RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 M0R135 149 aa4.05□□□□□ -1.76
LSM5-210ENST00000480956 ARMS2P0C7Q2 107 aa4.05□□□□□ -1.76
LSM5-210ENST00000480956 NMES1Q9C002 83 aa4.05□□□□□ -1.76
LSM5-210ENST00000480956 LINC01558Q9Y6Z2 57 aa4.05□□□□□ -1.76
LSM5-210ENST00000480956 CADP27708 2225 aa4.04□□□□□ -1.76
LSM5-210ENST00000480956 USP9XQ93008 2570 aaPredicted RBP4.04□□□□□ -1.76
LSM5-210ENST00000480956 CSMD2Q7Z408 3487 aa4.04□□□□□ -1.76
LSM5-210ENST00000480956 LINC00208Q96KT6 92 aa4.04□□□□□ -1.76
LSM5-210ENST00000480956 DCHS2Q6V1P9 2916 aa4.04□□□□□ -1.76
LSM5-210ENST00000480956 CRYBG3Q68DQ2 2970 aa4.04□□□□□ -1.76
LSM5-210ENST00000480956 FAM208BQ5VWN6 2430 aa4.04□□□□□ -1.76
LSM5-210ENST00000480956 A0A087WTM6 91 aa4.04□□□□□ -1.76
LSM5-210ENST00000480956 UMAD1C9J7I0 102 aa4.04□□□□□ -1.76
LSM5-210ENST00000480956 LEPROTL1O95214 131 aa4.04□□□□□ -1.76
LSM5-210ENST00000480956 PRR15LQ9BU68 103 aa4.04□□□□□ -1.76
LSM5-210ENST00000480956 ICE1Q9Y2F5 2266 aa4.03□□□□□ -1.76
LSM5-210ENST00000480956 ROS1P08922 2347 aa4.03□□□□□ -1.76
LSM5-210ENST00000480956 NBPF19A0A087WUL8 3843 aa4.03□□□□□ -1.76
LSM5-210ENST00000480956 PLGLAQ15195 96 aa4.03□□□□□ -1.76
LSM5-210ENST00000480956 UBR5O95071 2799 aaPredicted RBP4.03□□□□□ -1.76
LSM5-210ENST00000480956 PKDREJQ9NTG1 2253 aa4.03□□□□□ -1.76
LSM5-210ENST00000480956 A0A087WWC5 75 aa4.02□□□□□ -1.77
LSM5-210ENST00000480956 CEBPZOSA8MTT3 80 aa4.02□□□□□ -1.77
LSM5-210ENST00000480956 BAGE2Q86Y30 109 aa4.02□□□□□ -1.77
LSM5-210ENST00000480956 PLCE1Q9P212 2302 aa4.02□□□□□ -1.77
LSM5-210ENST00000480956 GCN1Q92616 2671 aaKnown RBP4.02□□□□□ -1.77
LSM5-210ENST00000480956 LRRK2Q5S007 2527 aa4.02□□□□□ -1.77
LSM5-210ENST00000480956 ANKHD1Q8IWZ3 2542 aaKnown RBP4.02□□□□□ -1.77
LSM5-210ENST00000480956 VPS13CQ709C8 3753 aa4.02□□□□□ -1.77
LSM5-210ENST00000480956 CSMD1Q96PZ7 3565 aa4.02□□□□□ -1.77
LSM5-210ENST00000480956 CENPEQ02224 2701 aa4.02□□□□□ -1.77
LSM5-210ENST00000480956 TRGV2A0A075B6R0 118 aa4.01□□□□□ -1.77
LSM5-210ENST00000480956 M0R3E3 92 aa4.01□□□□□ -1.77
LSM5-210ENST00000480956 GDF5OSQ5U4N7 250 aa4.01□□□□□ -1.77
LSM5-210ENST00000480956 SPTAN1Q13813 2472 aaKnown RBP4.01□□□□□ -1.77
LSM5-210ENST00000480956 TACC2O95359 2948 aa4.01□□□□□ -1.77
LSM5-210ENST00000480956 CTXND1A0A1B0GTU2 59 aa4.01□□□□□ -1.77
LSM5-210ENST00000480956 UQCR11O14957 56 aa4.01□□□□□ -1.77
LSM5-210ENST00000480956 KRTAP10-8P60410 259 aa4.01□□□□□ -1.77
LSM5-210ENST00000480956 DEFB121Q5J5C9 76 aa4.01□□□□□ -1.77
LSM5-210ENST00000480956 AKAP6Q13023 2319 aa4□□□□□ -1.77
LSM5-210ENST00000480956 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4□□□□□ -1.77
LSM5-210ENST00000480956 D6R8Y8 96 aa4□□□□□ -1.77
LSM5-210ENST00000480956 MUSTN1Q8IVN3 82 aa4□□□□□ -1.77
LSM5-210ENST00000480956 BAGE3Q86Y29 109 aa3.99□□□□□ -1.77
LSM5-210ENST00000480956 DOPEY1Q5JWR5 2465 aa3.99□□□□□ -1.77
LSM5-210ENST00000480956 DOPEY2Q9Y3R5 2298 aa3.98□□□□□ -1.77
LSM5-210ENST00000480956 TFF3Q07654 80 aa3.98□□□□□ -1.77
LSM5-210ENST00000480956 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
LSM5-210ENST00000480956 HELZ2Q9BYK8 2649 aaKnown RBP3.98□□□□□ -1.77
LSM5-210ENST00000480956 CELSR2Q9HCU4 2923 aa3.98□□□□□ -1.77
LSM5-210ENST00000480956 SVEP1Q4LDE5 3571 aa3.98□□□□□ -1.77
LSM5-210ENST00000480956 POLQO75417 2590 aa3.97□□□□□ -1.77
LSM5-210ENST00000480956 MAP1AP78559 2803 aaPredicted RBP3.97□□□□□ -1.77
LSM5-210ENST00000480956 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
LSM5-210ENST00000480956 FBN2P35556 2912 aa3.97□□□□□ -1.77
LSM5-210ENST00000480956 ASH1LQ9NR48 2969 aaKnown RBP3.97□□□□□ -1.77
LSM5-210ENST00000480956 USP9YO00507 2555 aaPredicted RBP3.96□□□□□ -1.77
LSM5-210ENST00000480956 DEFB108AA8MXU0 73 aa3.96□□□□□ -1.78
LSM5-210ENST00000480956 C6orf201Q7Z4U5 140 aa3.96□□□□□ -1.78
LSM5-210ENST00000480956 ABCA12Q86UK0 2595 aa3.96□□□□□ -1.78
LSM5-210ENST00000480956 LYNX1G3V0Z9 82 aa3.95□□□□□ -1.78
LSM5-210ENST00000480956 MGPP08493 103 aa3.95□□□□□ -1.78
LSM5-210ENST00000480956 LYNX1P0DP58 116 aa3.95□□□□□ -1.78
LSM5-210ENST00000480956 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
LSM5-210ENST00000480956 PIGYQ3MUY2 71 aa3.95□□□□□ -1.78
LSM5-210ENST00000480956 USF3Q68DE3 2245 aa3.95□□□□□ -1.78
LSM5-210ENST00000480956 HECTD1Q9ULT8 2610 aa3.95□□□□□ -1.78
LSM5-210ENST00000480956 Q6ZQY7 126 aa3.95□□□□□ -1.78
LSM5-210ENST00000480956 ANKRD17O75179 2603 aaKnown RBP3.94□□□□□ -1.78
LSM5-210ENST00000480956 J3QKU1 62 aa3.94□□□□□ -1.78
LSM5-210ENST00000480956 DEFB108BQ8NET1 73 aa3.94□□□□□ -1.78
LSM5-210ENST00000480956 FASNP49327 2511 aaKnown RBP3.94□□□□□ -1.78
LSM5-210ENST00000480956 PTPN13Q12923 2485 aa3.94□□□□□ -1.78
LSM5-210ENST00000480956 ZFHX3Q15911 3703 aa3.93□□□□□ -1.78
LSM5-210ENST00000480956 SPG11Q96JI7 2443 aa3.93□□□□□ -1.78
LSM5-210ENST00000480956 Q96NJ1 140 aa3.93□□□□□ -1.78
LSM5-210ENST00000480956 A0A087WVE0 104 aa3.92□□□□□ -1.78
LSM5-210ENST00000480956 ARHGAP5-AS1Q96IT6 56 aa3.92□□□□□ -1.78
LSM5-210ENST00000480956 TRGV1A0A0A0MS02 117 aa3.92□□□□□ -1.78
LSM5-210ENST00000480956 IGKV4-1P06312 121 aa3.92□□□□□ -1.78
LSM5-210ENST00000480956 COX6B1P14854 86 aa3.92□□□□□ -1.78
LSM5-210ENST00000480956 ZNF137PP52743 207 aa3.92□□□□□ -1.78
LSM5-210ENST00000480956 Q6JHZ5 121 aa3.92□□□□□ -1.78
LSM5-210ENST00000480956 CELSR1Q9NYQ6 3014 aa3.91□□□□□ -1.78
LSM5-210ENST00000480956 PRB3Q04118 309 aaPredicted RBP3.91□□□□□ -1.78
LSM5-210ENST00000480956 CCL19Q99731 98 aa3.91□□□□□ -1.78
LSM5-210ENST00000480956 APCP25054 2843 aa3.91□□□□□ -1.78
LSM5-210ENST00000480956 ZNF469Q96JG9 3925 aaPredicted RBP3.9□□□□□ -1.78
LSM5-210ENST00000480956 PRH1P02810 166 aa3.9□□□□□ -1.78
LSM5-210ENST00000480956 OBSCN-AS1Q96MR7 158 aa3.9□□□□□ -1.78
LSM5-210ENST00000480956 ABCA2Q9BZC7 2435 aa3.9□□□□□ -1.79
LSM5-210ENST00000480956 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
LSM5-210ENST00000480956 GCHFRP30047 84 aa3.89□□□□□ -1.79
LSM5-210ENST00000480956 ITPR2Q14571 2701 aa3.89□□□□□ -1.79
LSM5-210ENST00000480956 UNC79Q9P2D8 2635 aa3.88□□□□□ -1.79
LSM5-210ENST00000480956 LEAP2Q969E1 77 aa3.88□□□□□ -1.79
LSM5-210ENST00000480956 GAFA1Q96PS6 74 aa3.88□□□□□ -1.79
LSM5-210ENST00000480956 LINC00846Q9NV44 126 aa3.88□□□□□ -1.79
LSM5-210ENST00000480956 MED13LQ71F56 2210 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms