RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 LINC00337Q8N6G1 96 aa16.16■□□□□ 0.18
CCM2-211ENST00000478582 C14orf144Q96I85 54 aa16.16■□□□□ 0.18
CCM2-211ENST00000478582 KRTAP4-16G5E9R7 235 aaPredicted RBP16.15■□□□□ 0.18
CCM2-211ENST00000478582 PRLHP81277 87 aa16.13■□□□□ 0.17
CCM2-211ENST00000478582 CBY1Q9Y3M2 126 aa16.12■□□□□ 0.17
CCM2-211ENST00000478582 SLC25A34Q6PIV7 304 aa16.11■□□□□ 0.17
CCM2-211ENST00000478582 TRAV23DV6A0A075B6W5 121 aa16.1■□□□□ 0.17
CCM2-211ENST00000478582 KRTAP1-4P0C5Y4 121 aa16.09■□□□□ 0.17
CCM2-211ENST00000478582 OR13C6PQ8NH95 151 aa16.09■□□□□ 0.17
CCM2-211ENST00000478582 HIGD1BQ9P298 99 aa16.09■□□□□ 0.17
CCM2-211ENST00000478582 ETDCA0A1B0GVM5 59 aa16.08■□□□□ 0.16
CCM2-211ENST00000478582 B5MCH6 92 aa16.05■□□□□ 0.16
CCM2-211ENST00000478582 ZNF73O43830 326 aaPredicted RBP16.05■□□□□ 0.16
CCM2-211ENST00000478582 HIST1H4GQ99525 98 aa16.05■□□□□ 0.16
CCM2-211ENST00000478582 KRTAP10-8P60410 259 aa16.04■□□□□ 0.16
CCM2-211ENST00000478582 C2orf91Q6ZV80 131 aa16.03■□□□□ 0.16
CCM2-211ENST00000478582 TNXBP22105 4242 aa16.02■□□□□ 0.16
CCM2-211ENST00000478582 HIGD2AQ9BW72 106 aa16.02■□□□□ 0.16
CCM2-211ENST00000478582 A4D1N5 150 aa16.01■□□□□ 0.15
CCM2-211ENST00000478582 HMCN2Q8NDA2 5059 aa16.01■□□□□ 0.15
CCM2-211ENST00000478582 TRAV13-2A0A0B4J235 113 aa16■□□□□ 0.15
CCM2-211ENST00000478582 Q6ZRX8 168 aa16■□□□□ 0.15
CCM2-211ENST00000478582 A6NDN8 102 aa15.98■□□□□ 0.15
CCM2-211ENST00000478582 HINT1P49773 126 aaPredicted RBP15.97■□□□□ 0.15
CCM2-211ENST00000478582 SMCR5Q8TEV8 140 aa15.97■□□□□ 0.15
CCM2-211ENST00000478582 TAL2Q16559 108 aa15.96■□□□□ 0.15
CCM2-211ENST00000478582 PRR26Q8N8Z3 221 aa15.96■□□□□ 0.15
CCM2-211ENST00000478582 Q9BRP9 147 aa15.94■□□□□ 0.14
CCM2-211ENST00000478582 C6orf99Q4VX62 202 aa15.92■□□□□ 0.14
CCM2-211ENST00000478582 TRBV7-6A0A0J9YX20 115 aa15.91■□□□□ 0.14
CCM2-211ENST00000478582 RPL13AP40429 203 aaKnown RBP15.91■□□□□ 0.14
CCM2-211ENST00000478582 FAM229BQ4G0N7 80 aa15.91■□□□□ 0.14
CCM2-211ENST00000478582 SPRR4Q96PI1 79 aa15.9■□□□□ 0.14
CCM2-211ENST00000478582 UQCR10Q9UDW1 63 aa15.9■□□□□ 0.14
CCM2-211ENST00000478582 ZNF706Q9Y5V0 76 aaPredicted RBP15.9■□□□□ 0.14
CCM2-211ENST00000478582 SMIM6P0DI80 62 aa15.89■□□□□ 0.13
CCM2-211ENST00000478582 ERC2-IT1O76042 136 aa15.88■□□□□ 0.13
CCM2-211ENST00000478582 CRYGAP11844 174 aa15.88■□□□□ 0.13
CCM2-211ENST00000478582 ELOF1P60002 83 aaKnown RBP15.88■□□□□ 0.13
CCM2-211ENST00000478582 CEND1Q8N111 149 aa15.88■□□□□ 0.13
CCM2-211ENST00000478582 ANAPC11Q9NYG5 84 aa15.88■□□□□ 0.13
CCM2-211ENST00000478582 LOC105371267A0A1B0GV96 52 aa15.87■□□□□ 0.13
CCM2-211ENST00000478582 COX7BP24311 80 aa15.87■□□□□ 0.13
CCM2-211ENST00000478582 SMIM11BQ8TCY0 68 aa15.87■□□□□ 0.13
CCM2-211ENST00000478582 A0A087X002 238 aa15.86■□□□□ 0.13
CCM2-211ENST00000478582 C12orf57Q99622 126 aa15.85■□□□□ 0.13
CCM2-211ENST00000478582 DHRS4-AS1Q9P1J3 65 aa15.84■□□□□ 0.13
CCM2-211ENST00000478582 A0A1B0GWB2 263 aa15.83■□□□□ 0.12
CCM2-211ENST00000478582 CFC1BP0CG36 223 aa15.83■□□□□ 0.12
CCM2-211ENST00000478582 CFC1P0CG37 223 aa15.83■□□□□ 0.12
CCM2-211ENST00000478582 HSD52Q0P140 79 aa15.81■□□□□ 0.12
CCM2-211ENST00000478582 A0A0B4J2C4 111 aa15.8■□□□□ 0.12
CCM2-211ENST00000478582 KRTAP13-2Q52LG2 175 aa15.8■□□□□ 0.12
CCM2-211ENST00000478582 LINC00483Q53H64 154 aa15.8■□□□□ 0.12
CCM2-211ENST00000478582 TMEM238LA0A1B0GVL6 79 aa15.79■□□□□ 0.12
CCM2-211ENST00000478582 A6NJY4 79 aa15.79■□□□□ 0.12
CCM2-211ENST00000478582 FXYD2P54710 66 aa15.77■□□□□ 0.12
CCM2-211ENST00000478582 RAB37Q96AX2 223 aa15.77■□□□□ 0.12
CCM2-211ENST00000478582 TYMSOSQ8TAI1 123 aa15.76■□□□□ 0.11
CCM2-211ENST00000478582 VAMP3Q15836 100 aa15.75■□□□□ 0.11
CCM2-211ENST00000478582 GAGE2AQ6NT46 116 aa15.75■□□□□ 0.11
CCM2-211ENST00000478582 UBR4Q5T4S7 5183 aa15.75■□□□□ 0.11
CCM2-211ENST00000478582 PRO1933Q9H354 126 aa15.74■□□□□ 0.11
CCM2-211ENST00000478582 ST20-AS1Q8NBB2 130 aa15.72■□□□□ 0.11
CCM2-211ENST00000478582 PRO1854Q9UHT4 67 aa15.7■□□□□ 0.1
CCM2-211ENST00000478582 C3orf22Q8N5N4 141 aa15.69■□□□□ 0.1
CCM2-211ENST00000478582 NHP2Q9NX24 153 aaKnown RBP15.69■□□□□ 0.1
CCM2-211ENST00000478582 SPRR1BP22528 89 aa15.68■□□□□ 0.1
CCM2-211ENST00000478582 BVES-AS1Q5T3Y7 98 aa15.68■□□□□ 0.1
CCM2-211ENST00000478582 H7C2G1 150 aa15.67■□□□□ 0.1
CCM2-211ENST00000478582 LINC00575Q6W349 94 aa15.66■□□□□ 0.1
CCM2-211ENST00000478582 SLC25A20O43772 301 aa15.63■□□□□ 0.09
CCM2-211ENST00000478582 IGLV5-48A0A075B6I7 105 aa15.59■□□□□ 0.09
CCM2-211ENST00000478582 Q1RN00 199 aa15.59■□□□□ 0.09
CCM2-211ENST00000478582 LINC00304Q8N9R0 145 aa15.59■□□□□ 0.09
CCM2-211ENST00000478582 TEX49A0A1B0GTD5 131 aa15.58■□□□□ 0.08
CCM2-211ENST00000478582 hADV29S1A0JD25 119 aa15.58■□□□□ 0.08
CCM2-211ENST00000478582 TSTD3H0UI37 97 aa15.58■□□□□ 0.08
CCM2-211ENST00000478582 LINC01547P58512 204 aaPredicted RBP15.58■□□□□ 0.08
CCM2-211ENST00000478582 H0YGX0 51 aa15.57■□□□□ 0.08
CCM2-211ENST00000478582 SSBP3-AS1Q7Z2R9 100 aa15.57■□□□□ 0.08
CCM2-211ENST00000478582 LRP2P98164 4655 aa15.56■□□□□ 0.08
CCM2-211ENST00000478582 IGLV9-49A0A0B4J1Y8 123 aa15.56■□□□□ 0.08
CCM2-211ENST00000478582 CTAG1AP78358 180 aa15.56■□□□□ 0.08
CCM2-211ENST00000478582 DEFB105AQ8NG35 78 aa15.56■□□□□ 0.08
CCM2-211ENST00000478582 K7ERJ3 54 aa15.55■□□□□ 0.08
CCM2-211ENST00000478582 MOBPQ13875 183 aa15.54■□□□□ 0.08
CCM2-211ENST00000478582 Q8NBF4 154 aa15.53■□□□□ 0.08
CCM2-211ENST00000478582 LAMTOR3Q9UHA4 124 aa15.53■□□□□ 0.08
CCM2-211ENST00000478582 M0R143 59 aa15.52■□□□□ 0.08
CCM2-211ENST00000478582 SPAG11AQ6PDA7 123 aa15.52■□□□□ 0.08
CCM2-211ENST00000478582 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.5■□□□□ 0.07
CCM2-211ENST00000478582 Q6ZQY7 126 aa15.5■□□□□ 0.07
CCM2-211ENST00000478582 SMIM29Q86T20 159 aa15.5■□□□□ 0.07
CCM2-211ENST00000478582 Q8N377 158 aa15.5■□□□□ 0.07
CCM2-211ENST00000478582 TRIAP1O43715 76 aa15.49■□□□□ 0.07
CCM2-211ENST00000478582 TSPAN13O95857 204 aa15.49■□□□□ 0.07
CCM2-211ENST00000478582 C9orf153Q5TBE3 101 aa15.48■□□□□ 0.07
CCM2-211ENST00000478582 SNCGO76070 127 aa15.47■□□□□ 0.07
CCM2-211ENST00000478582 C4orf48Q5BLP8 95 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms