RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 CBY1Q9Y3M2 126 aa6.91□□□□□ -1.3
CLDN11-205ENST00000480067 TMEM238LA0A1B0GVL6 79 aa6.9□□□□□ -1.31
CLDN11-205ENST00000480067 LORP23490 312 aaPredicted RBP6.9□□□□□ -1.31
CLDN11-205ENST00000480067 TRAV23DV6A0A075B6W5 121 aa6.89□□□□□ -1.31
CLDN11-205ENST00000480067 PRYO14603 147 aa6.89□□□□□ -1.31
CLDN11-205ENST00000480067 BCE1O60756 84 aa6.89□□□□□ -1.31
CLDN11-205ENST00000480067 IGLV7-43P04211 117 aa6.88□□□□□ -1.31
CLDN11-205ENST00000480067 CFC1BP0CG36 223 aa6.87□□□□□ -1.31
CLDN11-205ENST00000480067 CFC1P0CG37 223 aa6.87□□□□□ -1.31
CLDN11-205ENST00000480067 FXYD2P54710 66 aa6.87□□□□□ -1.31
CLDN11-205ENST00000480067 KRTAP10-4P60372 401 aaPredicted RBP6.87□□□□□ -1.31
CLDN11-205ENST00000480067 CTAG1AP78358 180 aa6.87□□□□□ -1.31
CLDN11-205ENST00000480067 RAB37Q96AX2 223 aa6.87□□□□□ -1.31
CLDN11-205ENST00000480067 ZNF73O43830 326 aaPredicted RBP6.86□□□□□ -1.31
CLDN11-205ENST00000480067 UBE2AP49459 152 aa6.86□□□□□ -1.31
CLDN11-205ENST00000480067 HINT1P49773 126 aaPredicted RBP6.86□□□□□ -1.31
CLDN11-205ENST00000480067 FAM19A1Q7Z5A9 133 aa6.86□□□□□ -1.31
CLDN11-205ENST00000480067 ETDCA0A1B0GVM5 59 aa6.86□□□□□ -1.31
CLDN11-205ENST00000480067 RPL28P46779 137 aaKnown RBP6.86□□□□□ -1.31
CLDN11-205ENST00000480067 A0A0B4J2C4 111 aa6.85□□□□□ -1.31
CLDN11-205ENST00000480067 ZNF861PO60384 105 aa6.85□□□□□ -1.31
CLDN11-205ENST00000480067 SPRR1AP35321 89 aa6.85□□□□□ -1.31
CLDN11-205ENST00000480067 M0R143 59 aa6.84□□□□□ -1.31
CLDN11-205ENST00000480067 RPL13AP40429 203 aaKnown RBP6.84□□□□□ -1.31
CLDN11-205ENST00000480067 BVES-AS1Q5T3Y7 98 aa6.84□□□□□ -1.31
CLDN11-205ENST00000480067 DIRC1Q969H9 104 aa6.84□□□□□ -1.31
CLDN11-205ENST00000480067 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
CLDN11-205ENST00000480067 NHP2Q9NX24 153 aaKnown RBP6.84□□□□□ -1.31
CLDN11-205ENST00000480067 KRTAP4-16G5E9R7 235 aaPredicted RBP6.83□□□□□ -1.32
CLDN11-205ENST00000480067 H7C2G1 150 aa6.83□□□□□ -1.32
CLDN11-205ENST00000480067 PRLHP81277 87 aa6.83□□□□□ -1.32
CLDN11-205ENST00000480067 C6orf99Q4VX62 202 aa6.83□□□□□ -1.32
CLDN11-205ENST00000480067 SPINK6Q6UWN8 80 aa6.83□□□□□ -1.32
CLDN11-205ENST00000480067 SMIM11BQ8TCY0 68 aa6.83□□□□□ -1.32
CLDN11-205ENST00000480067 PRO1854Q9UHT4 67 aa6.83□□□□□ -1.32
CLDN11-205ENST00000480067 B5MCH6 92 aa6.82□□□□□ -1.32
CLDN11-205ENST00000480067 H0Y9J4 135 aa6.82□□□□□ -1.32
CLDN11-205ENST00000480067 INAFM2P0DMQ5 153 aa6.82□□□□□ -1.32
CLDN11-205ENST00000480067 KRTAP13-1Q8IUC0 172 aa6.82□□□□□ -1.32
CLDN11-205ENST00000480067 VAMP3Q15836 100 aa6.81□□□□□ -1.32
CLDN11-205ENST00000480067 Q1RN00 199 aa6.81□□□□□ -1.32
CLDN11-205ENST00000480067 Q6ZRX8 168 aa6.81□□□□□ -1.32
CLDN11-205ENST00000480067 HIGD2AQ9BW72 106 aa6.81□□□□□ -1.32
CLDN11-205ENST00000480067 TRBV7-6A0A0J9YX20 115 aa6.8□□□□□ -1.32
CLDN11-205ENST00000480067 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
CLDN11-205ENST00000480067 A0A1B0GWB2 263 aa6.8□□□□□ -1.32
CLDN11-205ENST00000480067 K7ERJ3 54 aa6.8□□□□□ -1.32
CLDN11-205ENST00000480067 COX7BP24311 80 aa6.8□□□□□ -1.32
CLDN11-205ENST00000480067 KRTAP4-6Q9BYQ5 205 aa6.8□□□□□ -1.32
CLDN11-205ENST00000480067 ABCA13Q86UQ4 5058 aa6.79□□□□□ -1.32
CLDN11-205ENST00000480067 ELOF1P60002 83 aaKnown RBP6.78□□□□□ -1.32
CLDN11-205ENST00000480067 BATFQ16520 125 aa6.78□□□□□ -1.32
CLDN11-205ENST00000480067 SMCR5Q8TEV8 140 aa6.77□□□□□ -1.33
CLDN11-205ENST00000480067 Q9BRP9 147 aa6.77□□□□□ -1.33
CLDN11-205ENST00000480067 DHRS4-AS1Q9P1J3 65 aa6.77□□□□□ -1.33
CLDN11-205ENST00000480067 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
CLDN11-205ENST00000480067 PCP4L1A6NKN8 68 aa6.76□□□□□ -1.33
CLDN11-205ENST00000480067 PSMB2P49721 201 aa6.75□□□□□ -1.33
CLDN11-205ENST00000480067 FLG2Q5D862 2391 aaPredicted RBP6.74□□□□□ -1.33
CLDN11-205ENST00000480067 SLC25A20O43772 301 aa6.74□□□□□ -1.33
CLDN11-205ENST00000480067 H0YGX0 51 aa6.74□□□□□ -1.33
CLDN11-205ENST00000480067 ERC2-IT1O76042 136 aa6.74□□□□□ -1.33
CLDN11-205ENST00000480067 TSPAN13O95857 204 aa6.74□□□□□ -1.33
CLDN11-205ENST00000480067 ZNF706Q9Y5V0 76 aaPredicted RBP6.74□□□□□ -1.33
CLDN11-205ENST00000480067 TRIAP1O43715 76 aa6.73□□□□□ -1.33
CLDN11-205ENST00000480067 COX6CP09669 75 aa6.73□□□□□ -1.33
CLDN11-205ENST00000480067 LINC00575Q6W349 94 aa6.73□□□□□ -1.33
CLDN11-205ENST00000480067 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
CLDN11-205ENST00000480067 SNCGO76070 127 aa6.72□□□□□ -1.33
CLDN11-205ENST00000480067 PKHD1L1Q86WI1 4243 aa6.71□□□□□ -1.33
CLDN11-205ENST00000480067 hADV29S1A0JD25 119 aa6.71□□□□□ -1.34
CLDN11-205ENST00000480067 PCLOQ9Y6V0 5065 aa6.71□□□□□ -1.34
CLDN11-205ENST00000480067 SCGB1C2P0DMR2 95 aa6.7□□□□□ -1.34
CLDN11-205ENST00000480067 GAGE2AQ6NT46 116 aa6.7□□□□□ -1.34
CLDN11-205ENST00000480067 ST20-AS1Q8NBB2 130 aa6.7□□□□□ -1.34
CLDN11-205ENST00000480067 SPRR4Q96PI1 79 aa6.7□□□□□ -1.34
CLDN11-205ENST00000480067 KRTAP1-4P0C5Y4 121 aa6.69□□□□□ -1.34
CLDN11-205ENST00000480067 LINC01600Q96MT4 127 aa6.69□□□□□ -1.34
CLDN11-205ENST00000480067 SNHG12Q9BXW3 62 aa6.69□□□□□ -1.34
CLDN11-205ENST00000480067 ANAPC11Q9NYG5 84 aa6.69□□□□□ -1.34
CLDN11-205ENST00000480067 OXTP01178 125 aa6.69□□□□□ -1.34
CLDN11-205ENST00000480067 DEFB105AQ8NG35 78 aa6.69□□□□□ -1.34
CLDN11-205ENST00000480067 FAT3Q8TDW7 4589 aa6.68□□□□□ -1.34
CLDN11-205ENST00000480067 CRYGAP11844 174 aa6.67□□□□□ -1.34
CLDN11-205ENST00000480067 FAM229BQ4G0N7 80 aa6.67□□□□□ -1.34
CLDN11-205ENST00000480067 FAM218AQ96MZ4 157 aa6.67□□□□□ -1.34
CLDN11-205ENST00000480067 NAA38Q9BRA0 125 aaKnown RBP6.67□□□□□ -1.34
CLDN11-205ENST00000480067 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
CLDN11-205ENST00000480067 LINC00483Q53H64 154 aa6.66□□□□□ -1.34
CLDN11-205ENST00000480067 COL5A1-AS1Q5SY13 56 aa6.66□□□□□ -1.34
CLDN11-205ENST00000480067 Q6ZQY7 126 aa6.66□□□□□ -1.34
CLDN11-205ENST00000480067 PRR26Q8N8Z3 221 aa6.66□□□□□ -1.34
CLDN11-205ENST00000480067 CLEC2BQ92478 149 aa6.66□□□□□ -1.34
CLDN11-205ENST00000480067 TEX49A0A1B0GTD5 131 aa6.65□□□□□ -1.34
CLDN11-205ENST00000480067 A0A1B0GX51 115 aa6.65□□□□□ -1.34
CLDN11-205ENST00000480067 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.65□□□□□ -1.34
CLDN11-205ENST00000480067 A0A087X002 238 aa6.65□□□□□ -1.35
CLDN11-205ENST00000480067 C9orf118A6NHY6 69 aa6.65□□□□□ -1.35
CLDN11-205ENST00000480067 H3BUT2 72 aa6.65□□□□□ -1.35
CLDN11-205ENST00000480067 TAX1BP3O14907 124 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms