RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 D6R8Y8 96 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 H3BQF6 201 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 HMGN2P05204 90 aaKnown RBP0.69□□□□□ -2.3
GARNL3-214ENST00000478696 CRYBG3Q68DQ2 2970 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 SPATA8Q6RVD6 105 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 MUSTN1Q8IVN3 82 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 FDCSPQ8NFU4 85 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 SPCS1Q9Y6A9 102 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 CEP295Q9C0D2 2601 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 LOC285556D6RIA3 1793 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 EEA1Q15075 1411 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 CEP162Q5TB80 1403 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 TCHHQ07283 1943 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 ITPR2Q14571 2701 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 MON2Q7Z3U7 1717 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 XRN1Q8IZH2 1706 aaKnown RBP0.69□□□□□ -2.3
GARNL3-214ENST00000478696 PTPRQQ9UMZ3 2332 aa0.69□□□□□ -2.3
GARNL3-214ENST00000478696 TGP01266 2768 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 JMJD1CQ15652 2540 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 A0A0D9SFI3 127 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 KANTRA0A1W2PQU2 76 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 LRRC37A2A6NM11 1700 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 ACYP1P07311 99 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 DMDP11532 3685 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 FLNAP21333 2647 aaKnown RBP0.68□□□□□ -2.3
GARNL3-214ENST00000478696 ARHGEF5Q12774 1597 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 WFDC2Q14508 124 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 ADIRFQ15847 76 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 LINC00643Q86TS7 51 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 WDFY3Q8IZQ1 3526 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 CCDC168Q8NDH2 2452 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 LINC01600Q96MT4 127 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 FAM103A1Q9BTL3 118 aaKnown RBP0.68□□□□□ -2.3
GARNL3-214ENST00000478696 ST20Q9HBF5 79 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 CELSR2Q9HCU4 2923 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 DMXL2Q8TDJ6 3036 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 ZFHX3Q15911 3703 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 ZNF236Q9UL36 1845 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 SLIT1O75093 1534 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 NEXMIFQ5QGS0 1516 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 DUOX2Q9NRD8 1548 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 UGGT2Q9NYU1 1516 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 NF1P21359 2839 aa0.68□□□□□ -2.3
GARNL3-214ENST00000478696 ANKHD1Q8IWZ3 2542 aaKnown RBP0.68□□□□□ -2.3
GARNL3-214ENST00000478696 SMG1Q96Q15 3661 aaKnown RBP0.68□□□□□ -2.3
GARNL3-214ENST00000478696 GOLGA4Q13439 2230 aaKnown RBP0.68□□□□□ -2.3
GARNL3-214ENST00000478696 COL14A1Q05707 1796 aaKnown RBP0.68□□□□□ -2.3
GARNL3-214ENST00000478696 C1orf167Q5SNV9 1468 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 NLRP1Q9C000 1473 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 LRBAP50851 2863 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 UBR3Q6ZT12 1888 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 CDC42BPAQ5VT25 1732 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 SAMD9Q5K651 1589 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 WNK3Q9BYP7 1800 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 H0Y9P7 68 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 SPINK7P58062 85 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 GNGT1P63211 74 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 DEFB107AQ8IZN7 70 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 NIPBLQ6KC79 2804 aaeCLIP0.67□□□□□ -2.3
GARNL3-214ENST00000478696 AHCTF1Q8WYP5 2266 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 TLN2Q9Y4G6 2542 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 F8P00451 2351 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 COL6A5A8TX70 2615 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 LY75O60449 1722 aa0.67□□□□□ -2.3
GARNL3-214ENST00000478696 DNAJC13O75165 2243 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 PLXNC1O60486 1568 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 USP9YO00507 2555 aaPredicted RBP0.66□□□□□ -2.3
GARNL3-214ENST00000478696 LAMA1P25391 3075 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 C5P01031 1676 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 NHSQ6T4R5 1651 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 MGAQ8IWI9 3026 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 CHD9Q3L8U1 2897 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 TRPM2O94759 1503 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 COX6A2Q02221 97 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 MYO7BQ6PIF6 2116 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 PLAC8Q9NZF1 115 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 CLTCL1P53675 1640 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 A0A0G2JMZ2 1700 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 TOGARAM1Q9Y4F4 1720 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 CRYBG1Q9Y4K1 1723 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 ATP7BP35670 1465 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 ERVK-7P63135 1459 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 ATMQ13315 3056 aa0.66□□□□□ -2.3
GARNL3-214ENST00000478696 GCC2Q8IWJ2 1684 aa0.65□□□□□ -2.3
GARNL3-214ENST00000478696 KDM3BQ7LBC6 1761 aa0.65□□□□□ -2.3
GARNL3-214ENST00000478696 HFM1A2PYH4 1435 aa0.65□□□□□ -2.3
GARNL3-214ENST00000478696 CLIP1P30622 1438 aa0.65□□□□□ -2.3
GARNL3-214ENST00000478696 SYCP2Q9BX26 1530 aa0.65□□□□□ -2.31
GARNL3-214ENST00000478696 EIF2AK4Q9P2K8 1649 aaKnown RBP0.65□□□□□ -2.31
GARNL3-214ENST00000478696 TJP1Q07157 1748 aa0.65□□□□□ -2.31
GARNL3-214ENST00000478696 MYMXA0A1B0GTQ4 84 aa0.65□□□□□ -2.31
GARNL3-214ENST00000478696 IQCF6A8MYZ5 107 aa0.65□□□□□ -2.31
GARNL3-214ENST00000478696 CNFNQ9BYD5 112 aa0.65□□□□□ -2.31
GARNL3-214ENST00000478696 VWFP04275 2813 aa0.65□□□□□ -2.31
GARNL3-214ENST00000478696 SPTBN1Q01082 2364 aaKnown RBP0.65□□□□□ -2.31
GARNL3-214ENST00000478696 DCHS2Q6V1P9 2916 aa0.65□□□□□ -2.31
GARNL3-214ENST00000478696 HIVEP3Q5T1R4 2406 aa0.65□□□□□ -2.31
GARNL3-214ENST00000478696 NBPF19A0A087WUL8 3843 aa0.65□□□□□ -2.31
GARNL3-214ENST00000478696 DDX60LQ5H9U9 1706 aaKnown RBP0.64□□□□□ -2.31
GARNL3-214ENST00000478696 HIVEP1P15822 2718 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms