RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 DPM2O94777 84 aa3.68□□□□□ -1.82
GAPVD1-217ENST00000479511 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
GAPVD1-217ENST00000479511 ZNF56Q15929 161 aa3.68□□□□□ -1.82
GAPVD1-217ENST00000479511 Q9BRP9 147 aa3.68□□□□□ -1.82
GAPVD1-217ENST00000479511 HERC1Q15751 4861 aa3.68□□□□□ -1.82
GAPVD1-217ENST00000479511 ALMS1Q8TCU4 4167 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 TRBV27A0A0K0K1C4 114 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 I3L3M4 83 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 IGKCP01834 107 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 HTN1P15515 57 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 HINT1P49773 126 aaPredicted RBP3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 EMP1P54849 157 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 DEFB1P60022 68 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 RHOHQ15669 191 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 FAM74A4Q5TZK3 123 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 ATOH7Q8N100 152 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 DNAJC30Q96LL9 226 aa3.67□□□□□ -1.82
GAPVD1-217ENST00000479511 A0A087WX48 190 aa3.66□□□□□ -1.82
GAPVD1-217ENST00000479511 TRBV10-2A0A0K0K1G8 114 aa3.66□□□□□ -1.82
GAPVD1-217ENST00000479511 TAX1BP3O14907 124 aa3.66□□□□□ -1.82
GAPVD1-217ENST00000479511 DLEU1O43261 78 aa3.66□□□□□ -1.82
GAPVD1-217ENST00000479511 IGLV1-51P01701 117 aa3.66□□□□□ -1.82
GAPVD1-217ENST00000479511 COX8AP10176 69 aa3.66□□□□□ -1.82
GAPVD1-217ENST00000479511 PLEKHB2Q96CS7 222 aa3.66□□□□□ -1.82
GAPVD1-217ENST00000479511 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
GAPVD1-217ENST00000479511 F8VRH5 84 aa3.65□□□□□ -1.83
GAPVD1-217ENST00000479511 M0QY20 66 aa3.65□□□□□ -1.83
GAPVD1-217ENST00000479511 POLR2KP53803 58 aaKnown RBP3.65□□□□□ -1.83
GAPVD1-217ENST00000479511 SBSPONQ8IVN8 264 aa3.65□□□□□ -1.83
GAPVD1-217ENST00000479511 DNAH10Q8IVF4 4471 aa3.64□□□□□ -1.83
GAPVD1-217ENST00000479511 TRBV10-1A0A0K0K1A3 114 aa3.64□□□□□ -1.83
GAPVD1-217ENST00000479511 M0R378 163 aa3.64□□□□□ -1.83
GAPVD1-217ENST00000479511 KRTAP10-8P60410 259 aa3.64□□□□□ -1.83
GAPVD1-217ENST00000479511 SEC11AP67812 179 aa3.64□□□□□ -1.83
GAPVD1-217ENST00000479511 TMEM263Q8WUH6 116 aaKnown RBP3.64□□□□□ -1.83
GAPVD1-217ENST00000479511 RPL39LQ96EH5 51 aaKnown RBP3.64□□□□□ -1.83
GAPVD1-217ENST00000479511 SNHG12Q9BXW3 62 aa3.64□□□□□ -1.83
GAPVD1-217ENST00000479511 TRGV2A0A075B6R0 118 aa3.63□□□□□ -1.83
GAPVD1-217ENST00000479511 TRGV1A0A0A0MS02 117 aa3.63□□□□□ -1.83
GAPVD1-217ENST00000479511 CRYGAP11844 174 aa3.63□□□□□ -1.83
GAPVD1-217ENST00000479511 FXYD2P54710 66 aa3.63□□□□□ -1.83
GAPVD1-217ENST00000479511 CFAP126Q5VTH2 177 aa3.63□□□□□ -1.83
GAPVD1-217ENST00000479511 OR5A1Q8NGJ0 315 aa3.63□□□□□ -1.83
GAPVD1-217ENST00000479511 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
GAPVD1-217ENST00000479511 SPANXA1Q9NS26 97 aa3.63□□□□□ -1.83
GAPVD1-217ENST00000479511 MRPL35Q9NZE8 188 aaKnown RBP3.63□□□□□ -1.83
GAPVD1-217ENST00000479511 HIGD1BQ9P298 99 aa3.63□□□□□ -1.83
GAPVD1-217ENST00000479511 HSD52Q0P140 79 aa3.62□□□□□ -1.83
GAPVD1-217ENST00000479511 CST9LQ9H4G1 147 aa3.62□□□□□ -1.83
GAPVD1-217ENST00000479511 TRBV7-3A0A075B6L6 115 aa3.61□□□□□ -1.83
GAPVD1-217ENST00000479511 A0A0G2JQZ4 141 aa3.61□□□□□ -1.83
GAPVD1-217ENST00000479511 IGIPA6NJ69 53 aa3.61□□□□□ -1.83
GAPVD1-217ENST00000479511 LGALS3P17931 250 aaKnown RBP3.61□□□□□ -1.83
GAPVD1-217ENST00000479511 PRADC1Q9BSG0 188 aa3.61□□□□□ -1.83
GAPVD1-217ENST00000479511 TIMM21Q9BVV7 248 aa3.61□□□□□ -1.83
GAPVD1-217ENST00000479511 KMT2AQ03164 3969 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 TRGV4A0A0C4DH28 118 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 MYMXA0A1B0GTQ4 84 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 A0A1B0GV90 55 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 TRBV6-4A0A1B0GX49 114 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 H3BRM9 83 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 TMEM256-PLSCR3K7ERE1 68 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 TMEM258P61165 79 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 BVES-AS1Q5T3Y7 98 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 CARD19Q96LW7 228 aa3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 NOP10Q9NPE3 64 aaKnown RBP3.6□□□□□ -1.83
GAPVD1-217ENST00000479511 SMIM13P0DJ93 91 aa3.59□□□□□ -1.83
GAPVD1-217ENST00000479511 MRPS36P82909 103 aaKnown RBP3.59□□□□□ -1.83
GAPVD1-217ENST00000479511 TMEM170BQ5T4T1 132 aa3.59□□□□□ -1.83
GAPVD1-217ENST00000479511 GTF2H5Q6ZYL4 71 aa3.59□□□□□ -1.83
GAPVD1-217ENST00000479511 COPS9Q8WXC6 57 aa3.59□□□□□ -1.83
GAPVD1-217ENST00000479511 DMBT1Q9UGM3 2413 aaPredicted RBP3.58□□□□□ -1.84
GAPVD1-217ENST00000479511 TRBV25-1A0A075B6N4 114 aa3.58□□□□□ -1.84
GAPVD1-217ENST00000479511 NUPR2A6NF83 97 aa3.58□□□□□ -1.84
GAPVD1-217ENST00000479511 ZNF815PA8K554 130 aa3.58□□□□□ -1.84
GAPVD1-217ENST00000479511 ZNF25P17030 456 aaPredicted RBP3.58□□□□□ -1.84
GAPVD1-217ENST00000479511 RPL39P62891 51 aaKnown RBP3.58□□□□□ -1.84
GAPVD1-217ENST00000479511 Q6ZTI0 123 aa3.58□□□□□ -1.84
GAPVD1-217ENST00000479511 J3QQQ9 107 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 P0DMU3 169 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 FAM231AP0DMU4 169 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 FAM231CP0DMU5 169 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 MIFP14174 115 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 UBE2D3P61077 147 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 UBE2D2P62837 147 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 CIRBPQ14011 172 aaKnown RBP3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 Q6ZQT0 140 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 C10orf126Q8N4M7 172 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 AMELXQ99217 191 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 TMEM126AQ9H061 195 aa3.57□□□□□ -1.84
GAPVD1-217ENST00000479511 CCL25O15444 150 aa3.56□□□□□ -1.84
GAPVD1-217ENST00000479511 TCL1BO95988 128 aa3.56□□□□□ -1.84
GAPVD1-217ENST00000479511 DEFB130BP0DP73 79 aa3.56□□□□□ -1.84
GAPVD1-217ENST00000479511 DEFB130AP0DP74 79 aa3.56□□□□□ -1.84
GAPVD1-217ENST00000479511 FABP2P12104 132 aa3.56□□□□□ -1.84
GAPVD1-217ENST00000479511 FUSP35637 526 aaKnown RBP eCLIP3.56□□□□□ -1.84
GAPVD1-217ENST00000479511 UBE2BP63146 152 aa3.56□□□□□ -1.84
GAPVD1-217ENST00000479511 SFTA2Q6UW10 78 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms