RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 LINC01600Q96MT4 127 aa6.37□□□□□ -1.39
SSBP1-210ENST00000481508 TIMM17BO60830 172 aa6.36□□□□□ -1.39
SSBP1-210ENST00000481508 KRTAP1-4P0C5Y4 121 aa6.36□□□□□ -1.39
SSBP1-210ENST00000481508 PRLHP81277 87 aa6.36□□□□□ -1.39
SSBP1-210ENST00000481508 DIRC1Q969H9 104 aa6.36□□□□□ -1.39
SSBP1-210ENST00000481508 TMEM126AQ9H061 195 aa6.36□□□□□ -1.39
SSBP1-210ENST00000481508 TRBV10-3A0A0K0K1G6 114 aa6.35□□□□□ -1.39
SSBP1-210ENST00000481508 REG3GQ6UW15 175 aa6.35□□□□□ -1.39
SSBP1-210ENST00000481508 LINC00308Q8TCZ7 52 aa6.35□□□□□ -1.39
SSBP1-210ENST00000481508 KRTAP10-8P60410 259 aa6.34□□□□□ -1.39
SSBP1-210ENST00000481508 SCGB1D1O95968 90 aa6.33□□□□□ -1.4
SSBP1-210ENST00000481508 RPL28P46779 137 aaKnown RBP6.33□□□□□ -1.4
SSBP1-210ENST00000481508 UBE2AP49459 152 aa6.33□□□□□ -1.4
SSBP1-210ENST00000481508 FAM19A1Q7Z5A9 133 aa6.33□□□□□ -1.4
SSBP1-210ENST00000481508 TMA7Q9Y2S6 64 aaKnown RBP6.33□□□□□ -1.4
SSBP1-210ENST00000481508 NDUFC2O95298 119 aa6.32□□□□□ -1.4
SSBP1-210ENST00000481508 SPRR1AP35321 89 aa6.32□□□□□ -1.4
SSBP1-210ENST00000481508 PRR26Q8N8Z3 221 aa6.32□□□□□ -1.4
SSBP1-210ENST00000481508 MIEN1Q9BRT3 115 aa6.32□□□□□ -1.4
SSBP1-210ENST00000481508 KCNQ1DNQ9H478 68 aa6.32□□□□□ -1.4
SSBP1-210ENST00000481508 SPANXB1Q9NS25 103 aaPredicted RBP6.32□□□□□ -1.4
SSBP1-210ENST00000481508 MUC2Q02817 5179 aa6.31□□□□□ -1.4
SSBP1-210ENST00000481508 TRBV10-2A0A0K0K1G8 114 aa6.31□□□□□ -1.4
SSBP1-210ENST00000481508 KRTAP4-16G5E9R7 235 aaPredicted RBP6.31□□□□□ -1.4
SSBP1-210ENST00000481508 PRYO14603 147 aa6.31□□□□□ -1.4
SSBP1-210ENST00000481508 IGLV6-57P01721 117 aa6.31□□□□□ -1.4
SSBP1-210ENST00000481508 DDTP30046 118 aa6.31□□□□□ -1.4
SSBP1-210ENST00000481508 AKR1D1P51857 326 aa6.31□□□□□ -1.4
SSBP1-210ENST00000481508 SCGB1D4Q6XE38 83 aa6.31□□□□□ -1.4
SSBP1-210ENST00000481508 SPANXDQ9BXN6 97 aa6.31□□□□□ -1.4
SSBP1-210ENST00000481508 SPANXCQ9NY87 97 aa6.31□□□□□ -1.4
SSBP1-210ENST00000481508 ANAPC11Q9NYG5 84 aa6.31□□□□□ -1.4
SSBP1-210ENST00000481508 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
SSBP1-210ENST00000481508 A0A087X002 238 aa6.28□□□□□ -1.4
SSBP1-210ENST00000481508 JOSD1Q15040 202 aaPredicted RBP6.28□□□□□ -1.4
SSBP1-210ENST00000481508 MUSTN1Q8IVN3 82 aa6.28□□□□□ -1.4
SSBP1-210ENST00000481508 LINC00337Q8N6G1 96 aa6.28□□□□□ -1.4
SSBP1-210ENST00000481508 LPAP08519 4548 aa6.27□□□□□ -1.4
SSBP1-210ENST00000481508 B5MCH6 92 aa6.27□□□□□ -1.41
SSBP1-210ENST00000481508 S100A7L2Q5SY68 101 aa6.27□□□□□ -1.41
SSBP1-210ENST00000481508 SMCR5Q8TEV8 140 aa6.27□□□□□ -1.41
SSBP1-210ENST00000481508 TRAV23DV6A0A075B6W5 121 aa6.26□□□□□ -1.41
SSBP1-210ENST00000481508 ERC2-IT1O76042 136 aa6.26□□□□□ -1.41
SSBP1-210ENST00000481508 COX8AP10176 69 aa6.26□□□□□ -1.41
SSBP1-210ENST00000481508 HIGD2AQ9BW72 106 aa6.26□□□□□ -1.41
SSBP1-210ENST00000481508 PAM16Q9Y3D7 125 aa6.26□□□□□ -1.41
SSBP1-210ENST00000481508 ETDCA0A1B0GVM5 59 aa6.25□□□□□ -1.41
SSBP1-210ENST00000481508 IFITM1P13164 125 aa6.25□□□□□ -1.41
SSBP1-210ENST00000481508 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
SSBP1-210ENST00000481508 SPATA45Q537H7 98 aa6.25□□□□□ -1.41
SSBP1-210ENST00000481508 PYY3Q5JQD4 70 aa6.25□□□□□ -1.41
SSBP1-210ENST00000481508 Q9BRP9 147 aa6.25□□□□□ -1.41
SSBP1-210ENST00000481508 OR13C6PQ8NH95 151 aa6.24□□□□□ -1.41
SSBP1-210ENST00000481508 C14orf144Q96I85 54 aa6.24□□□□□ -1.41
SSBP1-210ENST00000481508 PPDPFQ9H3Y8 114 aa6.24□□□□□ -1.41
SSBP1-210ENST00000481508 ZNF73O43830 326 aaPredicted RBP6.23□□□□□ -1.41
SSBP1-210ENST00000481508 Q6ZVH6 145 aa6.23□□□□□ -1.41
SSBP1-210ENST00000481508 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
SSBP1-210ENST00000481508 VAMP8Q9BV40 100 aa6.23□□□□□ -1.41
SSBP1-210ENST00000481508 Q6ZRX8 168 aa6.22□□□□□ -1.41
SSBP1-210ENST00000481508 C2orf91Q6ZV80 131 aa6.22□□□□□ -1.41
SSBP1-210ENST00000481508 DLEU1O43261 78 aa6.21□□□□□ -1.42
SSBP1-210ENST00000481508 LINC00518Q8N0U6 118 aa6.21□□□□□ -1.42
SSBP1-210ENST00000481508 C3orf22Q8N5N4 141 aa6.21□□□□□ -1.42
SSBP1-210ENST00000481508 A4D1N5 150 aa6.2□□□□□ -1.42
SSBP1-210ENST00000481508 CRYGAP11844 174 aa6.2□□□□□ -1.42
SSBP1-210ENST00000481508 S100A12P80511 92 aa6.2□□□□□ -1.42
SSBP1-210ENST00000481508 RPL13AP40429 203 aaKnown RBP6.19□□□□□ -1.42
SSBP1-210ENST00000481508 FAM229BQ4G0N7 80 aa6.19□□□□□ -1.42
SSBP1-210ENST00000481508 C6orf99Q4VX62 202 aa6.19□□□□□ -1.42
SSBP1-210ENST00000481508 ST20-AS1Q8NBB2 130 aa6.19□□□□□ -1.42
SSBP1-210ENST00000481508 COPS9Q8WXC6 57 aa6.19□□□□□ -1.42
SSBP1-210ENST00000481508 C12orf57Q99622 126 aa6.19□□□□□ -1.42
SSBP1-210ENST00000481508 A6NDN8 102 aa6.18□□□□□ -1.42
SSBP1-210ENST00000481508 TYMSOSQ8TAI1 123 aa6.18□□□□□ -1.42
SSBP1-210ENST00000481508 COX7BP24311 80 aa6.17□□□□□ -1.42
SSBP1-210ENST00000481508 ELOF1P60002 83 aaKnown RBP6.17□□□□□ -1.42
SSBP1-210ENST00000481508 LINC00483Q53H64 154 aa6.17□□□□□ -1.42
SSBP1-210ENST00000481508 GAGE2AQ6NT46 116 aa6.17□□□□□ -1.42
SSBP1-210ENST00000481508 SLC25A34Q6PIV7 304 aa6.17□□□□□ -1.42
SSBP1-210ENST00000481508 SMIM11BQ8TCY0 68 aa6.17□□□□□ -1.42
SSBP1-210ENST00000481508 HIST1H4GQ99525 98 aa6.17□□□□□ -1.42
SSBP1-210ENST00000481508 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
SSBP1-210ENST00000481508 HIGD1BQ9P298 99 aa6.16□□□□□ -1.42
SSBP1-210ENST00000481508 ZNF706Q9Y5V0 76 aaPredicted RBP6.16□□□□□ -1.42
SSBP1-210ENST00000481508 TRAV13-2A0A0B4J235 113 aa6.15□□□□□ -1.42
SSBP1-210ENST00000481508 TSPAN13O95857 204 aa6.14□□□□□ -1.43
SSBP1-210ENST00000481508 CBY1Q9Y3M2 126 aa6.14□□□□□ -1.43
SSBP1-210ENST00000481508 CFC1BP0CG36 223 aa6.13□□□□□ -1.43
SSBP1-210ENST00000481508 CFC1P0CG37 223 aa6.13□□□□□ -1.43
SSBP1-210ENST00000481508 HINT1P49773 126 aaPredicted RBP6.13□□□□□ -1.43
SSBP1-210ENST00000481508 LINC00304Q8N9R0 145 aa6.12□□□□□ -1.43
SSBP1-210ENST00000481508 IGLV9-49A0A0B4J1Y8 123 aa6.11□□□□□ -1.43
SSBP1-210ENST00000481508 TRBV7-6A0A0J9YX20 115 aa6.11□□□□□ -1.43
SSBP1-210ENST00000481508 A0A1B0GWB2 263 aa6.11□□□□□ -1.43
SSBP1-210ENST00000481508 FXYD2P54710 66 aa6.11□□□□□ -1.43
SSBP1-210ENST00000481508 MOBPQ13875 183 aa6.11□□□□□ -1.43
SSBP1-210ENST00000481508 Q8NBF4 154 aa6.11□□□□□ -1.43
SSBP1-210ENST00000481508 DHRS4-AS1Q9P1J3 65 aa6.11□□□□□ -1.43
SSBP1-210ENST00000481508 SPRR1BP22528 89 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms