RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 IGLV1-50A0A075B6I6 118 aa4.2□□□□□ -1.74
BRCA1-215ENST00000478531 H3BS24 57 aa4.2□□□□□ -1.74
BRCA1-215ENST00000478531 BCE1O60756 84 aa4.2□□□□□ -1.74
BRCA1-215ENST00000478531 RPL13AP40429 203 aaKnown RBP4.2□□□□□ -1.74
BRCA1-215ENST00000478531 UBE2AP49459 152 aa4.2□□□□□ -1.74
BRCA1-215ENST00000478531 FAM19A1Q7Z5A9 133 aa4.2□□□□□ -1.74
BRCA1-215ENST00000478531 H0Y9J4 135 aa4.19□□□□□ -1.74
BRCA1-215ENST00000478531 M0R378 163 aa4.19□□□□□ -1.74
BRCA1-215ENST00000478531 OCIAD2Q56VL3 154 aa4.19□□□□□ -1.74
BRCA1-215ENST00000478531 PCP2Q8IVA1 136 aa4.19□□□□□ -1.74
BRCA1-215ENST00000478531 SIGMAR1Q99720 223 aa4.19□□□□□ -1.74
BRCA1-215ENST00000478531 TMEM126AQ9H061 195 aa4.19□□□□□ -1.74
BRCA1-215ENST00000478531 M0R143 59 aa4.18□□□□□ -1.74
BRCA1-215ENST00000478531 ZNF861PO60384 105 aa4.18□□□□□ -1.74
BRCA1-215ENST00000478531 RPL28P46779 137 aaKnown RBP4.18□□□□□ -1.74
BRCA1-215ENST00000478531 SOSTDC1Q6X4U4 206 aa4.18□□□□□ -1.74
BRCA1-215ENST00000478531 LITAFQ99732 161 aa4.18□□□□□ -1.74
BRCA1-215ENST00000478531 SPANXB1Q9NS25 103 aaPredicted RBP4.18□□□□□ -1.74
BRCA1-215ENST00000478531 TIMM17BO60830 172 aa4.18□□□□□ -1.74
BRCA1-215ENST00000478531 PRLHP81277 87 aa4.18□□□□□ -1.74
BRCA1-215ENST00000478531 LOC107984156A0A0G2JMH3 177 aa4.17□□□□□ -1.74
BRCA1-215ENST00000478531 TRBV10-3A0A0K0K1G6 114 aa4.17□□□□□ -1.74
BRCA1-215ENST00000478531 ARL17AQ8IVW1 177 aa4.17□□□□□ -1.74
BRCA1-215ENST00000478531 LINC00308Q8TCZ7 52 aa4.17□□□□□ -1.74
BRCA1-215ENST00000478531 LINC01600Q96MT4 127 aa4.17□□□□□ -1.74
BRCA1-215ENST00000478531 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
BRCA1-215ENST00000478531 MT1HL1P0DM35 61 aa4.16□□□□□ -1.74
BRCA1-215ENST00000478531 UBE2V1Q13404 147 aa4.16□□□□□ -1.74
BRCA1-215ENST00000478531 S100A7L2Q5SY68 101 aa4.16□□□□□ -1.74
BRCA1-215ENST00000478531 PRYO14603 147 aa4.16□□□□□ -1.74
BRCA1-215ENST00000478531 NDUFC2O95298 119 aa4.16□□□□□ -1.74
BRCA1-215ENST00000478531 C4orf26Q17RF5 130 aa4.16□□□□□ -1.74
BRCA1-215ENST00000478531 SNHG12Q9BXW3 62 aa4.16□□□□□ -1.74
BRCA1-215ENST00000478531 SPANXCQ9NY87 97 aa4.16□□□□□ -1.74
BRCA1-215ENST00000478531 PRO0628Q9UI54 55 aa4.16□□□□□ -1.74
BRCA1-215ENST00000478531 TRBV10-2A0A0K0K1G8 114 aa4.15□□□□□ -1.74
BRCA1-215ENST00000478531 KRTAP13-1Q8IUC0 172 aa4.15□□□□□ -1.74
BRCA1-215ENST00000478531 OR13C6PQ8NH95 151 aa4.15□□□□□ -1.74
BRCA1-215ENST00000478531 SPANXDQ9BXN6 97 aa4.15□□□□□ -1.74
BRCA1-215ENST00000478531 KCNQ1DNQ9H478 68 aa4.15□□□□□ -1.74
BRCA1-215ENST00000478531 ETDCA0A1B0GVM5 59 aa4.14□□□□□ -1.75
BRCA1-215ENST00000478531 HIGD2AQ9BW72 106 aa4.14□□□□□ -1.75
BRCA1-215ENST00000478531 TRAV23DV6A0A075B6W5 121 aa4.14□□□□□ -1.75
BRCA1-215ENST00000478531 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
BRCA1-215ENST00000478531 PRR26Q8N8Z3 221 aa4.14□□□□□ -1.75
BRCA1-215ENST00000478531 COPS9Q8WXC6 57 aa4.14□□□□□ -1.75
BRCA1-215ENST00000478531 PAM16Q9Y3D7 125 aa4.14□□□□□ -1.75
BRCA1-215ENST00000478531 IGLV6-57P01721 117 aa4.13□□□□□ -1.75
BRCA1-215ENST00000478531 CD164Q04900 197 aa4.13□□□□□ -1.75
BRCA1-215ENST00000478531 VAMP8Q9BV40 100 aa4.13□□□□□ -1.75
BRCA1-215ENST00000478531 IFITM1P13164 125 aa4.13□□□□□ -1.75
BRCA1-215ENST00000478531 SPATA45Q537H7 98 aa4.13□□□□□ -1.75
BRCA1-215ENST00000478531 MUSTN1Q8IVN3 82 aa4.13□□□□□ -1.75
BRCA1-215ENST00000478531 LINC00337Q8N6G1 96 aa4.13□□□□□ -1.75
BRCA1-215ENST00000478531 ANAPC11Q9NYG5 84 aa4.13□□□□□ -1.75
BRCA1-215ENST00000478531 HMCN2Q8NDA2 5059 aa4.12□□□□□ -1.75
BRCA1-215ENST00000478531 COX8AP10176 69 aa4.12□□□□□ -1.75
BRCA1-215ENST00000478531 SPRR1AP35321 89 aa4.12□□□□□ -1.75
BRCA1-215ENST00000478531 JOSD1Q15040 202 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-215ENST00000478531 Q6ZVH6 145 aa4.12□□□□□ -1.75
BRCA1-215ENST00000478531 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
BRCA1-215ENST00000478531 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-215ENST00000478531 ZNF73O43830 326 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-215ENST00000478531 KRTAP10-8P60410 259 aa4.11□□□□□ -1.75
BRCA1-215ENST00000478531 PYY3Q5JQD4 70 aa4.11□□□□□ -1.75
BRCA1-215ENST00000478531 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
BRCA1-215ENST00000478531 A0A087X002 238 aa4.11□□□□□ -1.75
BRCA1-215ENST00000478531 B5MCH6 92 aa4.11□□□□□ -1.75
BRCA1-215ENST00000478531 A6NDN8 102 aa4.1□□□□□ -1.75
BRCA1-215ENST00000478531 Q6ZRX8 168 aa4.1□□□□□ -1.75
BRCA1-215ENST00000478531 SMCR5Q8TEV8 140 aa4.1□□□□□ -1.75
BRCA1-215ENST00000478531 HIST1H4GQ99525 98 aa4.1□□□□□ -1.75
BRCA1-215ENST00000478531 CRYGAP11844 174 aa4.09□□□□□ -1.75
BRCA1-215ENST00000478531 HINT1P49773 126 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-215ENST00000478531 C1orf195Q5TG92 126 aa4.09□□□□□ -1.75
BRCA1-215ENST00000478531 Q9BRP9 147 aa4.09□□□□□ -1.75
BRCA1-215ENST00000478531 SLC25A34Q6PIV7 304 aa4.09□□□□□ -1.76
BRCA1-215ENST00000478531 SPRR4Q96PI1 79 aa4.09□□□□□ -1.76
BRCA1-215ENST00000478531 ZNF706Q9Y5V0 76 aaPredicted RBP4.09□□□□□ -1.76
BRCA1-215ENST00000478531 ERC2-IT1O76042 136 aa4.08□□□□□ -1.76
BRCA1-215ENST00000478531 C6orf99Q4VX62 202 aa4.08□□□□□ -1.76
BRCA1-215ENST00000478531 COL5A1-AS1Q5SY13 56 aa4.08□□□□□ -1.76
BRCA1-215ENST00000478531 GAGE2AQ6NT46 116 aa4.08□□□□□ -1.76
BRCA1-215ENST00000478531 TYMSOSQ8TAI1 123 aa4.08□□□□□ -1.76
BRCA1-215ENST00000478531 TRAV13-2A0A0B4J235 113 aa4.07□□□□□ -1.76
BRCA1-215ENST00000478531 FAM229BQ4G0N7 80 aa4.07□□□□□ -1.76
BRCA1-215ENST00000478531 KRTAP13-2Q52LG2 175 aa4.07□□□□□ -1.76
BRCA1-215ENST00000478531 COX7BP24311 80 aa4.07□□□□□ -1.76
BRCA1-215ENST00000478531 ELOF1P60002 83 aaKnown RBP4.06□□□□□ -1.76
BRCA1-215ENST00000478531 C2orf91Q6ZV80 131 aa4.06□□□□□ -1.76
BRCA1-215ENST00000478531 C3orf22Q8N5N4 141 aa4.06□□□□□ -1.76
BRCA1-215ENST00000478531 A0A1B0GX51 115 aa4.05□□□□□ -1.76
BRCA1-215ENST00000478531 SMIM11BQ8TCY0 68 aa4.05□□□□□ -1.76
BRCA1-215ENST00000478531 PRO1933Q9H354 126 aa4.05□□□□□ -1.76
BRCA1-215ENST00000478531 HIGD1BQ9P298 99 aa4.05□□□□□ -1.76
BRCA1-215ENST00000478531 ST20-AS1Q8NBB2 130 aa4.05□□□□□ -1.76
BRCA1-215ENST00000478531 DHRS4-AS1Q9P1J3 65 aa4.05□□□□□ -1.76
BRCA1-215ENST00000478531 LRP2P98164 4655 aa4.05□□□□□ -1.76
BRCA1-215ENST00000478531 IGLV9-49A0A0B4J1Y8 123 aa4.04□□□□□ -1.76
BRCA1-215ENST00000478531 H7C2G1 150 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms