RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 EIF2AK4Q9P2K8 1649 aaKnown RBP1.05□□□□□ -2.24
SMARCA1-204ENST00000478420 DSTQ03001 7570 aaKnown RBP1.05□□□□□ -2.24
SMARCA1-204ENST00000478420 TP53AIP1Q9HCN2 124 aa1.05□□□□□ -2.24
SMARCA1-204ENST00000478420 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.05□□□□□ -2.243e-6■■■□□ 14.8
SMARCA1-204ENST00000478420 MYO9AB2RTY4 2548 aa1.05□□□□□ -2.24
SMARCA1-204ENST00000478420 WIZO95785 1651 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 POLR1AO95602 1720 aaPredicted RBP1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 TIAM2Q8IVF5 1701 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 BCORQ6W2J9 1755 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 F8P00451 2351 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 LRRK2Q5S007 2527 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 ATXN8Q156A1 80 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 GNG13Q9P2W3 67 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 GOLGB1Q14789 3259 aaKnown RBP1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 TIAM1Q13009 1591 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 SPTBN2O15020 2390 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 PREX2Q70Z35 1606 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 CICQ96RK0 1608 aaPredicted RBP1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 CEP290O15078 2479 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 PLCH1Q4KWH8 1693 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 PCLOQ9Y6V0 5065 aa1.04□□□□□ -2.24
SMARCA1-204ENST00000478420 LRRC37AA6NMS7 1700 aa1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 PARP4Q9UKK3 1724 aaKnown RBP1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 SPTBN5Q9NRC6 3674 aaKnown RBP1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 PIEZO2Q9H5I5 2752 aa1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 WDFY4Q6ZS81 3184 aa1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 SMIM5Q71RC9 77 aa1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 FAM103A1Q9BTL3 118 aaKnown RBP1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 KALRNO60229 2985 aa1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 ABCA10Q8WWZ4 1543 aa1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 KIF21BO75037 1637 aa1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 PREX1Q8TCU6 1659 aa1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 DOT1LQ8TEK3 1739 aa1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 FMN2Q9NZ56 1722 aa1.03□□□□□ -2.24
SMARCA1-204ENST00000478420 TPRP12270 2363 aaKnown RBP1.03□□□□□ -2.25
SMARCA1-204ENST00000478420 MKI67P46013 3256 aaKnown RBP1.02□□□□□ -2.25
SMARCA1-204ENST00000478420 A0A0D9SFI3 127 aa1.02□□□□□ -2.25
SMARCA1-204ENST00000478420 MUC3AQ02505 3323 aa1.02□□□□□ -2.25
SMARCA1-204ENST00000478420 USF3Q68DE3 2245 aa1.02□□□□□ -2.25
SMARCA1-204ENST00000478420 DEFB123Q8N688 67 aa1.02□□□□□ -2.25
SMARCA1-204ENST00000478420 KIAA0586Q9BVV6 1533 aa1.02□□□□□ -2.25
SMARCA1-204ENST00000478420 CNFNQ9BYD5 112 aa1.02□□□□□ -2.25
SMARCA1-204ENST00000478420 CRIPTQ9P021 101 aa1.02□□□□□ -2.25
SMARCA1-204ENST00000478420 PTPRQQ9UMZ3 2332 aa1.02□□□□□ -2.25
SMARCA1-204ENST00000478420 ACACBO00763 2458 aa1.01□□□□□ -2.25
SMARCA1-204ENST00000478420 PKDREJQ9NTG1 2253 aa1.01□□□□□ -2.25
SMARCA1-204ENST00000478420 NHSQ6T4R5 1651 aa1.01□□□□□ -2.25
SMARCA1-204ENST00000478420 SPTAN1Q13813 2472 aaKnown RBP1.01□□□□□ -2.25
SMARCA1-204ENST00000478420 SPTBN1Q01082 2364 aaKnown RBP1.01□□□□□ -2.25
SMARCA1-204ENST00000478420 CENPFP49454 3210 aa1.01□□□□□ -2.25
SMARCA1-204ENST00000478420 QSER1Q2KHR3 1735 aa1.01□□□□□ -2.25
SMARCA1-204ENST00000478420 CCDC168Q8NDH2 2452 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 C5orf42Q9H799 3197 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 CACNA1HO95180 2353 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 SPTY2D1-AS1A0A0U1RR47 76 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 CPSF4LA6NMK7 179 aaKnown RBP1□□□□□ -2.25
SMARCA1-204ENST00000478420 K7EQZ3 153 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 PIGYQ3MUY2 71 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 PRO0255Q9UI72 69 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 DNAH12Q6ZR08 3092 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 RICTORQ6R327 1708 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 PLXNC1O60486 1568 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 GLI2P10070 1586 aa1□□□□□ -2.25
SMARCA1-204ENST00000478420 CFAP46Q8IYW2 2715 aa0.99□□□□□ -2.25
SMARCA1-204ENST00000478420 CFAP54Q96N23 3096 aa0.99□□□□□ -2.25
SMARCA1-204ENST00000478420 NDUFA4O00483 81 aa0.99□□□□□ -2.25
SMARCA1-204ENST00000478420 PRB3Q04118 309 aaPredicted RBP0.99□□□□□ -2.25
SMARCA1-204ENST00000478420 KIF1AQ12756 1690 aa0.99□□□□□ -2.25
SMARCA1-204ENST00000478420 ABCA6Q8N139 1617 aa0.99□□□□□ -2.25
SMARCA1-204ENST00000478420 RNF17Q9BXT8 1623 aaKnown RBP0.99□□□□□ -2.25
SMARCA1-204ENST00000478420 BIVM-ERCC5R4GMW8 1640 aa0.99□□□□□ -2.25
SMARCA1-204ENST00000478420 IGSF10Q6WRI0 2623 aa0.99□□□□□ -2.25
SMARCA1-204ENST00000478420 GVINP1Q7Z2Y8 2422 aa0.98□□□□□ -2.25
SMARCA1-204ENST00000478420 FLNCQ14315 2725 aa0.98□□□□□ -2.25
SMARCA1-204ENST00000478420 CEP295Q9C0D2 2601 aa0.98□□□□□ -2.25
SMARCA1-204ENST00000478420 FBN2P35556 2912 aa0.98□□□□□ -2.25
SMARCA1-204ENST00000478420 POLQO75417 2590 aa0.98□□□□□ -2.25
SMARCA1-204ENST00000478420 COX6A2Q02221 97 aa0.98□□□□□ -2.25
SMARCA1-204ENST00000478420 ENHOQ6UWT2 76 aa0.98□□□□□ -2.25
SMARCA1-204ENST00000478420 DNHD1Q96M86 4753 aa0.98□□□□□ -2.25
SMARCA1-204ENST00000478420 NEBP20929 6669 aa0.98□□□□□ -2.25
SMARCA1-204ENST00000478420 SPTA1P02549 2419 aa0.98□□□□□ -2.25
SMARCA1-204ENST00000478420 NCOR2Q9Y618 2525 aa0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 ALS2Q96Q42 1657 aa0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 TEX15Q9BXT5 2789 aa0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 MEGF8Q7Z7M0 2845 aa0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 LINC01549A6NIU2 74 aa0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 RPL38P63173 70 aaKnown RBP0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 Q8IZM0 81 aa0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 A0A1B0GUL6 1792 aa0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 ANKHD1Q8IWZ3 2542 aaKnown RBP0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 BRCA2P51587 3418 aa0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 COL6A5A8TX70 2615 aa0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 STAB1Q9NY15 2570 aa0.97□□□□□ -2.25
SMARCA1-204ENST00000478420 MTORP42345 2549 aa0.96□□□□□ -2.26
SMARCA1-204ENST00000478420 NBEAL1Q6ZS30 2694 aa0.96□□□□□ -2.26
SMARCA1-204ENST00000478420 SPG11Q96JI7 2443 aa0.96□□□□□ -2.26
SMARCA1-204ENST00000478420 NRAPQ86VF7 1730 aa0.96□□□□□ -2.26
SMARCA1-204ENST00000478420 UBR5O95071 2799 aaPredicted RBP0.96□□□□□ -2.26
SMARCA1-204ENST00000478420 USMG5Q96IX5 58 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 1021.2 ms