RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 H0Y8G0 127 aa3.61□□□□□ -1.83
VPS50-215ENST00000480943 FAM19A2Q8N3H0 131 aa3.61□□□□□ -1.83
VPS50-215ENST00000480943 Q8NDZ9 215 aa3.61□□□□□ -1.83
VPS50-215ENST00000480943 TRGC2P03986 189 aa3.6□□□□□ -1.83
VPS50-215ENST00000480943 LINC00158P58513 81 aa3.6□□□□□ -1.83
VPS50-215ENST00000480943 PRLHP81277 87 aa3.6□□□□□ -1.83
VPS50-215ENST00000480943 COX17Q14061 63 aa3.6□□□□□ -1.83
VPS50-215ENST00000480943 SFTA2Q6UW10 78 aa3.6□□□□□ -1.83
VPS50-215ENST00000480943 FAM19A1Q7Z5A9 133 aa3.6□□□□□ -1.83
VPS50-215ENST00000480943 TMEM126AQ9H061 195 aa3.6□□□□□ -1.83
VPS50-215ENST00000480943 ANAPC11Q9NYG5 84 aa3.6□□□□□ -1.83
VPS50-215ENST00000480943 RNF213Q63HN8 5207 aa3.59□□□□□ -1.83
VPS50-215ENST00000480943 TMEM238C9JI98 176 aa3.59□□□□□ -1.83
VPS50-215ENST00000480943 SMIM13P0DJ93 91 aa3.59□□□□□ -1.83
VPS50-215ENST00000480943 PRR4Q16378 134 aa3.59□□□□□ -1.83
VPS50-215ENST00000480943 MEIG1Q5JSS6 88 aa3.59□□□□□ -1.83
VPS50-215ENST00000480943 KRTAP13-1Q8IUC0 172 aa3.59□□□□□ -1.83
VPS50-215ENST00000480943 TYMSOSQ8TAI1 123 aa3.59□□□□□ -1.83
VPS50-215ENST00000480943 M0R378 163 aa3.58□□□□□ -1.84
VPS50-215ENST00000480943 NCR3O14931 201 aa3.58□□□□□ -1.84
VPS50-215ENST00000480943 ATP6V1G1O75348 118 aa3.58□□□□□ -1.84
VPS50-215ENST00000480943 SERF1AO75920 110 aa3.58□□□□□ -1.84
VPS50-215ENST00000480943 LEPROTL1O95214 131 aa3.58□□□□□ -1.84
VPS50-215ENST00000480943 TSPAN13O95857 204 aa3.58□□□□□ -1.84
VPS50-215ENST00000480943 CRYGAP11844 174 aa3.58□□□□□ -1.84
VPS50-215ENST00000480943 SLC7A5P1Q8MH63 180 aa3.58□□□□□ -1.84
VPS50-215ENST00000480943 FABP4P15090 132 aa3.57□□□□□ -1.84
VPS50-215ENST00000480943 KRTAP13-2Q52LG2 175 aa3.57□□□□□ -1.84
VPS50-215ENST00000480943 MIR7-3HGQ8N6C7 128 aa3.57□□□□□ -1.84
VPS50-215ENST00000480943 PMCHL2Q9BQD1 86 aa3.57□□□□□ -1.84
VPS50-215ENST00000480943 NDUFA12Q9UI09 145 aa3.57□□□□□ -1.84
VPS50-215ENST00000480943 MYMXA0A1B0GTQ4 84 aa3.56□□□□□ -1.84
VPS50-215ENST00000480943 LEPROTO15243 131 aa3.56□□□□□ -1.84
VPS50-215ENST00000480943 TSPEAR-AS2P59090 65 aa3.56□□□□□ -1.84
VPS50-215ENST00000480943 HERV-K104P63124 156 aa3.56□□□□□ -1.84
VPS50-215ENST00000480943 FAM229BQ4G0N7 80 aa3.56□□□□□ -1.84
VPS50-215ENST00000480943 BOD1L2Q8IYS8 172 aa3.56□□□□□ -1.84
VPS50-215ENST00000480943 HIGD2AQ9BW72 106 aa3.56□□□□□ -1.84
VPS50-215ENST00000480943 IGKV2D-26A0A0A0MRZ7 120 aa3.55□□□□□ -1.84
VPS50-215ENST00000480943 COLCA2A8K830 154 aa3.55□□□□□ -1.84
VPS50-215ENST00000480943 DPM2O94777 84 aa3.55□□□□□ -1.84
VPS50-215ENST00000480943 PLNP26678 52 aa3.55□□□□□ -1.84
VPS50-215ENST00000480943 HERVK_113P61574 105 aa3.55□□□□□ -1.84
VPS50-215ENST00000480943 DAND5Q8N907 189 aa3.55□□□□□ -1.84
VPS50-215ENST00000480943 LINC00304Q8N9R0 145 aa3.55□□□□□ -1.84
VPS50-215ENST00000480943 PLEKHB2Q96CS7 222 aa3.55□□□□□ -1.84
VPS50-215ENST00000480943 MAP1LC3CQ9BXW4 147 aa3.55□□□□□ -1.84
VPS50-215ENST00000480943 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
VPS50-215ENST00000480943 ETDCA0A1B0GVM5 59 aa3.54□□□□□ -1.84
VPS50-215ENST00000480943 LINC00587B1AMM8 73 aa3.54□□□□□ -1.84
VPS50-215ENST00000480943 J3QQQ9 107 aa3.54□□□□□ -1.84
VPS50-215ENST00000480943 IGKCP01834 107 aa3.54□□□□□ -1.84
VPS50-215ENST00000480943 LGALS3P17931 250 aaKnown RBP3.54□□□□□ -1.84
VPS50-215ENST00000480943 C3orf22Q8N5N4 141 aa3.54□□□□□ -1.84
VPS50-215ENST00000480943 RETNLBQ9BQ08 111 aa3.54□□□□□ -1.84
VPS50-215ENST00000480943 HSPB8Q9UJY1 196 aa3.54□□□□□ -1.84
VPS50-215ENST00000480943 NPC2P61916 151 aa3.53□□□□□ -1.84
VPS50-215ENST00000480943 SPRR4Q96PI1 79 aa3.53□□□□□ -1.84
VPS50-215ENST00000480943 KCNQ1DNQ9H478 68 aa3.53□□□□□ -1.84
VPS50-215ENST00000480943 ZNF706Q9Y5V0 76 aaPredicted RBP3.53□□□□□ -1.84
VPS50-215ENST00000480943 DDTP30046 118 aa3.52□□□□□ -1.85
VPS50-215ENST00000480943 SPRR1AP35321 89 aa3.52□□□□□ -1.85
VPS50-215ENST00000480943 NMUP48645 174 aa3.52□□□□□ -1.85
VPS50-215ENST00000480943 S100A12P80511 92 aa3.52□□□□□ -1.85
VPS50-215ENST00000480943 LINC00337Q8N6G1 96 aa3.52□□□□□ -1.85
VPS50-215ENST00000480943 SMCR5Q8TEV8 140 aa3.52□□□□□ -1.85
VPS50-215ENST00000480943 MIEN1Q9BRT3 115 aa3.52□□□□□ -1.85
VPS50-215ENST00000480943 PPDPFQ9H3Y8 114 aa3.52□□□□□ -1.85
VPS50-215ENST00000480943 KRTAP4-16G5E9R7 235 aaPredicted RBP3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST1H2BKO60814 126 aa3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST1H2BJP06899 126 aa3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST1H2BOP23527 126 aa3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST1H2BBP33778 126 aa3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST1H2BDP58876 126 aa3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST1H2BCP62807 126 aa3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST2H2BEQ16778 126 aa3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST1H2BHQ93079 126 aa3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST1H2BNQ99877 126 aa3.51□□□□□ -1.85
VPS50-215ENST00000480943 HIST1H2BMQ99879 126 aa3.51□□□□□ -1.85
VPS50-215ENST00000480943 SPANXB1Q9NS25 103 aaPredicted RBP3.51□□□□□ -1.85
VPS50-215ENST00000480943 LOC107984156A0A0G2JMH3 177 aa3.5□□□□□ -1.85
VPS50-215ENST00000480943 A0A0J9YXY3 114 aa3.5□□□□□ -1.85
VPS50-215ENST00000480943 TRBV10-2A0A0K0K1G8 114 aa3.5□□□□□ -1.85
VPS50-215ENST00000480943 E9PLD3 99 aa3.5□□□□□ -1.85
VPS50-215ENST00000480943 SYS1-DBNDD2H3BUS1 97 aa3.5□□□□□ -1.85
VPS50-215ENST00000480943 S100A7L2Q5SY68 101 aa3.5□□□□□ -1.85
VPS50-215ENST00000480943 SOSTDC1Q6X4U4 206 aa3.5□□□□□ -1.85
VPS50-215ENST00000480943 ARL17AQ8IVW1 177 aa3.5□□□□□ -1.85
VPS50-215ENST00000480943 Q8N377 158 aa3.5□□□□□ -1.85
VPS50-215ENST00000480943 TRAV23DV6A0A075B6W5 121 aa3.49□□□□□ -1.85
VPS50-215ENST00000480943 ERC2-IT1O76042 136 aa3.49□□□□□ -1.85
VPS50-215ENST00000480943 NDUFC2O95298 119 aa3.49□□□□□ -1.85
VPS50-215ENST00000480943 Q8NBF4 154 aa3.49□□□□□ -1.85
VPS50-215ENST00000480943 C5orf52A6NGY3 159 aa3.48□□□□□ -1.85
VPS50-215ENST00000480943 IGLV6-57P01721 117 aa3.48□□□□□ -1.85
VPS50-215ENST00000480943 LINC01545Q5VT33 79 aa3.48□□□□□ -1.85
VPS50-215ENST00000480943 SPAG11AQ6PDA7 123 aa3.48□□□□□ -1.85
VPS50-215ENST00000480943 Q6ZRX8 168 aa3.48□□□□□ -1.85
VPS50-215ENST00000480943 Q9BRP9 147 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms