RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CBY1Q9Y3M2 126 aa10.89□□□□□ -0.67
SMIM4-204ENST00000482728 SCGB1D1O95968 90 aa10.88□□□□□ -0.67
SMIM4-204ENST00000482728 OR13C6PQ8NH95 151 aa10.88□□□□□ -0.67
SMIM4-204ENST00000482728 TRAV23DV6A0A075B6W5 121 aa10.87□□□□□ -0.67
SMIM4-204ENST00000482728 LINC00518Q8N0U6 118 aa10.87□□□□□ -0.67
SMIM4-204ENST00000482728 SMCR5Q8TEV8 140 aa10.87□□□□□ -0.67
SMIM4-204ENST00000482728 SPANXDQ9BXN6 97 aa10.87□□□□□ -0.67
SMIM4-204ENST00000482728 ZNF706Q9Y5V0 76 aaPredicted RBP10.87□□□□□ -0.67
SMIM4-204ENST00000482728 B5MCH6 92 aa10.86□□□□□ -0.67
SMIM4-204ENST00000482728 Q6ZVH6 145 aa10.86□□□□□ -0.67
SMIM4-204ENST00000482728 IFITM1P13164 125 aa10.85□□□□□ -0.67
SMIM4-204ENST00000482728 HMCN2Q8NDA2 5059 aa10.84□□□□□ -0.67
SMIM4-204ENST00000482728 ZNF73O43830 326 aaPredicted RBP10.84□□□□□ -0.67
SMIM4-204ENST00000482728 HINT1P49773 126 aaPredicted RBP10.84□□□□□ -0.67
SMIM4-204ENST00000482728 SPRR4Q96PI1 79 aa10.84□□□□□ -0.67
SMIM4-204ENST00000482728 JOSD1Q15040 202 aaPredicted RBP10.83□□□□□ -0.68
SMIM4-204ENST00000482728 KRTAP13-2Q52LG2 175 aa10.82□□□□□ -0.68
SMIM4-204ENST00000482728 Q6ZRX8 168 aa10.82□□□□□ -0.68
SMIM4-204ENST00000482728 TSPAN13O95857 204 aa10.8□□□□□ -0.68
SMIM4-204ENST00000482728 MUSTN1Q8IVN3 82 aa10.8□□□□□ -0.68
SMIM4-204ENST00000482728 PPDPFQ9H3Y8 114 aa10.8□□□□□ -0.68
SMIM4-204ENST00000482728 Q9BRP9 147 aa10.78□□□□□ -0.68
SMIM4-204ENST00000482728 ERC2-IT1O76042 136 aa10.77□□□□□ -0.69
SMIM4-204ENST00000482728 GAGE2AQ6NT46 116 aa10.77□□□□□ -0.69
SMIM4-204ENST00000482728 A6NDN8 102 aa10.76□□□□□ -0.69
SMIM4-204ENST00000482728 LINC00304Q8N9R0 145 aa10.76□□□□□ -0.69
SMIM4-204ENST00000482728 C3orf22Q8N5N4 141 aa10.75□□□□□ -0.69
SMIM4-204ENST00000482728 C6orf99Q4VX62 202 aa10.72□□□□□ -0.69
SMIM4-204ENST00000482728 LINC00483Q53H64 154 aa10.72□□□□□ -0.69
SMIM4-204ENST00000482728 TRAV13-2A0A0B4J235 113 aa10.71□□□□□ -0.69
SMIM4-204ENST00000482728 COX8AP10176 69 aa10.71□□□□□ -0.69
SMIM4-204ENST00000482728 COX7BP24311 80 aa10.71□□□□□ -0.69
SMIM4-204ENST00000482728 PRR4Q16378 134 aa10.71□□□□□ -0.69
SMIM4-204ENST00000482728 DHRS4-AS1Q9P1J3 65 aa10.71□□□□□ -0.69
SMIM4-204ENST00000482728 C4orf48Q5BLP8 95 aa10.7□□□□□ -0.7
SMIM4-204ENST00000482728 SPAG11AQ6PDA7 123 aa10.68□□□□□ -0.7
SMIM4-204ENST00000482728 HIST1H4GQ99525 98 aa10.68□□□□□ -0.7
SMIM4-204ENST00000482728 VAMP8Q9BV40 100 aa10.68□□□□□ -0.7
SMIM4-204ENST00000482728 PAM16Q9Y3D7 125 aa10.68□□□□□ -0.7
SMIM4-204ENST00000482728 TRBV7-6A0A0J9YX20 115 aa10.67□□□□□ -0.7
SMIM4-204ENST00000482728 DLEU1O43261 78 aa10.67□□□□□ -0.7
SMIM4-204ENST00000482728 ELOF1P60002 83 aaKnown RBP10.67□□□□□ -0.7
SMIM4-204ENST00000482728 SPATA45Q537H7 98 aa10.67□□□□□ -0.7
SMIM4-204ENST00000482728 ST20-AS1Q8NBB2 130 aa10.67□□□□□ -0.7
SMIM4-204ENST00000482728 IGLV9-49A0A0B4J1Y8 123 aa10.66□□□□□ -0.7
SMIM4-204ENST00000482728 A4D1N5 150 aa10.66□□□□□ -0.7
SMIM4-204ENST00000482728 CTAG1AP78358 180 aa10.66□□□□□ -0.7
SMIM4-204ENST00000482728 C14orf144Q96I85 54 aa10.66□□□□□ -0.7
SMIM4-204ENST00000482728 Q8NBF4 154 aa10.65□□□□□ -0.7
SMIM4-204ENST00000482728 TMA7Q9Y2S6 64 aaKnown RBP10.65□□□□□ -0.7
SMIM4-204ENST00000482728 A0A1B0GWB2 263 aa10.64□□□□□ -0.71
SMIM4-204ENST00000482728 MOBPQ13875 183 aa10.63□□□□□ -0.71
SMIM4-204ENST00000482728 SSBP3-AS1Q7Z2R9 100 aa10.63□□□□□ -0.71
SMIM4-204ENST00000482728 SMIM11BQ8TCY0 68 aa10.63□□□□□ -0.71
SMIM4-204ENST00000482728 LRP2P98164 4655 aa10.62□□□□□ -0.71
SMIM4-204ENST00000482728 SLC25A34Q6PIV7 304 aa10.62□□□□□ -0.71
SMIM4-204ENST00000482728 VAMP3Q15836 100 aa10.61□□□□□ -0.71
SMIM4-204ENST00000482728 TAL2Q16559 108 aa10.61□□□□□ -0.71
SMIM4-204ENST00000482728 C9orf153Q5TBE3 101 aa10.6□□□□□ -0.71
SMIM4-204ENST00000482728 DEFB105AQ8NG35 78 aa10.59□□□□□ -0.71
SMIM4-204ENST00000482728 RETNLBQ9BQ08 111 aa10.59□□□□□ -0.71
SMIM4-204ENST00000482728 HIGD1BQ9P298 99 aa10.59□□□□□ -0.71
SMIM4-204ENST00000482728 SPINK1P00995 79 aa10.58□□□□□ -0.72
SMIM4-204ENST00000482728 SPRR1BP22528 89 aa10.58□□□□□ -0.72
SMIM4-204ENST00000482728 UBR4Q5T4S7 5183 aa10.57□□□□□ -0.72
SMIM4-204ENST00000482728 C12orf57Q99622 126 aa10.57□□□□□ -0.72
SMIM4-204ENST00000482728 NHP2Q9NX24 153 aaKnown RBP10.57□□□□□ -0.72
SMIM4-204ENST00000482728 LAMTOR3Q9UHA4 124 aa10.57□□□□□ -0.72
SMIM4-204ENST00000482728 SLC25A20O43772 301 aa10.56□□□□□ -0.72
SMIM4-204ENST00000482728 TEX49A0A1B0GTD5 131 aa10.55□□□□□ -0.72
SMIM4-204ENST00000482728 PYY3Q5JQD4 70 aa10.55□□□□□ -0.72
SMIM4-204ENST00000482728 C2orf91Q6ZV80 131 aa10.52□□□□□ -0.73
SMIM4-204ENST00000482728 RAB37Q96AX2 223 aa10.52□□□□□ -0.73
SMIM4-204ENST00000482728 IGLV7-46A0A075B6I9 117 aa10.51□□□□□ -0.73
SMIM4-204ENST00000482728 Q1RN00 199 aa10.51□□□□□ -0.73
SMIM4-204ENST00000482728 H7C2G1 150 aa10.5□□□□□ -0.73
SMIM4-204ENST00000482728 CFC1BP0CG36 223 aa10.49□□□□□ -0.73
SMIM4-204ENST00000482728 CFC1P0CG37 223 aa10.49□□□□□ -0.73
SMIM4-204ENST00000482728 LINC00575Q6W349 94 aa10.49□□□□□ -0.73
SMIM4-204ENST00000482728 LPAP08519 4548 aa10.48□□□□□ -0.73
SMIM4-204ENST00000482728 IGLV5-48A0A075B6I7 105 aa10.48□□□□□ -0.73
SMIM4-204ENST00000482728 RPS29P62273 56 aaKnown RBP10.48□□□□□ -0.73
SMIM4-204ENST00000482728 BVES-AS1Q5T3Y7 98 aa10.48□□□□□ -0.73
SMIM4-204ENST00000482728 CEND1Q8N111 149 aa10.48□□□□□ -0.73
SMIM4-204ENST00000482728 hADV29S1A0JD25 119 aa10.47□□□□□ -0.73
SMIM4-204ENST00000482728 TMEM238LA0A1B0GVL6 79 aa10.46□□□□□ -0.73
SMIM4-204ENST00000482728 A6NJY4 79 aa10.46□□□□□ -0.73
SMIM4-204ENST00000482728 A0A0B4J2C4 111 aa10.45□□□□□ -0.74
SMIM4-204ENST00000482728 LINC01547P58512 204 aaPredicted RBP10.45□□□□□ -0.74
SMIM4-204ENST00000482728 FP248Q71RG6 208 aaPredicted RBP10.45□□□□□ -0.74
SMIM4-204ENST00000482728 PRO1933Q9H354 126 aa10.45□□□□□ -0.74
SMIM4-204ENST00000482728 SMIM29Q86T20 159 aa10.44□□□□□ -0.74
SMIM4-204ENST00000482728 Q8N377 158 aa10.44□□□□□ -0.74
SMIM4-204ENST00000482728 HRCT1Q6UXD1 115 aa10.42□□□□□ -0.74
SMIM4-204ENST00000482728 Q6ZQY7 126 aa10.42□□□□□ -0.74
SMIM4-204ENST00000482728 CDIP1Q9H305 208 aa10.42□□□□□ -0.74
SMIM4-204ENST00000482728 SNCGO76070 127 aa10.41□□□□□ -0.74
SMIM4-204ENST00000482728 TPRXLQ17RH7 258 aa10.41□□□□□ -0.74
SMIM4-204ENST00000482728 PRO1854Q9UHT4 67 aa10.41□□□□□ -0.74
SMIM4-204ENST00000482728 FXYD2P54710 66 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms