RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 MAGI2Q86UL8 1455 aa-2.12□□□□□ -2.75
NCKAP1-204ENST00000477988 MIF4GDA9UHW6 222 aaKnown RBP-2.12□□□□□ -2.75
NCKAP1-204ENST00000477988 H3BQF6 201 aa-2.12□□□□□ -2.75
NCKAP1-204ENST00000477988 COX6CP09669 75 aa-2.12□□□□□ -2.75
NCKAP1-204ENST00000477988 COPZ1P61923 177 aa-2.12□□□□□ -2.75
NCKAP1-204ENST00000477988 HSD52Q0P140 79 aa-2.12□□□□□ -2.75
NCKAP1-204ENST00000477988 NMSQ5H8A3 153 aa-2.12□□□□□ -2.75
NCKAP1-204ENST00000477988 SMIM15Q7Z3B0 74 aa-2.12□□□□□ -2.75
NCKAP1-204ENST00000477988 DEFB107AQ8IZN7 70 aa-2.12□□□□□ -2.75
NCKAP1-204ENST00000477988 WIZO95785 1651 aa-2.12□□□□□ -2.75
NCKAP1-204ENST00000477988 CENPEQ02224 2701 aa-2.13□□□□□ -2.75
NCKAP1-204ENST00000477988 SPEGQ15772 3267 aa-2.13□□□□□ -2.75
NCKAP1-204ENST00000477988 PKD1L3Q7Z443 1732 aa-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 ABCC5O15440 1437 aa-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 ARMS2P0C7Q2 107 aa-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 TRAPPC2P0DI81 140 aa-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 TRAPPC2BP0DI82 140 aa-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 CKS1BP61024 79 aa-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 Q56UQ5 140 aa-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 KRTAP8-1Q8IUC2 63 aa-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 C8orf59Q8N0T1 100 aaPredicted RBP-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 TSTD1Q8NFU3 115 aa-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 MANBALQ9NQG1 85 aa-2.14□□□□□ -2.75
NCKAP1-204ENST00000477988 F6UZH7 168 aa-2.15□□□□□ -2.75
NCKAP1-204ENST00000477988 GNGT1P63211 74 aa-2.15□□□□□ -2.75
NCKAP1-204ENST00000477988 PSENENQ9NZ42 101 aa-2.15□□□□□ -2.75
NCKAP1-204ENST00000477988 PRO1854Q9UHT4 67 aa-2.15□□□□□ -2.75
NCKAP1-204ENST00000477988 CRYBG3Q68DQ2 2970 aa-2.15□□□□□ -2.75
NCKAP1-204ENST00000477988 SCAPERQ9BY12 1400 aa-2.16□□□□□ -2.75
NCKAP1-204ENST00000477988 NESP48681 1621 aa-2.16□□□□□ -2.75
NCKAP1-204ENST00000477988 DR1Q01658 176 aa-2.16□□□□□ -2.76
NCKAP1-204ENST00000477988 CATR1Q13166 79 aa-2.16□□□□□ -2.76
NCKAP1-204ENST00000477988 C12orf57Q99622 126 aa-2.16□□□□□ -2.76
NCKAP1-204ENST00000477988 UBE2D4Q9Y2X8 147 aa-2.16□□□□□ -2.76
NCKAP1-204ENST00000477988 LRRC9Q6ZRR7 1453 aa-2.16□□□□□ -2.76
NCKAP1-204ENST00000477988 FAM135AQ9P2D6 1515 aa-2.17□□□□□ -2.76
NCKAP1-204ENST00000477988 DEPDC5O75140 1603 aa-2.17□□□□□ -2.76
NCKAP1-204ENST00000477988 UBE2L5PA0A1B0GUS4 154 aa-2.17□□□□□ -2.76
NCKAP1-204ENST00000477988 GNG14A0A1W2PPG7 69 aa-2.17□□□□□ -2.76
NCKAP1-204ENST00000477988 K7EP13 123 aa-2.17□□□□□ -2.76
NCKAP1-204ENST00000477988 GNG11P61952 73 aa-2.17□□□□□ -2.76
NCKAP1-204ENST00000477988 UBE2L3P68036 154 aaKnown RBP-2.17□□□□□ -2.76
NCKAP1-204ENST00000477988 CRYBG1Q9Y4K1 1723 aa-2.17□□□□□ -2.76
NCKAP1-204ENST00000477988 CC2D2AQ9P2K1 1620 aa-2.17□□□□□ -2.76
NCKAP1-204ENST00000477988 DMDP11532 3685 aa-2.18□□□□□ -2.76
NCKAP1-204ENST00000477988 ABCC10Q5T3U5 1492 aa-2.18□□□□□ -2.76
NCKAP1-204ENST00000477988 C7orf77A4D0Y5 90 aa-2.18□□□□□ -2.76
NCKAP1-204ENST00000477988 MT1FP04733 61 aa-2.18□□□□□ -2.76
NCKAP1-204ENST00000477988 SMIM21Q3B7S5 101 aa-2.18□□□□□ -2.76
NCKAP1-204ENST00000477988 PSMG4Q5JS54 123 aa-2.18□□□□□ -2.76
NCKAP1-204ENST00000477988 DEFB4AO15263 64 aa-2.19□□□□□ -2.76
NCKAP1-204ENST00000477988 ASIPP42127 132 aa-2.19□□□□□ -2.76
NCKAP1-204ENST00000477988 WFDC9Q8NEX5 89 aa-2.19□□□□□ -2.76
NCKAP1-204ENST00000477988 MAGI3Q5TCQ9 1506 aa-2.19□□□□□ -2.76
NCKAP1-204ENST00000477988 ANKRD36CQ5JPF3 1778 aa-2.19□□□□□ -2.76
NCKAP1-204ENST00000477988 ZNF831Q5JPB2 1677 aa-2.19□□□□□ -2.76
NCKAP1-204ENST00000477988 CEP170BQ9Y4F5 1589 aaPredicted RBP-2.19□□□□□ -2.76
NCKAP1-204ENST00000477988 OOSP1A8MZH6 123 aa-2.2□□□□□ -2.76
NCKAP1-204ENST00000477988 ATP5EP56381 51 aaPredicted RBP-2.2□□□□□ -2.76
NCKAP1-204ENST00000477988 DEFB106AQ8N104 65 aa-2.2□□□□□ -2.76
NCKAP1-204ENST00000477988 UBR3Q6ZT12 1888 aa-2.2□□□□□ -2.76
NCKAP1-204ENST00000477988 APOC2P02655 101 aa-2.21□□□□□ -2.76
NCKAP1-204ENST00000477988 RGPD1P0DJD0 1748 aa-2.21□□□□□ -2.76
NCKAP1-204ENST00000477988 ARPC4P59998 168 aa-2.21□□□□□ -2.76
NCKAP1-204ENST00000477988 MEIG1Q5JSS6 88 aa-2.21□□□□□ -2.76
NCKAP1-204ENST00000477988 SUPT6HQ7KZ85 1726 aaKnown RBP-2.21□□□□□ -2.76
NCKAP1-204ENST00000477988 NAP1L6A6NFF2 107 aa-2.22□□□□□ -2.76
NCKAP1-204ENST00000477988 ANP32BQ92688 251 aaKnown RBP-2.22□□□□□ -2.76
NCKAP1-204ENST00000477988 PFDN5Q99471 154 aa-2.22□□□□□ -2.76
NCKAP1-204ENST00000477988 DPH3P1Q9H4G8 78 aa-2.22□□□□□ -2.76
NCKAP1-204ENST00000477988 ARHGAP5Q13017 1502 aa-2.22□□□□□ -2.77
NCKAP1-204ENST00000477988 LRRC7Q96NW7 1537 aa-2.22□□□□□ -2.77
NCKAP1-204ENST00000477988 POLR1AO95602 1720 aaPredicted RBP-2.22□□□□□ -2.77
NCKAP1-204ENST00000477988 SPHKAPQ2M3C7 1700 aa-2.22□□□□□ -2.77
NCKAP1-204ENST00000477988 COX7BP24311 80 aa-2.23□□□□□ -2.77
NCKAP1-204ENST00000477988 PRO3102Q9H379 93 aa-2.23□□□□□ -2.77
NCKAP1-204ENST00000477988 AP4S1Q9Y587 144 aa-2.23□□□□□ -2.77
NCKAP1-204ENST00000477988 NWD1Q149M9 1564 aa-2.23□□□□□ -2.77
NCKAP1-204ENST00000477988 KTN1Q86UP2 1357 aaKnown RBP-2.23□□□□□ -2.77
NCKAP1-204ENST00000477988 FYCO1Q9BQS8 1478 aa-2.24□□□□□ -2.77
NCKAP1-204ENST00000477988 CEP350Q5VT06 3117 aa-2.24□□□□□ -2.77
NCKAP1-204ENST00000477988 CRYM-AS1A6NIL9 109 aa-2.24□□□□□ -2.77
NCKAP1-204ENST00000477988 C3orf79P0CE67 100 aa-2.24□□□□□ -2.77
NCKAP1-204ENST00000477988 IGLC2P0DOY2 106 aa-2.24□□□□□ -2.77
NCKAP1-204ENST00000477988 IGLC3P0DOY3 106 aa-2.24□□□□□ -2.77
NCKAP1-204ENST00000477988 LINC00158P58513 81 aa-2.24□□□□□ -2.77
NCKAP1-204ENST00000477988 VAMP8Q9BV40 100 aa-2.24□□□□□ -2.77
NCKAP1-204ENST00000477988 ABCA3Q99758 1704 aa-2.25□□□□□ -2.77
NCKAP1-204ENST00000477988 TOGARAM1Q9Y4F4 1720 aa-2.25□□□□□ -2.77
NCKAP1-204ENST00000477988 ABCC2Q92887 1545 aa-2.25□□□□□ -2.77
NCKAP1-204ENST00000477988 TMEM262E9PQX1 116 aa-2.25□□□□□ -2.77
NCKAP1-204ENST00000477988 TNP1P09430 55 aa-2.25□□□□□ -2.77
NCKAP1-204ENST00000477988 CGREF1Q99674 301 aa-2.25□□□□□ -2.77
NCKAP1-204ENST00000477988 PARP4Q9UKK3 1724 aaKnown RBP-2.25□□□□□ -2.77
NCKAP1-204ENST00000477988 CFAP54Q96N23 3096 aa-2.26□□□□□ -2.77
NCKAP1-204ENST00000477988 WDFY3Q8IZQ1 3526 aa-2.26□□□□□ -2.77
NCKAP1-204ENST00000477988 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.26□□□□□ -2.77
NCKAP1-204ENST00000477988 C1orf54Q8WWF1 131 aa-2.26□□□□□ -2.77
NCKAP1-204ENST00000477988 LYNX1G3V0Z9 82 aa-2.27□□□□□ -2.77
NCKAP1-204ENST00000477988 RPS29P62273 56 aaKnown RBP-2.27□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms