RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 PDE6GP18545 87 aa8.39□□□□□ -1.07
CCDC78-213ENST00000482878 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
CCDC78-213ENST00000482878 C9orf66Q5T8R8 295 aa8.38□□□□□ -1.07
CCDC78-213ENST00000482878 C10orf25Q5T742 122 aa8.37□□□□□ -1.07
CCDC78-213ENST00000482878 CELA1Q9UNI1 258 aa8.37□□□□□ -1.07
CCDC78-213ENST00000482878 KLK12Q9UKR0 248 aa8.36□□□□□ -1.07
CCDC78-213ENST00000482878 LYRM9A8MSI8 78 aa8.35□□□□□ -1.07
CCDC78-213ENST00000482878 PRR4Q16378 134 aa8.35□□□□□ -1.07
CCDC78-213ENST00000482878 UNQ6190/PRO20217Q6UXQ8 127 aa8.35□□□□□ -1.07
CCDC78-213ENST00000482878 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.34□□□□□ -1.07
CCDC78-213ENST00000482878 FAM30AQ9NZY2 134 aa8.34□□□□□ -1.07
CCDC78-213ENST00000482878 APOC4P55056 127 aa8.33□□□□□ -1.08
CCDC78-213ENST00000482878 C3orf84H3BNL1 204 aa8.32□□□□□ -1.08
CCDC78-213ENST00000482878 IGHV4-30-4P0DP06 118 aa8.32□□□□□ -1.08
CCDC78-213ENST00000482878 SPAG11BQ08648 103 aa8.32□□□□□ -1.08
CCDC78-213ENST00000482878 TENM3Q9P273 2699 aa8.32□□□□□ -1.08
CCDC78-213ENST00000482878 CYSRT1A8MQ03 144 aa8.31□□□□□ -1.08
CCDC78-213ENST00000482878 Q6ZTC4 211 aa8.31□□□□□ -1.08
CCDC78-213ENST00000482878 PRR15Q8IV56 129 aa8.31□□□□□ -1.08
CCDC78-213ENST00000482878 DIRC1Q969H9 104 aa8.3□□□□□ -1.08
CCDC78-213ENST00000482878 ERC2-IT1O76042 136 aa8.3□□□□□ -1.08
CCDC78-213ENST00000482878 SPART-AS1P0CW21 52 aa8.29□□□□□ -1.08
CCDC78-213ENST00000482878 A0A0J9YWU9 116 aa8.29□□□□□ -1.08
CCDC78-213ENST00000482878 IGLV6-57P01721 117 aa8.29□□□□□ -1.08
CCDC78-213ENST00000482878 OCR1Q9BZK8 76 aa8.28□□□□□ -1.08
CCDC78-213ENST00000482878 IGKV4-1P06312 121 aa8.28□□□□□ -1.08
CCDC78-213ENST00000482878 HIGD2BQ4VC39 106 aa8.28□□□□□ -1.08
CCDC78-213ENST00000482878 Q8NAQ8 132 aa8.28□□□□□ -1.08
CCDC78-213ENST00000482878 XAGE1AQ9HD64 81 aa8.28□□□□□ -1.08
CCDC78-213ENST00000482878 COX7BP24311 80 aa8.27□□□□□ -1.09
CCDC78-213ENST00000482878 LELP1Q5T871 98 aa8.27□□□□□ -1.09
CCDC78-213ENST00000482878 C1orf64Q8NEQ6 169 aa8.27□□□□□ -1.09
CCDC78-213ENST00000482878 hDV103S1A0JD37 113 aa8.27□□□□□ -1.09
CCDC78-213ENST00000482878 Q6ZRP5 223 aa8.27□□□□□ -1.09
CCDC78-213ENST00000482878 PRR34Q9NV39 138 aa8.26□□□□□ -1.09
CCDC78-213ENST00000482878 SMIM29Q86T20 159 aa8.26□□□□□ -1.09
CCDC78-213ENST00000482878 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
CCDC78-213ENST00000482878 C6orf48Q9UBA6 75 aa8.25□□□□□ -1.09
CCDC78-213ENST00000482878 H3BQ85 93 aa8.25□□□□□ -1.09
CCDC78-213ENST00000482878 Q6ZRU5 148 aa8.24□□□□□ -1.09
CCDC78-213ENST00000482878 DEFB105AQ8NG35 78 aa8.24□□□□□ -1.09
CCDC78-213ENST00000482878 STAB2Q8WWQ8 2551 aa8.24□□□□□ -1.09
CCDC78-213ENST00000482878 TRAV22A0A0B4J277 110 aa8.23□□□□□ -1.09
CCDC78-213ENST00000482878 ZNF73O43830 326 aaPredicted RBP8.23□□□□□ -1.09
CCDC78-213ENST00000482878 SPTSSBQ8NFR3 76 aa8.23□□□□□ -1.09
CCDC78-213ENST00000482878 IGKV2D-24A0A075B6R9 120 aa8.23□□□□□ -1.09
CCDC78-213ENST00000482878 A8MUN3 132 aa8.23□□□□□ -1.09
CCDC78-213ENST00000482878 GVQW2A0A096LPI5 108 aaPredicted RBP8.22□□□□□ -1.09
CCDC78-213ENST00000482878 CD164Q04900 197 aa8.22□□□□□ -1.09
CCDC78-213ENST00000482878 Q1T7F1 81 aa8.2□□□□□ -1.1
CCDC78-213ENST00000482878 A8MU10 97 aa8.19□□□□□ -1.1
CCDC78-213ENST00000482878 KPRPQ5T749 579 aaPredicted RBP8.19□□□□□ -1.1
CCDC78-213ENST00000482878 KRTAP24-1Q3LI83 254 aa8.18□□□□□ -1.1
CCDC78-213ENST00000482878 WFDC10BQ8IUB3 73 aa8.18□□□□□ -1.1
CCDC78-213ENST00000482878 CHKB-CPT1BH3BT56 60 aa8.17□□□□□ -1.1
CCDC78-213ENST00000482878 TENM2Q9NT68 2774 aa8.17□□□□□ -1.1
CCDC78-213ENST00000482878 ELOF1P60002 83 aaKnown RBP8.17□□□□□ -1.1
CCDC78-213ENST00000482878 VPREB1P12018 145 aa8.17□□□□□ -1.1
CCDC78-213ENST00000482878 CAMK2N2Q96S95 79 aa8.16□□□□□ -1.1
CCDC78-213ENST00000482878 DEFB131BA0A096LNP1 70 aa8.15□□□□□ -1.1
CCDC78-213ENST00000482878 KRTAP26-1Q6PEX3 210 aa8.15□□□□□ -1.11
CCDC78-213ENST00000482878 C11orf45Q8TAV5 145 aa8.14□□□□□ -1.11
CCDC78-213ENST00000482878 UBE2BP63146 152 aa8.14□□□□□ -1.11
CCDC78-213ENST00000482878 SYCNQ0VAF6 134 aa8.13□□□□□ -1.11
CCDC78-213ENST00000482878 KRTAP10-11P60412 298 aa8.13□□□□□ -1.11
CCDC78-213ENST00000482878 ETDCA0A1B0GVM5 59 aa8.13□□□□□ -1.11
CCDC78-213ENST00000482878 EGFEM1PQ0D2K5 195 aa8.12□□□□□ -1.11
CCDC78-213ENST00000482878 C15orf56Q8N910 161 aa8.12□□□□□ -1.11
CCDC78-213ENST00000482878 M0R378 163 aa8.12□□□□□ -1.11
CCDC78-213ENST00000482878 PSCAO43653 123 aa8.12□□□□□ -1.11
CCDC78-213ENST00000482878 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
CCDC78-213ENST00000482878 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.1□□□□□ -1.11
CCDC78-213ENST00000482878 ST20-AS1Q8NBB2 130 aa8.1□□□□□ -1.11
CCDC78-213ENST00000482878 PRR15LQ9BU68 103 aa8.1□□□□□ -1.11
CCDC78-213ENST00000482878 UBE2AP49459 152 aa8.1□□□□□ -1.11
CCDC78-213ENST00000482878 RBM12B-AS1Q9P1G2 102 aa8.1□□□□□ -1.11
CCDC78-213ENST00000482878 DEFB116Q30KQ4 102 aa8.09□□□□□ -1.11
CCDC78-213ENST00000482878 KTN1-AS1Q86SY8 53 aa8.08□□□□□ -1.12
CCDC78-213ENST00000482878 A6NED7 52 aa8.07□□□□□ -1.12
CCDC78-213ENST00000482878 Q5VV11 94 aa8.06□□□□□ -1.12
CCDC78-213ENST00000482878 WFDC13Q8IUB5 93 aa8.06□□□□□ -1.12
CCDC78-213ENST00000482878 MP68P56378 58 aa8.06□□□□□ -1.12
CCDC78-213ENST00000482878 HCG22E2RYF7 251 aa8.06□□□□□ -1.12
CCDC78-213ENST00000482878 H3BNG1 76 aa8.06□□□□□ -1.12
CCDC78-213ENST00000482878 K7EQZ3 153 aa8.06□□□□□ -1.12
CCDC78-213ENST00000482878 B9D2Q9BPU9 175 aa8.05□□□□□ -1.12
CCDC78-213ENST00000482878 LINC00208Q96KT6 92 aa8.05□□□□□ -1.12
CCDC78-213ENST00000482878 NDUFB1O75438 58 aa8.04□□□□□ -1.12
CCDC78-213ENST00000482878 UBE2DNLQ8IWF7 75 aa8.04□□□□□ -1.12
CCDC78-213ENST00000482878 ANK2Q01484 3957 aa8.04□□□□□ -1.12
CCDC78-213ENST00000482878 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
CCDC78-213ENST00000482878 LINC00588Q9Y4M8 146 aa8.04□□□□□ -1.12
CCDC78-213ENST00000482878 SERTAD4-AS1Q5TG53 156 aa8.03□□□□□ -1.12
CCDC78-213ENST00000482878 C1orf137Q5JT78 98 aa8.03□□□□□ -1.12
CCDC78-213ENST00000482878 ZCCHC13Q8WW36 166 aaKnown RBP8.03□□□□□ -1.12
CCDC78-213ENST00000482878 CYP4F30PQ9H0H9 118 aa8.03□□□□□ -1.12
CCDC78-213ENST00000482878 IGKV2-24A0A0C4DH68 120 aa8.02□□□□□ -1.13
CCDC78-213ENST00000482878 KCNQ1DNQ9H478 68 aa8.01□□□□□ -1.13
CCDC78-213ENST00000482878 A0A1W2PNM2 257 aa8.01□□□□□ -1.13
CCDC78-213ENST00000482878 RPL37AP8A6NKH3 93 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms