RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 DIRC1Q969H9 104 aa2.86□□□□□ -1.95
GPNMB-210ENST00000478451 KMT2BQ9UMN6 2715 aaPredicted RBP2.86□□□□□ -1.95
GPNMB-210ENST00000478451 ZNF462Q96JM2 2506 aa2.86□□□□□ -1.95
GPNMB-210ENST00000478451 POLQO75417 2590 aa2.86□□□□□ -1.95
GPNMB-210ENST00000478451 USP24Q9UPU5 2620 aa2.86□□□□□ -1.95
GPNMB-210ENST00000478451 ABCA12Q86UK0 2595 aa2.85□□□□□ -1.95
GPNMB-210ENST00000478451 FBN2P35556 2912 aa2.85□□□□□ -1.95
GPNMB-210ENST00000478451 TRAV7A0A075B6U4 112 aa2.85□□□□□ -1.95
GPNMB-210ENST00000478451 TRAV23DV6A0A075B6W5 121 aa2.85□□□□□ -1.95
GPNMB-210ENST00000478451 H3BNG1 76 aa2.85□□□□□ -1.95
GPNMB-210ENST00000478451 IGLV6-57P01721 117 aa2.85□□□□□ -1.95
GPNMB-210ENST00000478451 COX7BP24311 80 aa2.85□□□□□ -1.95
GPNMB-210ENST00000478451 CXCL6P80162 114 aa2.85□□□□□ -1.95
GPNMB-210ENST00000478451 Q6ZQT0 140 aa2.85□□□□□ -1.95
GPNMB-210ENST00000478451 UPK3BQ9BT76 320 aa2.85□□□□□ -1.95
GPNMB-210ENST00000478451 IGLV10-54A0A075B6I4 117 aa2.84□□□□□ -1.95
GPNMB-210ENST00000478451 A0A096LPF7 62 aa2.84□□□□□ -1.95
GPNMB-210ENST00000478451 LOC107984640A0A0U1RRK4 108 aa2.84□□□□□ -1.95
GPNMB-210ENST00000478451 NDUFC1O43677 76 aa2.84□□□□□ -1.95
GPNMB-210ENST00000478451 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.95
GPNMB-210ENST00000478451 DEFB135Q30KP9 77 aa2.84□□□□□ -1.95
GPNMB-210ENST00000478451 C5orf47Q569G3 176 aa2.84□□□□□ -1.95
GPNMB-210ENST00000478451 C3orf56Q8N813 242 aa2.84□□□□□ -1.95
GPNMB-210ENST00000478451 PRR34Q9NV39 138 aa2.84□□□□□ -1.95
GPNMB-210ENST00000478451 DHRS4-AS1Q9P1J3 65 aa2.84□□□□□ -1.95
GPNMB-210ENST00000478451 GCN1Q92616 2671 aaKnown RBP2.84□□□□□ -1.96
GPNMB-210ENST00000478451 PTPN13Q12923 2485 aa2.83□□□□□ -1.96
GPNMB-210ENST00000478451 JMJD1CQ15652 2540 aa2.83□□□□□ -1.96
GPNMB-210ENST00000478451 A0A087WVE0 104 aa2.83□□□□□ -1.96
GPNMB-210ENST00000478451 A0A1B0GW54 56 aa2.83□□□□□ -1.96
GPNMB-210ENST00000478451 M0R378 163 aa2.83□□□□□ -1.96
GPNMB-210ENST00000478451 ZNF73O43830 326 aaPredicted RBP2.83□□□□□ -1.96
GPNMB-210ENST00000478451 ELOF1P60002 83 aaKnown RBP2.83□□□□□ -1.96
GPNMB-210ENST00000478451 EGFEM1PQ0D2K5 195 aa2.83□□□□□ -1.96
GPNMB-210ENST00000478451 C9orf129Q5T035 196 aaKnown RBP2.83□□□□□ -1.96
GPNMB-210ENST00000478451 ENHOQ6UWT2 76 aa2.83□□□□□ -1.96
GPNMB-210ENST00000478451 Q6ZQY7 126 aa2.83□□□□□ -1.96
GPNMB-210ENST00000478451 NF1P21359 2839 aa2.83□□□□□ -1.96
GPNMB-210ENST00000478451 FAM236DA0A1B0GTK5 79 aa2.82□□□□□ -1.96
GPNMB-210ENST00000478451 J3QKU1 62 aa2.82□□□□□ -1.96
GPNMB-210ENST00000478451 FAM236CP0DP71 79 aa2.82□□□□□ -1.96
GPNMB-210ENST00000478451 SEC61GP60059 68 aa2.82□□□□□ -1.96
GPNMB-210ENST00000478451 PRR3P79522 188 aaKnown RBP2.82□□□□□ -1.96
GPNMB-210ENST00000478451 HAMPP81172 84 aa2.82□□□□□ -1.96
GPNMB-210ENST00000478451 C9orf116Q5BN46 136 aaPredicted RBP2.82□□□□□ -1.96
GPNMB-210ENST00000478451 UNQ6190/PRO20217Q6UXQ8 127 aa2.82□□□□□ -1.96
GPNMB-210ENST00000478451 FAM19A5Q7Z5A7 132 aaPredicted RBP2.82□□□□□ -1.96
GPNMB-210ENST00000478451 Q8NAQ8 132 aa2.82□□□□□ -1.96
GPNMB-210ENST00000478451 DPH3Q96FX2 82 aa2.82□□□□□ -1.96
GPNMB-210ENST00000478451 CAMK2N2Q96S95 79 aa2.82□□□□□ -1.96
GPNMB-210ENST00000478451 KLK12Q9UKR0 248 aa2.82□□□□□ -1.96
GPNMB-210ENST00000478451 TRBV7-4A0A0J9YYF1 115 aa2.81□□□□□ -1.96
GPNMB-210ENST00000478451 ERC2-IT1O76042 136 aa2.81□□□□□ -1.96
GPNMB-210ENST00000478451 HTN3P15516 51 aa2.81□□□□□ -1.96
GPNMB-210ENST00000478451 KLKP1Q107X0 134 aa2.81□□□□□ -1.96
GPNMB-210ENST00000478451 C6orf48Q9UBA6 75 aa2.81□□□□□ -1.96
GPNMB-210ENST00000478451 SERP1Q9Y6X1 66 aa2.81□□□□□ -1.96
GPNMB-210ENST00000478451 PDZD2O15018 2839 aa2.8□□□□□ -1.96
GPNMB-210ENST00000478451 HIGD2BQ4VC39 106 aa2.8□□□□□ -1.96
GPNMB-210ENST00000478451 FAM19A1Q7Z5A9 133 aa2.8□□□□□ -1.96
GPNMB-210ENST00000478451 C20orf197Q8N268 126 aa2.8□□□□□ -1.96
GPNMB-210ENST00000478451 NKAPP1Q8N9T2 125 aa2.8□□□□□ -1.96
GPNMB-210ENST00000478451 CELA1Q9UNI1 258 aa2.8□□□□□ -1.96
GPNMB-210ENST00000478451 CSMD2Q7Z408 3487 aa2.8□□□□□ -1.96
GPNMB-210ENST00000478451 TENM4Q6N022 2769 aa2.79□□□□□ -1.96
GPNMB-210ENST00000478451 NBPF19A0A087WUL8 3843 aa2.79□□□□□ -1.96
GPNMB-210ENST00000478451 SONP18583 2426 aaKnown RBP2.79□□□□□ -1.96
GPNMB-210ENST00000478451 DEFB4AO15263 64 aa2.79□□□□□ -1.96
GPNMB-210ENST00000478451 FUSP35637 526 aaKnown RBP eCLIP2.79□□□□□ -1.96
GPNMB-210ENST00000478451 NREPQ16612 68 aa2.79□□□□□ -1.96
GPNMB-210ENST00000478451 WFDC9Q8NEX5 89 aa2.79□□□□□ -1.96
GPNMB-210ENST00000478451 RMI2Q96E14 147 aa2.79□□□□□ -1.96
GPNMB-210ENST00000478451 C2CD3Q4AC94 2353 aa2.79□□□□□ -1.96
GPNMB-210ENST00000478451 NIPBLQ6KC79 2804 aaeCLIP2.78□□□□□ -1.96
GPNMB-210ENST00000478451 SYCNQ0VAF6 134 aa2.78□□□□□ -1.96
GPNMB-210ENST00000478451 LINC01556Q5JQF7 62 aa2.78□□□□□ -1.96
GPNMB-210ENST00000478451 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
GPNMB-210ENST00000478451 KPRPQ5T749 579 aaPredicted RBP2.78□□□□□ -1.96
GPNMB-210ENST00000478451 Q8NDZ9 215 aa2.78□□□□□ -1.96
GPNMB-210ENST00000478451 XAGE1AQ9HD64 81 aa2.78□□□□□ -1.96
GPNMB-210ENST00000478451 BAHCC1Q9P281 2608 aa2.78□□□□□ -1.96
GPNMB-210ENST00000478451 SETD2Q9BYW2 2564 aaPredicted RBP2.78□□□□□ -1.96
GPNMB-210ENST00000478451 ZFYVE26Q68DK2 2539 aa2.78□□□□□ -1.96
GPNMB-210ENST00000478451 HIVEP2P31629 2446 aa2.77□□□□□ -1.97
GPNMB-210ENST00000478451 SMIM26A0A096LP01 95 aa2.77□□□□□ -1.97
GPNMB-210ENST00000478451 BPY2O14599 106 aa2.77□□□□□ -1.97
GPNMB-210ENST00000478451 TLX1NBP0CAT3 122 aa2.77□□□□□ -1.97
GPNMB-210ENST00000478451 Q6ZR54 194 aa2.77□□□□□ -1.97
GPNMB-210ENST00000478451 Q6ZRU5 148 aa2.77□□□□□ -1.97
GPNMB-210ENST00000478451 WFDC10BQ8IUB3 73 aa2.77□□□□□ -1.97
GPNMB-210ENST00000478451 KCNQ1DNQ9H478 68 aa2.77□□□□□ -1.97
GPNMB-210ENST00000478451 CCDC168Q8NDH2 2452 aa2.77□□□□□ -1.97
GPNMB-210ENST00000478451 ANK3Q12955 4377 aaKnown RBP2.77□□□□□ -1.97
GPNMB-210ENST00000478451 IGKV2D-24A0A075B6R9 120 aa2.76□□□□□ -1.97
GPNMB-210ENST00000478451 ETDCA0A1B0GVM5 59 aa2.76□□□□□ -1.97
GPNMB-210ENST00000478451 F8WEM9 126 aa2.76□□□□□ -1.97
GPNMB-210ENST00000478451 H7BZZ5 65 aa2.76□□□□□ -1.97
GPNMB-210ENST00000478451 C15orf56Q8N910 161 aa2.76□□□□□ -1.97
GPNMB-210ENST00000478451 MRAPQ8TCY5 172 aa2.76□□□□□ -1.97
GPNMB-210ENST00000478451 CYSTM1Q9H1C7 97 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms