RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 BTAF1O14981 1849 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 SIPA1L3O60292 1781 aaPredicted RBP0.14□□□□□ -2.39
CALD1-219ENST00000480638 ATG2AQ2TAZ0 1938 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 MYH13Q9UKX3 1938 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 TRAV13-2A0A0B4J235 113 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 EFCAB10A6NFE3 127 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 TMEM14DPA8MWL7 114 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 LINC00587B1AMM8 73 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 APOC4-APOC2K7ER74 178 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 DLEU1O43261 78 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 SIX6O95475 246 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 NMBP08949 121 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 BTG2P78543 158 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 SARNPP82979 210 aaKnown RBP0.13□□□□□ -2.39
CALD1-219ENST00000480638 C1orf54Q8WWF1 131 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 PRR15LQ9BU68 103 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 SCN3BQ9NY72 215 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 AKAP12Q02952 1782 aa0.13□□□□□ -2.39
CALD1-219ENST00000480638 TRAV1-2A0A0B4J238 106 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 OOSP1A8MZH6 123 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 MIF4GDA9UHW6 222 aaKnown RBP0.12□□□□□ -2.39
CALD1-219ENST00000480638 AKAIN1P0CW23 69 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 FGF7P21781 194 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 CCL18P55774 89 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 MT1HP80294 61 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 CATR1Q13166 79 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 Q56UQ5 140 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 TSLPQ969D9 159 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 NAA60Q9H7X0 242 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 LINC00474Q9P2X8 69 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 MYH6P13533 1939 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 ZNF236Q9UL36 1845 aa0.12□□□□□ -2.39
CALD1-219ENST00000480638 CPSF1Q10570 1443 aaKnown RBP0.12□□□□□ -2.39
CALD1-219ENST00000480638 PPP1R17O96001 155 aa0.11□□□□□ -2.39
CALD1-219ENST00000480638 GCHFRP30047 84 aa0.11□□□□□ -2.39
CALD1-219ENST00000480638 C10orf128Q5T292 105 aa0.11□□□□□ -2.39
CALD1-219ENST00000480638 Q5VV11 94 aa0.11□□□□□ -2.39
CALD1-219ENST00000480638 C12orf73Q69YU5 71 aa0.11□□□□□ -2.39
CALD1-219ENST00000480638 SPINK6Q6UWN8 80 aa0.11□□□□□ -2.39
CALD1-219ENST00000480638 TTC9CQ8N5M4 171 aa0.11□□□□□ -2.39
CALD1-219ENST00000480638 COPS9Q8WXC6 57 aa0.11□□□□□ -2.39
CALD1-219ENST00000480638 PP6455Q8WZ26 134 aa0.11□□□□□ -2.39
CALD1-219ENST00000480638 C2orf88Q9BSF0 95 aa0.11□□□□□ -2.39
CALD1-219ENST00000480638 FOCADQ5VW36 1801 aa0.1□□□□□ -2.39
CALD1-219ENST00000480638 PATJQ8NI35 1801 aa0.1□□□□□ -2.39
CALD1-219ENST00000480638 C4BP0C0L5 1744 aa0.1□□□□□ -2.39
CALD1-219ENST00000480638 M0R135 149 aa0.1□□□□□ -2.39
CALD1-219ENST00000480638 CFAP126Q5VTH2 177 aa0.1□□□□□ -2.39
CALD1-219ENST00000480638 SSBP3-AS1Q7Z2R9 100 aa0.1□□□□□ -2.39
CALD1-219ENST00000480638 C5orf38Q86SI9 138 aa0.1□□□□□ -2.39
CALD1-219ENST00000480638 BAGE3Q86Y29 109 aa0.1□□□□□ -2.39
CALD1-219ENST00000480638 SPANXDQ9BXN6 97 aa0.1□□□□□ -2.39
CALD1-219ENST00000480638 CCDC141Q6ZP82 1450 aa0.1□□□□□ -2.39
CALD1-219ENST00000480638 TRBV7-3A0A075B6L6 115 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 ZNF815PA8K554 130 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 CORTO00230 105 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 SNAPC5O75971 98 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 APOC2P02655 101 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 COX6A2Q02221 97 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 SPAG11BQ08648 103 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 C9orf153Q5TBE3 101 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 MRPL54Q6P161 138 aaKnown RBP0.09□□□□□ -2.4
CALD1-219ENST00000480638 SPAG11AQ6PDA7 123 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 PPP3R2Q96LZ3 170 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 AQP10Q96PS8 301 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 AMELXQ99217 191 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 LINC00472Q9H8W2 130 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 NDUFA4L2Q9NRX3 87 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 SCP2D1Q9UJQ7 156 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 LENEPQ9Y5L5 61 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 CRYBG1Q9Y4K1 1723 aa0.09□□□□□ -2.4
CALD1-219ENST00000480638 DOCK2Q92608 1830 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 NAIPQ13075 1403 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 F6UZH7 168 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 TNFP01375 233 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 MT1HL1P0DM35 61 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 TPPP2P59282 170 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 COMMD6Q7Z4G1 85 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 KRTAP8-1Q8IUC2 63 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 UBE2DNLQ8IWF7 75 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 C8orf59Q8N0T1 100 aaPredicted RBP0.08□□□□□ -2.4
CALD1-219ENST00000480638 CYP4F30PQ9H0H9 118 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 DPH3P1Q9H4G8 78 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 R4GMQ9 66 aa0.08□□□□□ -2.4
CALD1-219ENST00000480638 DOCK11Q5JSL3 2073 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 A0A1B0GUL6 1792 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 CTXND1A0A1B0GTU2 59 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 IGLC7A0M8Q6 106 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 C10orf142B7Z368 130 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 HMGN4O00479 90 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 SSSCA1O60232 199 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 IFNGP01579 166 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 S100A1P23297 94 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 FAM213BQ8TBF2 198 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 MGST2Q99735 147 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 NPVFQ9HCQ7 196 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 DYNLRB1Q9NP97 96 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 GNG8Q9UK08 70 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 IER3IP1Q9Y5U9 82 aa0.07□□□□□ -2.4
CALD1-219ENST00000480638 V9GYH0 126 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms