RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 IGLV4-69A0A075B6H9 119 aa4.15□□□□□ -1.75
SF3B1-209ENST00000479532 OXTP01178 125 aa4.15□□□□□ -1.75
SF3B1-209ENST00000479532 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
SF3B1-209ENST00000479532 C2orf66Q6UXQ4 117 aa4.15□□□□□ -1.75
SF3B1-209ENST00000479532 LINC00336Q6ZUF6 198 aa4.15□□□□□ -1.75
SF3B1-209ENST00000479532 C20orf203Q8NBC4 194 aa4.15□□□□□ -1.75
SF3B1-209ENST00000479532 Q9HAA7 133 aa4.15□□□□□ -1.75
SF3B1-209ENST00000479532 IGIPA6NJ69 53 aa4.14□□□□□ -1.75
SF3B1-209ENST00000479532 KLKP1Q107X0 134 aa4.14□□□□□ -1.75
SF3B1-209ENST00000479532 MIAQ16674 131 aa4.14□□□□□ -1.75
SF3B1-209ENST00000479532 Q1RN00 199 aa4.14□□□□□ -1.75
SF3B1-209ENST00000479532 LINC00269Q8N2A0 174 aa4.14□□□□□ -1.75
SF3B1-209ENST00000479532 UBE2D4Q9Y2X8 147 aa4.14□□□□□ -1.75
SF3B1-209ENST00000479532 IGLV4-60A0A075B6I1 120 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 IGKV2D-24A0A075B6R9 120 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 IGKV3OR2-268A0A0C4DH90 116 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 TRBV7-6A0A0J9YX20 115 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 COX7A2LO14548 114 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 CD164Q04900 197 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 REG3AQ06141 175 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 SS18Q15532 418 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 CLPSL2Q6UWE3 100 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 Q6ZRU5 148 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 SMCR5Q8TEV8 140 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 OBSCN-AS1Q96MR7 158 aa4.13□□□□□ -1.75
SF3B1-209ENST00000479532 RPL39P62891 51 aaKnown RBP4.12□□□□□ -1.75
SF3B1-209ENST00000479532 ENHOQ6UWT2 76 aa4.12□□□□□ -1.75
SF3B1-209ENST00000479532 PRR15Q8IV56 129 aa4.12□□□□□ -1.75
SF3B1-209ENST00000479532 DSCR8Q96T75 97 aa4.12□□□□□ -1.75
SF3B1-209ENST00000479532 CDC42SE2Q9NRR3 84 aa4.12□□□□□ -1.75
SF3B1-209ENST00000479532 PRR34Q9NV39 138 aa4.12□□□□□ -1.75
SF3B1-209ENST00000479532 DNAH6Q9C0G6 4158 aa4.12□□□□□ -1.75
SF3B1-209ENST00000479532 MUSTN1Q8IVN3 82 aa4.11□□□□□ -1.75
SF3B1-209ENST00000479532 LITAFQ99732 161 aa4.11□□□□□ -1.75
SF3B1-209ENST00000479532 DNAH1Q9P2D7 4330 aa4.11□□□□□ -1.75
SF3B1-209ENST00000479532 VPS13DQ5THJ4 4388 aa4.11□□□□□ -1.75
SF3B1-209ENST00000479532 KMT2CQ8NEZ4 4911 aaKnown RBP4.1□□□□□ -1.75
SF3B1-209ENST00000479532 IGLV10-54A0A075B6I4 117 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 IGLV4-3A0A075B6K6 122 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 TRAV7A0A075B6U4 112 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 IGLV5-45A0A087WSX0 123 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 ERC2-IT1O76042 136 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 DNAL4O96015 105 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 C14orf177Q52M58 125 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 SFTA2Q6UW10 78 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 RYR2Q92736 4967 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 KMT2AQ03164 3969 aa4.1□□□□□ -1.75
SF3B1-209ENST00000479532 HYDINQ4G0P3 5121 aa4.09□□□□□ -1.75
SF3B1-209ENST00000479532 SACSQ9NZJ4 4579 aa4.09□□□□□ -1.75
SF3B1-209ENST00000479532 A0A0U1RQV1 116 aa4.09□□□□□ -1.75
SF3B1-209ENST00000479532 H7BZZ5 65 aa4.09□□□□□ -1.75
SF3B1-209ENST00000479532 RTL8CO15255 209 aa4.09□□□□□ -1.75
SF3B1-209ENST00000479532 XCL1P47992 114 aa4.09□□□□□ -1.75
SF3B1-209ENST00000479532 TSPEAR-AS2P59090 65 aa4.09□□□□□ -1.75
SF3B1-209ENST00000479532 RNASE13Q5GAN3 156 aaKnown RBP4.09□□□□□ -1.75
SF3B1-209ENST00000479532 Q6ZRN7 208 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-209ENST00000479532 FAM19A1Q7Z5A9 133 aa4.09□□□□□ -1.75
SF3B1-209ENST00000479532 CHCHD10Q8WYQ3 142 aaPredicted RBP4.09□□□□□ -1.75
SF3B1-209ENST00000479532 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
SF3B1-209ENST00000479532 CD164L2Q6UWJ8 174 aa4.08□□□□□ -1.76
SF3B1-209ENST00000479532 OPRPNQ99935 248 aaPredicted RBP4.08□□□□□ -1.76
SF3B1-209ENST00000479532 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
SF3B1-209ENST00000479532 A0A087WTM6 91 aa4.07□□□□□ -1.76
SF3B1-209ENST00000479532 IGHV1-58A0A0C4DH39 117 aa4.07□□□□□ -1.76
SF3B1-209ENST00000479532 CIRBPQ14011 172 aaKnown RBP4.07□□□□□ -1.76
SF3B1-209ENST00000479532 LINC01561Q8N1V8 128 aa4.07□□□□□ -1.76
SF3B1-209ENST00000479532 CYSTM1Q9H1C7 97 aa4.07□□□□□ -1.76
SF3B1-209ENST00000479532 TRAV13-2A0A0B4J235 113 aa4.06□□□□□ -1.76
SF3B1-209ENST00000479532 H0YGX0 51 aa4.06□□□□□ -1.76
SF3B1-209ENST00000479532 LECT2O14960 151 aa4.06□□□□□ -1.76
SF3B1-209ENST00000479532 BAALC-AS2P0C853 105 aa4.06□□□□□ -1.76
SF3B1-209ENST00000479532 FP248Q71RG6 208 aaPredicted RBP4.06□□□□□ -1.76
SF3B1-209ENST00000479532 Q8N814 137 aa4.06□□□□□ -1.76
SF3B1-209ENST00000479532 PKIGQ9Y2B9 76 aa4.06□□□□□ -1.76
SF3B1-209ENST00000479532 A0A0U1RRA0 63 aa4.05□□□□□ -1.76
SF3B1-209ENST00000479532 LRCOL1A6NCL2 159 aa4.05□□□□□ -1.76
SF3B1-209ENST00000479532 JMJD7-PLA2G4BH0Y9G9 81 aa4.05□□□□□ -1.76
SF3B1-209ENST00000479532 NDUFA1O15239 70 aa4.05□□□□□ -1.76
SF3B1-209ENST00000479532 CCKP06307 115 aa4.05□□□□□ -1.76
SF3B1-209ENST00000479532 RPL28P46779 137 aaKnown RBP4.05□□□□□ -1.76
SF3B1-209ENST00000479532 LINC00242Q5T6M2 205 aa4.05□□□□□ -1.76
SF3B1-209ENST00000479532 KRTAP26-1Q6PEX3 210 aa4.05□□□□□ -1.76
SF3B1-209ENST00000479532 FAM19A3Q7Z5A8 133 aa4.05□□□□□ -1.76
SF3B1-209ENST00000479532 RYR3Q15413 4870 aa4.05□□□□□ -1.76
SF3B1-209ENST00000479532 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.04□□□□□ -1.76
SF3B1-209ENST00000479532 IGKV2D-30A0A075B6S6 120 aa4.04□□□□□ -1.76
SF3B1-209ENST00000479532 H3BQ85 93 aa4.04□□□□□ -1.76
SF3B1-209ENST00000479532 CLEC2BQ92478 149 aa4.04□□□□□ -1.76
SF3B1-209ENST00000479532 FAM104AQ969W3 186 aa4.04□□□□□ -1.76
SF3B1-209ENST00000479532 FRAS1Q86XX4 4008 aa4.04□□□□□ -1.76
SF3B1-209ENST00000479532 A0A087WZ39 114 aa4.03□□□□□ -1.76
SF3B1-209ENST00000479532 GVQW2A0A096LPI5 108 aaPredicted RBP4.03□□□□□ -1.76
SF3B1-209ENST00000479532 IGHV3OR16-9A0A0B4J2B5 98 aa4.03□□□□□ -1.76
SF3B1-209ENST00000479532 A0A0J9YXV3 536 aa4.03□□□□□ -1.76
SF3B1-209ENST00000479532 C16orf90A8MZG2 172 aa4.03□□□□□ -1.76
SF3B1-209ENST00000479532 H7C2G1 150 aa4.03□□□□□ -1.76
SF3B1-209ENST00000479532 SPAG11BQ08648 103 aa4.03□□□□□ -1.76
SF3B1-209ENST00000479532 HIGD2BQ4VC39 106 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms