SPRR4Q96PI1 79 aa8.13□□□□□ -1.11
VARS-225ENST00000482996 A0A0B4J2C4 111 aa8.12□□□□□ -1.11
VARS-225ENST00000482996 KRTAP4-16G5E9R7 235 aaPredicted RBP8.12□□□□□ -1.11
VARS-225ENST00000482996 Q1RN00 199 aa8.12□□□□□ -1.11
VARS-225ENST00000482996 SOSTDC1Q6X4U4 206 aa8.12□□□□□ -1.11
VARS-225ENST00000482996 TRAV13-2A0A0B4J235 113 aa8.11□□□□□ -1.11
VARS-225ENST00000482996 SMCR5Q8TEV8 140 aa8.11□□□□□ -1.11
VARS-225ENST00000482996 LPAP08519 4548 aa8.11□□□□□ -1.11
VARS-225ENST00000482996 OR13C6PQ8NH95 151 aa8.1□□□□□ -1.11
VARS-225ENST00000482996 PRO1854Q9UHT4 67 aa8.1□□□□□ -1.11
VARS-225ENST00000482996 B5MCH6 92 aa8.09□□□□□ -1.11
VARS-225ENST00000482996 K7ERJ3 54 aa8.09□□□□□ -1.11
VARS-225ENST00000482996 IGLV6-57P01721 117 aa8.09□□□□□ -1.11
VARS-225ENST00000482996 C3orf22Q8N5N4 141 aa8.09□□□□□ -1.11
VARS-225ENST00000482996 CBY1Q9Y3M2 126 aa8.09□□□□□ -1.11
VARS-225ENST00000482996 TRAV23DV6A0A075B6W5 121 aa8.08□□□□□ -1.12
VARS-225ENST00000482996 CFC1BP0CG36 223 aa8.08□□□□□ -1.12
VARS-225ENST00000482996 CFC1P0CG37 223 aa8.08□□□□□ -1.12
VARS-225ENST00000482996 A0A1B0GWB2 263 aa8.07□□□□□ -1.12
VARS-225ENST00000482996 H7C2G1 150 aa8.07□□□□□ -1.12
VARS-225ENST00000482996 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
VARS-225ENST00000482996 PSMB2P49721 201 aa8.06□□□□□ -1.12
VARS-225ENST00000482996 LYRM7Q5U5X0 104 aa8.06□□□□□ -1.12
VARS-225ENST00000482996 Q6ZRX8 168 aa8.06□□□□□ -1.12
VARS-225ENST00000482996 ZNF73O43830 326 aaPredicted RBP8.05□□□□□ -1.12
VARS-225ENST00000482996 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
VARS-225ENST00000482996 GAGE2AQ6NT46 116 aa8.05□□□□□ -1.12
VARS-225ENST00000482996 SPAG11AQ6PDA7 123 aa8.05□□□□□ -1.12
VARS-225ENST00000482996 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
VARS-225ENST00000482996 ERC2-IT1O76042 136 aa8.03□□□□□ -1.12
VARS-225ENST00000482996 COX6CP09669 75 aa8.03□□□□□ -1.12
VARS-225ENST00000482996 Q9BRP9 147 aa8.03□□□□□ -1.12
VARS-225ENST00000482996 C9orf118A6NHY6 69 aa8.02□□□□□ -1.13
VARS-225ENST00000482996 RETNLBQ9BQ08 111 aa8.02□□□□□ -1.13
VARS-225ENST00000482996 H3BUT2 72 aa8.01□□□□□ -1.13
VARS-225ENST00000482996 TAX1BP3O14907 124 aa8.01□□□□□ -1.13
VARS-225ENST00000482996 SCGB1C2P0DMR2 95 aa8.01□□□□□ -1.13
VARS-225ENST00000482996 Q8NBF4 154 aa8□□□□□ -1.13
VARS-225ENST00000482996 FABP2P12104 132 aa7.99□□□□□ -1.13
VARS-225ENST00000482996 IGLV9-49A0A0B4J1Y8 123 aa7.98□□□□□ -1.13
VARS-225ENST00000482996 VAMP3Q15836 100 aa7.98□□□□□ -1.13
VARS-225ENST00000482996 NAA38Q9BRA0 125 aaKnown RBP7.98□□□□□ -1.13
VARS-225ENST00000482996 MOBPQ13875 183 aa7.97□□□□□ -1.13
VARS-225ENST00000482996 SSBP3-AS1Q7Z2R9 100 aa7.97□□□□□ -1.13
VARS-225ENST00000482996 IGLV7-46A0A075B6I9 117 aa7.96□□□□□ -1.14
VARS-225ENST00000482996 A0A1W2PPM0 123 aa7.96□□□□□ -1.14
VARS-225ENST00000482996 SNCGO76070 127 aa7.96□□□□□ -1.14
VARS-225ENST00000482996 SPINK1P00995 79 aa7.96□□□□□ -1.14
VARS-225ENST00000482996 SMIM11BQ8TCY0 68 aa7.96□□□□□ -1.14
VARS-225ENST00000482996 DHRS4-AS1Q9P1J3 65 aa7.96□□□□□ -1.14
VARS-225ENST00000482996 TRIAP1O43715 76 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms