RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 PRO0628Q9UI54 55 aa7.73□□□□□ -1.17
SMPD4-218ENST00000482171 NDUFB1O75438 58 aa7.72□□□□□ -1.17
SMPD4-218ENST00000482171 KRTAP10-11P60412 298 aa7.72□□□□□ -1.17
SMPD4-218ENST00000482171 PSPHP1O15172 72 aa7.7□□□□□ -1.18
SMPD4-218ENST00000482171 MRPL55Q7Z7F7 128 aaKnown RBP7.69□□□□□ -1.18
SMPD4-218ENST00000482171 C9orf129Q5T035 196 aaKnown RBP7.69□□□□□ -1.18
SMPD4-218ENST00000482171 B9D2Q9BPU9 175 aa7.69□□□□□ -1.18
SMPD4-218ENST00000482171 NIPBLQ6KC79 2804 aaeCLIP7.67□□□□□ -1.18
SMPD4-218ENST00000482171 TM2D3Q9BRN9 247 aa7.67□□□□□ -1.18
SMPD4-218ENST00000482171 C6orf48Q9UBA6 75 aa7.67□□□□□ -1.18
SMPD4-218ENST00000482171 CHKB-CPT1BH3BT56 60 aa7.67□□□□□ -1.18
SMPD4-218ENST00000482171 NUPR2A6NF83 97 aa7.66□□□□□ -1.18
SMPD4-218ENST00000482171 CXCL6P80162 114 aa7.66□□□□□ -1.18
SMPD4-218ENST00000482171 LINC01556Q5JQF7 62 aa7.66□□□□□ -1.18
SMPD4-218ENST00000482171 C1orf137Q5JT78 98 aa7.66□□□□□ -1.18
SMPD4-218ENST00000482171 Q6ZQT0 140 aa7.66□□□□□ -1.18
SMPD4-218ENST00000482171 A6NED7 52 aa7.65□□□□□ -1.18
SMPD4-218ENST00000482171 LINC00208Q96KT6 92 aa7.65□□□□□ -1.18
SMPD4-218ENST00000482171 PMAIP1Q13794 54 aa7.64□□□□□ -1.19
SMPD4-218ENST00000482171 DHRS4-AS1Q9P1J3 65 aa7.64□□□□□ -1.19
SMPD4-218ENST00000482171 IGKV4-1P06312 121 aa7.64□□□□□ -1.19
SMPD4-218ENST00000482171 C2orf48Q96LS8 159 aa7.64□□□□□ -1.19
SMPD4-218ENST00000482171 LINC00588Q9Y4M8 146 aa7.64□□□□□ -1.19
SMPD4-218ENST00000482171 K7EIL1 84 aa7.63□□□□□ -1.19
SMPD4-218ENST00000482171 DEFB116Q30KQ4 102 aa7.63□□□□□ -1.19
SMPD4-218ENST00000482171 MXRA5Q9NR99 2828 aa7.61□□□□□ -1.19
SMPD4-218ENST00000482171 MDFIQ99750 246 aa7.61□□□□□ -1.19
SMPD4-218ENST00000482171 LINC00474Q9P2X8 69 aa7.61□□□□□ -1.19
SMPD4-218ENST00000482171 H3BNG1 76 aa7.6□□□□□ -1.19
SMPD4-218ENST00000482171 LINC00336Q6ZUF6 198 aa7.6□□□□□ -1.19
SMPD4-218ENST00000482171 SMIM29Q86T20 159 aa7.6□□□□□ -1.19
SMPD4-218ENST00000482171 PRLHP81277 87 aa7.59□□□□□ -1.19
SMPD4-218ENST00000482171 BCE1O60756 84 aa7.59□□□□□ -1.19
SMPD4-218ENST00000482171 FAM104AQ969W3 186 aa7.59□□□□□ -1.19
SMPD4-218ENST00000482171 IGLV9-49A0A0B4J1Y8 123 aa7.59□□□□□ -1.19
SMPD4-218ENST00000482171 LINC00612Q8N6U2 182 aa7.58□□□□□ -1.2
SMPD4-218ENST00000482171 C7orf33Q8WU49 177 aa7.58□□□□□ -1.2
SMPD4-218ENST00000482171 PRR15LQ9BU68 103 aa7.58□□□□□ -1.2
SMPD4-218ENST00000482171 C22orf24Q9Y442 160 aa7.58□□□□□ -1.2
SMPD4-218ENST00000482171 REG3GQ6UW15 175 aa7.58□□□□□ -1.2
SMPD4-218ENST00000482171 LINC01600Q96MT4 127 aa7.58□□□□□ -1.2
SMPD4-218ENST00000482171 LOC110117498A0A087WWA1 95 aa7.57□□□□□ -1.2
SMPD4-218ENST00000482171 KMT2BQ9UMN6 2715 aaPredicted RBP7.56□□□□□ -1.2
SMPD4-218ENST00000482171 KIAA0087Q14695 138 aa7.56□□□□□ -1.2
SMPD4-218ENST00000482171 SPINK6Q6UWN8 80 aa7.56□□□□□ -1.2
SMPD4-218ENST00000482171 A0A087WSZ3 146 aa7.55□□□□□ -1.2
SMPD4-218ENST00000482171 H7BZZ5 65 aa7.55□□□□□ -1.2
SMPD4-218ENST00000482171 SMG1Q96Q15 3661 aaKnown RBP7.55□□□□□ -1.2
SMPD4-218ENST00000482171 SEC61GP60059 68 aa7.55□□□□□ -1.2
SMPD4-218ENST00000482171 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
SMPD4-218ENST00000482171 LINC00167Q96N53 147 aa7.55□□□□□ -1.2
SMPD4-218ENST00000482171 IGLV5-52A0A0A0MRZ9 124 aa7.54□□□□□ -1.2
SMPD4-218ENST00000482171 Q6ZRP5 223 aa7.53□□□□□ -1.2
SMPD4-218ENST00000482171 CYSTM1Q9H1C7 97 aa7.53□□□□□ -1.2
SMPD4-218ENST00000482171 KLKP1Q107X0 134 aa7.52□□□□□ -1.2
SMPD4-218ENST00000482171 C1orf134Q5TEV5 83 aa7.52□□□□□ -1.2
SMPD4-218ENST00000482171 CHTF8P0CG12 524 aa7.52□□□□□ -1.21
SMPD4-218ENST00000482171 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
SMPD4-218ENST00000482171 F8WDY8 70 aa7.51□□□□□ -1.21
SMPD4-218ENST00000482171 DNAH10OSP0CZ25 163 aa7.51□□□□□ -1.21
SMPD4-218ENST00000482171 ELOF1P60002 83 aaKnown RBP7.51□□□□□ -1.21
SMPD4-218ENST00000482171 PCOTHQ58A44 107 aa7.51□□□□□ -1.21
SMPD4-218ENST00000482171 PRR34Q9NV39 138 aa7.51□□□□□ -1.21
SMPD4-218ENST00000482171 CELSR1Q9NYQ6 3014 aa7.51□□□□□ -1.21
SMPD4-218ENST00000482171 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
SMPD4-218ENST00000482171 CASC2Q6XLA1 102 aa7.5□□□□□ -1.21
SMPD4-218ENST00000482171 H0Y9P7 68 aa7.49□□□□□ -1.21
SMPD4-218ENST00000482171 STAB2Q8WWQ8 2551 aa7.49□□□□□ -1.21
SMPD4-218ENST00000482171 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
SMPD4-218ENST00000482171 GVQW2A0A096LPI5 108 aaPredicted RBP7.48□□□□□ -1.21
SMPD4-218ENST00000482171 IGLV6-57P01721 117 aa7.48□□□□□ -1.21
SMPD4-218ENST00000482171 Q9BRP9 147 aa7.48□□□□□ -1.21
SMPD4-218ENST00000482171 PHF5AQ7RTV0 110 aaKnown RBP7.47□□□□□ -1.21
SMPD4-218ENST00000482171 C15orf56Q8N910 161 aa7.47□□□□□ -1.21
SMPD4-218ENST00000482171 VPREB1P12018 145 aa7.47□□□□□ -1.21
SMPD4-218ENST00000482171 CASC10Q5T4H9 136 aa7.47□□□□□ -1.21
SMPD4-218ENST00000482171 SERTAD4-AS1Q5TG53 156 aa7.47□□□□□ -1.21
SMPD4-218ENST00000482171 CSMD1Q96PZ7 3565 aa7.46□□□□□ -1.22
SMPD4-218ENST00000482171 ST20-AS1Q8NBB2 130 aa7.45□□□□□ -1.22
SMPD4-218ENST00000482171 OBSCN-AS1Q96MR7 158 aa7.45□□□□□ -1.22
SMPD4-218ENST00000482171 TENM4Q6N022 2769 aa7.44□□□□□ -1.22
SMPD4-218ENST00000482171 Q8NBF4 154 aa7.43□□□□□ -1.22
SMPD4-218ENST00000482171 CIRBP-AS1Q8TBR5 109 aa7.43□□□□□ -1.22
SMPD4-218ENST00000482171 hDV103S1A0JD37 113 aa7.43□□□□□ -1.22
SMPD4-218ENST00000482171 C1orf64Q8NEQ6 169 aa7.43□□□□□ -1.22
SMPD4-218ENST00000482171 ZNF706Q9Y5V0 76 aaPredicted RBP7.42□□□□□ -1.22
SMPD4-218ENST00000482171 A8MUN3 132 aa7.41□□□□□ -1.22
SMPD4-218ENST00000482171 SVEP1Q4LDE5 3571 aa7.41□□□□□ -1.22
SMPD4-218ENST00000482171 TRBV7-4A0A0J9YYF1 115 aa7.41□□□□□ -1.22
SMPD4-218ENST00000482171 Q6ZRX8 168 aa7.4□□□□□ -1.22
SMPD4-218ENST00000482171 K7EQZ3 153 aa7.4□□□□□ -1.23
SMPD4-218ENST00000482171 ERC2-IT1O76042 136 aa7.39□□□□□ -1.23
SMPD4-218ENST00000482171 IGHV6-1A0A0B4J1U7 121 aa7.39□□□□□ -1.23
SMPD4-218ENST00000482171 C16orf90A8MZG2 172 aa7.39□□□□□ -1.23
SMPD4-218ENST00000482171 Q5XG85 94 aa7.39□□□□□ -1.23
SMPD4-218ENST00000482171 LINC00528Q8N1L1 170 aa7.39□□□□□ -1.23
SMPD4-218ENST00000482171 LIMD2Q9BT23 127 aa7.39□□□□□ -1.23
SMPD4-218ENST00000482171 WIPF1O43516 503 aa7.39□□□□□ -1.23
SMPD4-218ENST00000482171 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
SMPD4-218ENST00000482171 LINC00476Q8WZB0 136 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms