RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 LINC00315P59091 139 aa6.51□□□□□ -1.37
VEGFA-212ENST00000480614 IGSF10Q6WRI0 2623 aa6.5□□□□□ -1.37
VEGFA-212ENST00000480614 IGLV6-57P01721 117 aa6.5□□□□□ -1.37
VEGFA-212ENST00000480614 FAM218AQ96MZ4 157 aa6.5□□□□□ -1.37
VEGFA-212ENST00000480614 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
VEGFA-212ENST00000480614 NSD1Q96L73 2696 aaPredicted RBP6.49□□□□□ -1.37
VEGFA-212ENST00000480614 UQCR11O14957 56 aa6.49□□□□□ -1.37
VEGFA-212ENST00000480614 ST20-AS1Q8NBB2 130 aa6.49□□□□□ -1.37
VEGFA-212ENST00000480614 Q96NJ1 140 aa6.49□□□□□ -1.37
VEGFA-212ENST00000480614 KLKP1Q107X0 134 aa6.48□□□□□ -1.37
VEGFA-212ENST00000480614 RPL37AP61513 92 aaKnown RBP6.48□□□□□ -1.37
VEGFA-212ENST00000480614 TM2D3Q9BRN9 247 aa6.48□□□□□ -1.37
VEGFA-212ENST00000480614 PHF5AQ7RTV0 110 aaKnown RBP6.48□□□□□ -1.37
VEGFA-212ENST00000480614 LINC01600Q96MT4 127 aa6.47□□□□□ -1.37
VEGFA-212ENST00000480614 Q8NAQ8 132 aa6.47□□□□□ -1.37
VEGFA-212ENST00000480614 WIPF1O43516 503 aa6.46□□□□□ -1.37
VEGFA-212ENST00000480614 IGLV8-61A0A075B6I0 122 aa6.46□□□□□ -1.38
VEGFA-212ENST00000480614 CHTF8P0CG12 524 aa6.46□□□□□ -1.38
VEGFA-212ENST00000480614 LINC00588Q9Y4M8 146 aa6.46□□□□□ -1.38
VEGFA-212ENST00000480614 MRPL34Q9BQ48 92 aaKnown RBP6.45□□□□□ -1.38
VEGFA-212ENST00000480614 COX6B2Q6YFQ2 88 aa6.44□□□□□ -1.38
VEGFA-212ENST00000480614 SSBP3-AS1Q7Z2R9 100 aa6.44□□□□□ -1.38
VEGFA-212ENST00000480614 J3QL48 77 aa6.44□□□□□ -1.38
VEGFA-212ENST00000480614 COA5Q86WW8 74 aa6.44□□□□□ -1.38
VEGFA-212ENST00000480614 APCP25054 2843 aa6.44□□□□□ -1.38
VEGFA-212ENST00000480614 WWC2-AS2Q96NR7 200 aa6.44□□□□□ -1.38
VEGFA-212ENST00000480614 KCNQ1DNQ9H478 68 aa6.44□□□□□ -1.38
VEGFA-212ENST00000480614 KTN1-AS1Q86SY8 53 aa6.43□□□□□ -1.38
VEGFA-212ENST00000480614 LINC00304Q8N9R0 145 aa6.43□□□□□ -1.38
VEGFA-212ENST00000480614 KLK9Q2XQG4 91 aa6.41□□□□□ -1.38
VEGFA-212ENST00000480614 NBEAL2Q6ZNJ1 2754 aa6.4□□□□□ -1.38
VEGFA-212ENST00000480614 UBR5O95071 2799 aaPredicted RBP6.4□□□□□ -1.38
VEGFA-212ENST00000480614 PRR15Q8IV56 129 aa6.4□□□□□ -1.38
VEGFA-212ENST00000480614 MIR22HGQ0VDD5 57 aa6.39□□□□□ -1.39
VEGFA-212ENST00000480614 A0A1B0GVX0 72 aa6.39□□□□□ -1.39
VEGFA-212ENST00000480614 K7EQZ3 153 aa6.38□□□□□ -1.39
VEGFA-212ENST00000480614 LINC00528Q8N1L1 170 aa6.37□□□□□ -1.39
VEGFA-212ENST00000480614 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
VEGFA-212ENST00000480614 LINC00336Q6ZUF6 198 aa6.37□□□□□ -1.39
VEGFA-212ENST00000480614 LITAFQ99732 161 aa6.37□□□□□ -1.39
VEGFA-212ENST00000480614 PLA2G2DQ9UNK4 145 aa6.37□□□□□ -1.39
VEGFA-212ENST00000480614 IGLV1-50A0A075B6I6 118 aa6.36□□□□□ -1.39
VEGFA-212ENST00000480614 FAM168BA1KXE4 195 aa6.36□□□□□ -1.39
VEGFA-212ENST00000480614 ZNF861PO60384 105 aa6.36□□□□□ -1.39
VEGFA-212ENST00000480614 H7BZZ5 65 aa6.36□□□□□ -1.39
VEGFA-212ENST00000480614 A0A0C4DFX4 3053 aa6.36□□□□□ -1.39
VEGFA-212ENST00000480614 RBM12B-AS1Q9P1G2 102 aa6.35□□□□□ -1.39
VEGFA-212ENST00000480614 APLNQ9ULZ1 77 aa6.35□□□□□ -1.39
VEGFA-212ENST00000480614 FLNCQ14315 2725 aa6.35□□□□□ -1.39
VEGFA-212ENST00000480614 CEP350Q5VT06 3117 aa6.35□□□□□ -1.39
VEGFA-212ENST00000480614 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
VEGFA-212ENST00000480614 LCA10Q71F78 164 aa6.34□□□□□ -1.39
VEGFA-212ENST00000480614 IGFL1Q6UW32 110 aa6.34□□□□□ -1.39
VEGFA-212ENST00000480614 KRTAP24-1Q3LI83 254 aa6.34□□□□□ -1.39
VEGFA-212ENST00000480614 DNAH12Q6ZR08 3092 aa6.34□□□□□ -1.4
VEGFA-212ENST00000480614 EP400Q96L91 3159 aa6.33□□□□□ -1.4
VEGFA-212ENST00000480614 TLX1NBP0CAT3 122 aa6.32□□□□□ -1.4
VEGFA-212ENST00000480614 OBSCN-AS1Q96MR7 158 aa6.32□□□□□ -1.4
VEGFA-212ENST00000480614 PRR34Q9NV39 138 aa6.32□□□□□ -1.4
VEGFA-212ENST00000480614 CSNK1G2-AS1Q8NCQ2 148 aa6.32□□□□□ -1.4
VEGFA-212ENST00000480614 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
VEGFA-212ENST00000480614 DSCR10P59022 87 aa6.3□□□□□ -1.4
VEGFA-212ENST00000480614 A8MUN3 132 aa6.3□□□□□ -1.4
VEGFA-212ENST00000480614 C15orf56Q8N910 161 aa6.3□□□□□ -1.4
VEGFA-212ENST00000480614 LUZP6Q538Z0 58 aa6.3□□□□□ -1.4
VEGFA-212ENST00000480614 ITPR1Q14643 2758 aa6.29□□□□□ -1.4
VEGFA-212ENST00000480614 TRANK1O15050 2925 aa6.29□□□□□ -1.4
VEGFA-212ENST00000480614 Q1T7F1 81 aa6.28□□□□□ -1.4
VEGFA-212ENST00000480614 C9orf129Q5T035 196 aaKnown RBP6.28□□□□□ -1.4
VEGFA-212ENST00000480614 DSPP15924 2871 aaKnown RBP6.27□□□□□ -1.41
VEGFA-212ENST00000480614 CNBPP62633 177 aaKnown RBP6.27□□□□□ -1.41
VEGFA-212ENST00000480614 IGLV5-37A0A075B6J1 123 aa6.26□□□□□ -1.41
VEGFA-212ENST00000480614 FAM104AQ969W3 186 aa6.25□□□□□ -1.41
VEGFA-212ENST00000480614 C19orf73Q9NVV2 129 aa6.25□□□□□ -1.41
VEGFA-212ENST00000480614 A0A087WTM6 91 aa6.25□□□□□ -1.41
VEGFA-212ENST00000480614 K7EIL1 84 aa6.24□□□□□ -1.41
VEGFA-212ENST00000480614 Q8N377 158 aa6.24□□□□□ -1.41
VEGFA-212ENST00000480614 IGLV7-43P04211 117 aa6.24□□□□□ -1.41
VEGFA-212ENST00000480614 C9orf163Q8N9P6 203 aa6.24□□□□□ -1.41
VEGFA-212ENST00000480614 LINC00612Q8N6U2 182 aa6.24□□□□□ -1.41
VEGFA-212ENST00000480614 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
VEGFA-212ENST00000480614 C9orf92A6NGG3 77 aa6.23□□□□□ -1.41
VEGFA-212ENST00000480614 LINC00483Q53H64 154 aa6.21□□□□□ -1.41
VEGFA-212ENST00000480614 KRTAP10-11P60412 298 aa6.19□□□□□ -1.42
VEGFA-212ENST00000480614 PSORS1C2Q9UIG4 136 aa6.19□□□□□ -1.42
VEGFA-212ENST00000480614 IGLV5-48A0A075B6I7 105 aa6.17□□□□□ -1.42
VEGFA-212ENST00000480614 HIVEP1P15822 2718 aa6.17□□□□□ -1.42
VEGFA-212ENST00000480614 LINC01554Q52M75 96 aa6.17□□□□□ -1.42
VEGFA-212ENST00000480614 ZNF575Q86XF7 245 aa6.16□□□□□ -1.42
VEGFA-212ENST00000480614 A0A0D9SG42 100 aa6.16□□□□□ -1.42
VEGFA-212ENST00000480614 CHD9Q3L8U1 2897 aa6.16□□□□□ -1.42
VEGFA-212ENST00000480614 Q75L30 129 aa6.16□□□□□ -1.42
VEGFA-212ENST00000480614 GIG44P09565 113 aaPredicted RBP6.15□□□□□ -1.42
VEGFA-212ENST00000480614 FAM229BQ4G0N7 80 aa6.15□□□□□ -1.43
VEGFA-212ENST00000480614 SRCAPQ6ZRS2 3230 aa6.14□□□□□ -1.43
VEGFA-212ENST00000480614 OCR1Q9BZK8 76 aa6.13□□□□□ -1.43
VEGFA-212ENST00000480614 NF1P21359 2839 aa6.12□□□□□ -1.43
VEGFA-212ENST00000480614 Q6ZSA8 131 aa6.12□□□□□ -1.43
VEGFA-212ENST00000480614 Q8N1X5 172 aa6.12□□□□□ -1.43
VEGFA-212ENST00000480614 CFAP54Q96N23 3096 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 161.2 ms